| Clone Name | bags10d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 573 bits (289), Expect = e-160 Identities = 457/513 (89%) Strand = Plus / Plus Query: 79 ccagatccacgcgtcggatccgttgttccacgagtccttcgacgagggcttcgaggggag 138 |||||||| ||| || |||||| ||||| | ||| | ||||||||| ||||||||||||| Sbjct: 54 ccagatccgcgcctccgatccgctgttctatgagccgttcgacgagagcttcgaggggag 113 Query: 139 ctggatcgtctccggcaaggaagagtactcaggtgtatggaagcacgagaagagtgatgg 198 ||| | ||||||| ||||| || ||| |||||||||||||||||| ||||||||||| Sbjct: 114 gtgggttctctccgggaaggacgactacaaaggtgtatggaagcacgaaaagagtgatgg 173 Query: 199 ccatgaagactatggtctccttgttagcgagccagccaggaaatatgccatagtcaaaga 258 |||||||||||||| || |||||||| ||| |||| ||||||||||||| |||| || Sbjct: 174 acatgaagactatggcctgcttgttagtgagaaggccaagaaatatgccataatcaagga 233 Query: 259 gcttgatagccctgttactttgaaggatgggacagttgtcctgcagttcgaagtgaggct 318 ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 234 gcttgatgagcctgttactttgaaggatgggactgttgtcctgcagtttgaagtgaggct 293 Query: 319 tcagaatggcctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggctgg 378 |||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||| Sbjct: 294 tcagaatggccttgagtgtggaggtgcatatcttaagtacattcgtcctcaggatgctgc 353 Query: 379 atgggatgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgacaa 438 ||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 354 atgggatgccaaggagtttgataatgagactccttacactattatgtttggtcctgacaa 413 Query: 439 atgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggcaa 498 |||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 414 atgtggatcaactaacaaggtgcatttcatccttaagcacaagaaccccaagactggcaa 473 Query: 499 atatgttgaacatcacctcaagtccccaccctctgtcccatatgacaagctctctcatgt 558 ||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||| Sbjct: 474 gtatgttgaacaccacctcaagttcccaccttctgtcccatatgataagctctctcatgt 533 Query: 559 ctacacggctatcttgaagccggataacgaggt 591 ||||||||||||||||||||| ||||| ||||| Sbjct: 534 ctacacggctatcttgaagcctgataatgaggt 566
>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full insert sequence Length = 2059 Score = 573 bits (289), Expect = e-160 Identities = 457/513 (89%) Strand = Plus / Plus Query: 79 ccagatccacgcgtcggatccgttgttccacgagtccttcgacgagggcttcgaggggag 138 |||||||| ||| || |||||| ||||| | ||| | ||||||||| ||||||||||||| Sbjct: 160 ccagatccgcgcctccgatccgctgttctatgagccgttcgacgagagcttcgaggggag 219 Query: 139 ctggatcgtctccggcaaggaagagtactcaggtgtatggaagcacgagaagagtgatgg 198 ||| | ||||||| ||||| || ||| |||||||||||||||||| ||||||||||| Sbjct: 220 gtgggttctctccgggaaggacgactacaaaggtgtatggaagcacgaaaagagtgatgg 279 Query: 199 ccatgaagactatggtctccttgttagcgagccagccaggaaatatgccatagtcaaaga 258 |||||||||||||| || |||||||| ||| |||| ||||||||||||| |||| || Sbjct: 280 acatgaagactatggcctgcttgttagtgagaaggccaagaaatatgccataatcaagga 339 Query: 259 gcttgatagccctgttactttgaaggatgggacagttgtcctgcagttcgaagtgaggct 318 ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 340 gcttgatgagcctgttactttgaaggatgggactgttgtcctgcagtttgaagtgaggct 399 Query: 319 tcagaatggcctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggctgg 378 |||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||| Sbjct: 400 tcagaatggccttgagtgtggaggtgcatatcttaagtacattcgtcctcaggatgctgc 459 Query: 379 atgggatgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgacaa 438 ||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 460 atgggatgccaaggagtttgataatgagactccttacactattatgtttggtcctgacaa 519 Query: 439 atgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggcaa 498 |||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 520 atgtggatcaactaacaaggtgcatttcatccttaagcacaagaaccccaagactggcaa 579 Query: 499 atatgttgaacatcacctcaagtccccaccctctgtcccatatgacaagctctctcatgt 558 ||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||| Sbjct: 580 gtatgttgaacaccacctcaagttcccaccttctgtcccatatgataagctctctcatgt 639 Query: 559 ctacacggctatcttgaagccggataacgaggt 591 ||||||||||||||||||||| ||||| ||||| Sbjct: 640 ctacacggctatcttgaagcctgataatgaggt 672
