ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags10d04 |
|---|---|
| Clone Library Name | barley_pub |
>GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15)| (AtGPAT6) Length = 501 Score = 198 bits (504), Expect(2) = 4e-57 Identities = 93/148 (62%), Positives = 117/148 (79%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 GTLL S +AFPYY LVALEAG PFVY+TY+ SE+LAI+ V+I+ AGL Sbjct: 32 GTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYLTYLTISETLAINVFVFITFAGL 91 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITASPRIMVEPFAREFLGADRVV 362 K+R +E+ RSVLP+FYA+DV P++WR+F +FGKRYIITASPRIMVEPF + FLG D+V+ Sbjct: 92 KIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYIITASPRIMVEPFVKTFLGVDKVL 151 Query: 363 GTELEVGKSGKATGFMVKPGVLVGEHKK 446 GTELEV KSG+ATGF KPG+LVG++K+ Sbjct: 152 GTELEVSKSGRATGFTRKPGILVGQYKR 179 Score = 42.7 bits (99), Expect(2) = 4e-57 Identities = 18/33 (54%), Positives = 23/33 (69%) Frame = +1 Query: 466 LGDAVPDVGMGDRATDFNFMSICKEAYLVTSRK 564 L +PD+G+GD TD +FMSICKE Y+V K Sbjct: 189 LASDLPDLGLGDSKTDHDFMSICKEGYMVPRTK 221
>GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransferase 8 (EC| 2.3.1.15) Length = 500 Score = 156 bits (394), Expect(2) = 6e-46 Identities = 75/149 (50%), Positives = 109/149 (73%), Gaps = 1/149 (0%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 GTLL S ++FPY++LVA+EAG PFV ++Y+F SESL I L++IS AGL Sbjct: 30 GTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPFVIISYLFVSESLGIQILIFISFAGL 89 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITASPRIMVEPFAREFLGADRVV 362 K+R IE+ +R+VLP+FYA DV +S+ VF ++ ++TA+P +MVE F +++LG D+V+ Sbjct: 90 KIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRKVVVTANPIVMVEAFVKDYLGGDKVL 149 Query: 363 GTELEVG-KSGKATGFMVKPGVLVGEHKK 446 GTE+EV K+ +ATGF+ KPGVLVG+ K+ Sbjct: 150 GTEIEVNPKTNRATGFVKKPGVLVGDLKR 178 Score = 47.8 bits (112), Expect(2) = 6e-46 Identities = 18/37 (48%), Positives = 29/37 (78%) Frame = +1 Query: 454 VVKELGDAVPDVGMGDRATDFNFMSICKEAYLVTSRK 564 ++KE G+ PD+G+GDR +D +FMS+CK+ Y+V + K Sbjct: 181 ILKEFGNESPDLGLGDRTSDHDFMSLCKKGYMVHATK 217
>GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15)| (AtGPAT4) Length = 503 Score = 150 bits (378), Expect(2) = 4e-45 Identities = 75/150 (50%), Positives = 108/150 (72%), Gaps = 2/150 (1%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 GTLL S ++FPY++LVA+EAG P V + Y+F SESL I L++IS AG+ Sbjct: 30 GTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPIVIIAYLFVSESLGIQILIFISFAGI 89 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKR-YIITASPRIMVEPFAREFLGADRV 359 K+++IE+ +R+VL +FYA DV +S+ VF KR ++TA+P +MVEPF +++LG D+V Sbjct: 90 KIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKRKVVVTANPIVMVEPFVKDYLGGDKV 149 Query: 360 VGTELEVG-KSGKATGFMVKPGVLVGEHKK 446 +GTE+EV K+ KATGF+ KPGVLVG+ K+ Sbjct: 150 LGTEIEVNPKTMKATGFVKKPGVLVGDLKR 179 Score = 51.2 bits (121), Expect(2) = 4e-45 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +1 Query: 454 VVKELGDAVPDVGMGDRATDFNFMSICKEAYLVTSRK 564 ++KE GD PD+G+GDR +D +FMSICKE Y+V K Sbjct: 182 ILKEFGDDSPDLGLGDRTSDHDFMSICKEGYMVHETK 218
>GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15)| (AtGPAT5) Length = 502 Score = 112 bits (281), Expect = 6e-25 Identities = 55/136 (40%), Positives = 84/136 (61%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 GT+L+++++F Y++LVA EA P + + +F ++ A+ ++++ GL Sbjct: 19 GTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAALKLKIFVATVGL 78 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITASPRIMVEPFAREFLGADRVV 362 + IE AR+VLPKFY DV ++WRVF S KR ++T PR+MVE FA+E L AD V+ Sbjct: 79 REPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVERFAKEHLRADEVI 138 Query: 363 GTELEVGKSGKATGFM 410 GTEL V + G TG + Sbjct: 139 GTELIVNRFGFVTGLI 154
>GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransferase 7 (EC| 2.3.1.15) (AtGPAT7) Length = 500 Score = 107 bits (268), Expect = 2e-23 Identities = 52/141 (36%), Positives = 82/141 (58%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 GTLL++ F Y++LVA EA P + + + + ++ +++++ AGL Sbjct: 17 GTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLMIFVATAGL 76 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITASPRIMVEPFAREFLGADRVV 362 IE AR+VLPKF+ D+ ++WR F S KR ++T PR+MVE FA++ L AD V+ Sbjct: 77 HESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKDHLSADEVI 136 Query: 363 GTELEVGKSGKATGFMVKPGV 425 GTE+ V + G ATG + + V Sbjct: 137 GTEIVVNRFGYATGLIQETNV 157
>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.15) (AtGPAT2) Length = 530 Score = 79.3 bits (194), Expect = 7e-15 Identities = 41/126 (32%), Positives = 75/126 (59%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 G LL+S++ FPY+++VA EAG PF+ + S + + T+V +S G+ Sbjct: 59 GALLKSNSLFPYFMVVAFEAGGVIRSLFLLVLYPFISL----MSYEMGLKTMVMLSFFGV 114 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITASPRIMVEPFAREFLGADRVV 362 K S + +SVLPK++ +DV E ++V + GKR ++ P++M++ F R++L + VV Sbjct: 115 KKESFRVG-KSVLPKYFLEDVGLEMFQVLKRGGKRVAVSDLPQVMIDVFLRDYLEIEVVV 173 Query: 363 GTELEV 380 G ++++ Sbjct: 174 GRDMKM 179
>GPAT1_ARATH (Q9SHJ5) Glycerol-3-phosphate acyltransferase 1 (EC 2.3.1.15)| (AtGPAT1) Length = 585 Score = 72.0 bits (175), Expect(2) = 3e-14 Identities = 40/132 (30%), Positives = 75/132 (56%), Gaps = 7/132 (5%) Frame = +3 Query: 3 GTLLRSSNA------FPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVY 164 G LLR ++ FPY++LVA E G F++ + + L + Sbjct: 112 GVLLRQHSSKHFHTFFPYFMLVAFEGGSIIRAILLLLSCSFLWT----LQQETKLRVLSF 167 Query: 165 ISVAGLKVRSIEMAARSVLPKFYAQDVHPESWRVF-RSFGKRYIITASPRIMVEPFAREF 341 I+ +GL+V+ ++ +RSVLPKF+ ++++ + + ++ R+ + + T+ P+++VE F RE Sbjct: 168 ITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKVVFTSLPQVLVERFLREH 227 Query: 342 LGADRVVGTELE 377 L AD V+GT+L+ Sbjct: 228 LNADDVIGTKLQ 239 Score = 25.4 bits (54), Expect(2) = 3e-14 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%) Frame = +1 Query: 481 PDVGMGDRAT--DFNFMSICKEAY 546 P +G+G ++ D F+SICKEAY Sbjct: 276 PALGIGSSSSPQDHIFISICKEAY 299
>GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransferase 3 (EC| 2.3.1.15) (AtGPAT3) Length = 520 Score = 75.9 bits (185), Expect = 8e-14 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Frame = +3 Query: 3 GTLLRSSNAFPYYLLVALEAGXXXXXXXXXXXXPFVYVTYIFFSESLAISTLVYISVAGL 182 G LL+S + FPY++LVA EAG P + + S + + +V +S G+ Sbjct: 53 GALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLISL----MSHEMGVKVMVMVSFFGI 108 Query: 183 KVRSIEMAARSVLPKFYAQDVHPESWRVFRSFGKRYIITAS-PRIMVEPFAREFLGADRV 359 K A R+VLPK++ +DV E + V + GK+ ++ P++M+E F R++L D V Sbjct: 109 KKEGFR-AGRAVLPKYFLEDVGLEMFEVLKRGGKKIGVSDDLPQVMIEGFLRDYLEIDVV 167 Query: 360 VGTELEV 380 VG E++V Sbjct: 168 VGREMKV 174
>CICA_CAUCR (O87707) Protein cicA| Length = 222 Score = 48.5 bits (114), Expect = 1e-05 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Frame = +3 Query: 177 GLKVRSIEMAARSVLPKFYAQDVHPES---WRVFRSFG-KRYIITASPRIMVEPFAREFL 344 G V IE AR+ F + P++ WR +R+ G K I+TASP ++V PFAR L Sbjct: 88 GATVAQIENDARAFAEAFAPSLLRPDAVAVWRGWRAKGAKMVIVTASPDLIVAPFARG-L 146 Query: 345 GADRVVGTELEVGKSGKATG 404 GAD ++GT L G+ G Sbjct: 147 GADLLIGTRLRCSDDGRILG 166
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 39.3 bits (90), Expect = 0.008 Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Frame = -1 Query: 422 PGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAGRDDVPLAEGP-EHPPALRV 246 P +HHEP G HH G E +P +HH+PG P+ P EH P + Sbjct: 275 PPMHHEP----GEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 329 Query: 245 DILRVELGQHRPRRHLDAPHLEPGHGDVHQGADGQRLGEEDVGH 114 H P H+ P + + H+G + R G ED H Sbjct: 330 --------HHEPGEHMPPPPFKHHELEEHEGPEHHR-GPEDKEH 364 Score = 35.8 bits (81), Expect = 0.088 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 5/88 (5%) Frame = -1 Query: 422 PGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAGRDDVPLAEGP-EH--PPAL 252 P +HHEP G HH G E +P +HH+PG P+ P EH PP + Sbjct: 236 PPMHHEP----GEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 290 Query: 251 RVDILRVELGQHRPRRHLDAP--HLEPG 174 H P H+ P H EPG Sbjct: 291 ----------HHEPGEHMPPPPMHHEPG 308 Score = 35.4 bits (80), Expect = 0.11 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Frame = -1 Query: 431 DEHPGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAGRDDVPLAEGP-EH--P 261 DE P HHE D + AHH G E +P +HH PG P+ P EH P Sbjct: 182 DERPK-HHEFDD----EDREFPAHHEPG-EHMPPPPMHHKPGEHMPPPPMHHEPGEHMPP 235 Query: 260 PALRVDILRVELGQHRPRRHLDAP--HLEPG 174 P + H P H+ P H EPG Sbjct: 236 PPM----------HHEPGEHMPPPPMHHEPG 256 Score = 34.3 bits (77), Expect = 0.26 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 5/88 (5%) Frame = -1 Query: 422 PGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAGRDDVPLAEGP-EH--PPAL 252 P +HH+P G HH G E +P +HH+PG P+ P EH PP + Sbjct: 210 PPMHHKP----GEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264 Query: 251 RVDILRVELGQHRPRRHLDAP--HLEPG 174 H P H+ P H EPG Sbjct: 265 ----------HHEPGEHMPPPPMHHEPG 282
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 33.9 bits (76), Expect = 0.33 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = -1 Query: 419 GLHHEP--RGLAGLADLQLRAHHPVGTEELPG----EGLHHDPGAGRDDVPLAEGPEHPP 258 GL +P RG +G+ LQ A P+G + LPG GL PG GR P GP PP Sbjct: 451 GLPGQPGLRGPSGIPGLQGPAG-PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPP 509 Query: 257 AL 252 + Sbjct: 510 GV 511
>IMD_STRCN (O33611) Inhibition of morphological differentiation protein| Length = 277 Score = 33.5 bits (75), Expect = 0.44 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = +3 Query: 291 IITASPRIMVEPFAREFLGADRVVGTELEVGKSGKATG 404 I++ S +VEP E LGADRVV T + VG G TG Sbjct: 122 IVSTSGAEVVEPIG-ELLGADRVVATRMVVGDDGCFTG 158
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 32.7 bits (73), Expect = 0.74 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Frame = -1 Query: 419 GLHHEP--RGLAGLADLQLRAHHPVGTEELPG----EGLHHDPGAGRDDVPLAEGPEHPP 258 GL +P RG +G+ LQ A P+G + LPG GL PG G+ P + GP PP Sbjct: 447 GLPGQPGLRGPSGIPGLQGPAG-PIGPQGLPGLKGEPGLPGPPGEGKVGEPGSAGPTGPP 505 Query: 257 AL 252 + Sbjct: 506 GV 507
>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X| Length = 462 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = +2 Query: 182 QGEEHRDGGAVGAAQVLRAGCPPGELEGVQVLRQAVHHHGQPQDH 316 QG H GG G A GCP + + A H HG DH Sbjct: 41 QGHGHAHGGH-GHAHDADGGCPYAKAAAAEAATAAAHDHGHAHDH 84
>MMAA_MOUSE (Q8C7H1) Methylmalonic aciduria type A homolog, mitochondrial| precursor Length = 415 Score = 30.0 bits (66), Expect = 4.8 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Frame = -1 Query: 557 DVTR*ASLHMDMKLKSVALSPMPTSGTASPSSLTTGLLLVLAD---------EHPGLHHE 405 D TR L DM + + P PTSGT + TT +VL + E G+ Sbjct: 190 DKTRMIELSRDM---NAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQS 246 Query: 404 PRGLAGLADLQLRAHHPVGTEELPG 330 +A + D+ + P G +EL G Sbjct: 247 EFAVADMVDMFVLLLPPAGGDELQG 271
>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 105 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -1 Query: 335 PGEGLHHDPGAGRDDVPLAEGPEHPPALRVDILRVELGQHRPRR 204 P EG H PG + +G E P D R G HR RR Sbjct: 9 PSEGPHQGPGQDHEREEQGQGQELSPERVEDYGRTHRGHHRHRR 52
>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) (Chondroitin sulfate proteoglycan core protein 1) [Contains: Aggrecan core protein 2] Length = 2415 Score = 29.6 bits (65), Expect = 6.3 Identities = 26/80 (32%), Positives = 31/80 (38%) Frame = -1 Query: 509 VALSPMPTSGTASPSSLTTGLLLVLADEHPGLHHEPRGLAGLADLQLRAHHPVGTEELPG 330 VA P+ TA PS TT +L + EP A+ PVGT LPG Sbjct: 708 VAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEP------------AYTPVGTSPLPG 755 Query: 329 EGLHHDPGAGRDDVPLAEGP 270 L P G + EGP Sbjct: 756 I-LPTWPPTGAETEESTEGP 774
>Y938_SYNP6 (P05676) Hypothetical serine protease syc0938_d (EC 3.4.21.-)| Length = 406 Score = 29.6 bits (65), Expect = 6.3 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 19/119 (15%) Frame = +3 Query: 132 SESLAISTLVYISVAGLKVRS-------IEMA----ARSVLPK-----FYAQDVHPESWR 263 S +LAIS V ++V GL+ R +E+A A + P F A V Sbjct: 18 SHTLAISLGVLVTVGGLQARPSLAQAAPVEIAQATPANTAAPNSNPDSFVAAAVRQIGPA 77 Query: 264 VFRSFGKRYIITASPRIMVEPFAREFLGAD---RVVGTELEVGKSGKATGFMVKPGVLV 431 V R +R + + + +PF REF G+D V + + G+ +GF+V L+ Sbjct: 78 VVRIDTERTVTRRAAPMFDDPFFREFFGSDFFGNVNPPARQEVQRGQGSGFVVDGNGLI 136
>KLF17_MOUSE (Q8CFA7) Krueppel-like factor 17 (Zinc finger protein 393) (Germ| cell-specific zinc finger protein) Length = 341 Score = 29.6 bits (65), Expect = 6.3 Identities = 23/83 (27%), Positives = 33/83 (39%) Frame = -1 Query: 497 PMPTSGTASPSSLTTGLLLVLADEHPGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLH 318 PMP + A+ SL G+LLV G H +A D L + +P E LP Sbjct: 148 PMPPTVPATTGSLKHGILLVPGMASAGTH----AVAPFMDQMLHSINPCNPEMLPARFQQ 203 Query: 317 HDPGAGRDDVPLAEGPEHPPALR 249 P +D + + P +R Sbjct: 204 LLPLDSQDSLVTESNTQEEPFVR 226
>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)| Length = 398 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 281 QAVHHHGQPQDHGGAL 328 +A+HH PQDHGGAL Sbjct: 13 RAIHHGYDPQDHGGAL 28
>LGR4_HUMAN (Q9BXB1) Leucine-rich repeat-containing G-protein coupled receptor| 4 precursor (G-protein coupled receptor 48) Length = 951 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = -1 Query: 401 RGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAGRDDVPLAEGPEHP 261 RGL+ L L+L A+H E EGL DD L E P HP Sbjct: 126 RGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHP 172
>RL32_THEFY (Q47S79) 50S ribosomal protein L32| Length = 58 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 473 TRCQTSAWATGPPISTSCPYARKPTL 550 TR + S W P+ TSCP R P L Sbjct: 13 TRVRRSQWKAARPLLTSCPRCRDPKL 38
>PRM2_RAT (P11248) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 104 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/50 (32%), Positives = 18/50 (36%) Frame = -1 Query: 335 PGEGLHHDPGAGRDDVPLAEGPEHPPALRVDILRVELGQHRPRRHLDAPH 186 P EG H PG + +G E P D R E G H R H Sbjct: 9 PSEGQHQGPGQDHEREEQGQGQELSPERVEDYGRTERGHHHRHRRCKRLH 58
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 29.3 bits (64), Expect = 8.2 Identities = 24/75 (32%), Positives = 32/75 (42%) Frame = -1 Query: 479 TASPSSLTTGLLLVLADEHPGLHHEPRGLAGLADLQLRAHHPVGTEELPGEGLHHDPGAG 300 T PSS G E L P G A + D+ HP G+++LP G H PG Sbjct: 6971 TPRPSSEACG-------EAQRLPSAPSGGAPIRDMG----HPQGSKQLPSTGGH--PGTA 7017 Query: 299 RDDVPLAEGPEHPPA 255 + + P + P PA Sbjct: 7018 QPERPSPDSPWGQPA 7032
>TIG_BURPS (Q63V42) Trigger factor (TF)| Length = 449 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 161 VHLRGRAQGEEHRDGGAVGAAQ 226 VH R +G EH DGGA AAQ Sbjct: 150 VHFHARGEGGEHGDGGADTAAQ 171
>TIG_BURMA (Q62JK6) Trigger factor (TF)| Length = 449 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 161 VHLRGRAQGEEHRDGGAVGAAQ 226 VH R +G EH DGGA AAQ Sbjct: 150 VHFHARGEGGEHGDGGADTAAQ 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.128 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,231,769 Number of Sequences: 219361 Number of extensions: 1349795 Number of successful extensions: 4903 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4887 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