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 539 bits (272), Expect = e-150 Identities = 386/424 (91%) Strand = Plus / Minus Query: 168 caggtgtatggaagcacgagaagagtgatggccatgaagactatggtctccttgttagcg 227 ||||||||||||||||||| ||||||||||| |||||||||||||| || |||||||| | Sbjct: 78804 caggtgtatggaagcacgaaaagagtgatggacatgaagactatggcctgcttgttagtg 78745 Query: 228 agccagccaggaaatatgccatagtcaaagagcttgatagccctgttactttgaaggatg 287 || |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 78744 agaaggccaagaaatatgccataatcaaggagcttgatgagcctgttactttgaaggatg 78685 Query: 288 ggacagttgtcctgcagttcgaagtgaggcttcagaatggcctcgagtgtggaggtgctt 347 |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| | Sbjct: 78684 ggactgttgtcctgcagtttgaagtgaggcttcagaatggccttgagtgtggaggtgcat 78625 Query: 348 accttaagtacattcgccctcaggaggctggatgggatgccaaggaatttgacaatgaca 407 | |||||||||||||| |||||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 78624 atcttaagtacattcgtcctcaggatgctgcatgggatgccaaggagtttgataatgaga 78565 Query: 408 ctccttacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttca 467 |||||||||| |||||||||||||||||||||||||| ||||| |||||||| || |||| Sbjct: 78564 ctccttacactattatgtttggtcctgacaaatgtggatcaactaacaaggtgcatttca 78505 Query: 468 tcctgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccac 527 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 78504 tccttaagcacaagaaccccaagactggcaagtatgttgaacaccacctcaagttcccac 78445 Query: 528 cctctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggataacg 587 | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 78444 cttctgtcccatatgataagctctctcatgtctacacggctatcttgaagcctgataatg 78385 Query: 588 aggt 591 |||| Sbjct: 78384 aggt 78381 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 ttcgacgagggcttcgaggggagctggatcgtctccggcaagga 159 ||||||||| ||||||||||||| ||| | ||||||| ||||| Sbjct: 79801 ttcgacgagagcttcgaggggaggtgggttctctccgggaagga 79758
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 539 bits (272), Expect = e-150 Identities = 386/424 (91%) Strand = Plus / Minus Query: 168 caggtgtatggaagcacgagaagagtgatggccatgaagactatggtctccttgttagcg 227 ||||||||||||||||||| ||||||||||| |||||||||||||| || |||||||| | Sbjct: 19923996 caggtgtatggaagcacgaaaagagtgatggacatgaagactatggcctgcttgttagtg 19923937 Query: 228 agccagccaggaaatatgccatagtcaaagagcttgatagccctgttactttgaaggatg 287 || |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 19923936 agaaggccaagaaatatgccataatcaaggagcttgatgagcctgttactttgaaggatg 19923877 Query: 288 ggacagttgtcctgcagttcgaagtgaggcttcagaatggcctcgagtgtggaggtgctt 347 |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| | Sbjct: 19923876 ggactgttgtcctgcagtttgaagtgaggcttcagaatggccttgagtgtggaggtgcat 19923817 Query: 348 accttaagtacattcgccctcaggaggctggatgggatgccaaggaatttgacaatgaca 407 | |||||||||||||| |||||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 19923816 atcttaagtacattcgtcctcaggatgctgcatgggatgccaaggagtttgataatgaga 19923757 Query: 408 ctccttacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttca 467 |||||||||| |||||||||||||||||||||||||| ||||| |||||||| || |||| Sbjct: 19923756 ctccttacactattatgtttggtcctgacaaatgtggatcaactaacaaggtgcatttca 19923697 Query: 468 tcctgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccac 527 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 19923696 tccttaagcacaagaaccccaagactggcaagtatgttgaacaccacctcaagttcccac 19923637 Query: 528 cctctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggataacg 587 | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 19923636 cttctgtcccatatgataagctctctcatgtctacacggctatcttgaagcctgataatg 19923577 Query: 588 aggt 591 |||| Sbjct: 19923576 aggt 19923573 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 ttcgacgagggcttcgaggggagctggatcgtctccggcaagga 159 ||||||||| ||||||||||||| ||| | ||||||| ||||| Sbjct: 19924993 ttcgacgagagcttcgaggggaggtgggttctctccgggaagga 19924950
>emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA Length = 1559 Score = 281 bits (142), Expect = 1e-72 Identities = 217/242 (89%) Strand = Plus / Plus Query: 351 ttaagtacattcgccctcaggaggctggatgggatgccaaggaatttgacaatgacactc 410 |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||| Sbjct: 6 ttaagtacatccgccctcaggatgctggatgggatgccaaggagtttgataatgagactc 65 Query: 411 cttacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcc 470 | ||||| |||||||||||||| || |||||||| ||||||||||||||||| ||||||| Sbjct: 66 catacactattatgtttggtccagataaatgtgggtcaaccaacaaggttcatttcatcc 125 Query: 471 tgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccaccct 530 | ||||||||||| || |||||||| || |||||||| ||||||||||| | |||||| | Sbjct: 126 ttaagcacaagaatcctaagactggaaagtatgttgagcatcacctcaaattcccacctt 185 Query: 531 ctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggataacgagg 590 |||||||||| ||||||||||||||||||||||| |||||||||||||| || || |||| Sbjct: 186 ctgtcccatacgacaagctctctcatgtctacacagctatcttgaagccagacaatgagg 245 Query: 591 tc 592 || Sbjct: 246 tc 247
>gb|AY112482.1| Zea mays CL2224_1 mRNA sequence Length = 1661 Score = 281 bits (142), Expect = 1e-72 Identities = 217/242 (89%) Strand = Plus / Plus Query: 351 ttaagtacattcgccctcaggaggctggatgggatgccaaggaatttgacaatgacactc 410 |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||| Sbjct: 6 ttaagtacatccgccctcaggatgctggatgggatgccaaggagtttgataatgagactc 65 Query: 411 cttacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcc 470 | ||||| |||||||||||||| || |||||||| ||||||||||||||||| ||||||| Sbjct: 66 catacactattatgtttggtccagataaatgtgggtcaaccaacaaggttcatttcatcc 125 Query: 471 tgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccaccct 530 | ||||||||||| || |||||||| || |||||||| ||||||||||| | |||||| | Sbjct: 126 ttaagcacaagaatcctaagactggaaagtatgttgagcatcacctcaaattcccacctt 185 Query: 531 ctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggataacgagg 590 |||||||||| ||||||||||||||||||||||| |||||||||||||| || || |||| Sbjct: 186 ctgtcccatacgacaagctctctcatgtctacacagctatcttgaagccagacaatgagg 245 Query: 591 tc 592 || Sbjct: 246 tc 247
>gb|AY036607.1| Brassica napus putative papillar cell-specific calnexin mRNA, complete cds Length = 1907 Score = 119 bits (60), Expect = 1e-23 Identities = 153/184 (83%) Strand = Plus / Plus Query: 408 ctccttacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttca 467 |||||||| | || |||||||| || ||||| ||||| | || ||||| ||||| |||| Sbjct: 450 ctccttactctatcatgtttggacccgacaagtgtggagctacgaacaaagttcatttca 509 Query: 468 tcctgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccac 527 | ||||||||||||||||||||| ||| | || ||||| || |||||||||| ||| | Sbjct: 510 ttttgaagcacaagaaccccaagagcggcgagtacgttgagcaccacctcaagttccctc 569 Query: 528 cctctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggataacg 587 ||||||| || ||||||||||| || ||||||||||| || ||||||||||| || |||| Sbjct: 570 cctctgttccttatgacaagctttcccatgtctacaccgccatcttgaagccagacaacg 629 Query: 588 aggt 591 |||| Sbjct: 630 aggt 633 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||| ||||||||||| || ||||| |||||||| Sbjct: 211 aggtgtgtggaagcatgagaagagtgagggacatgatgactatgg 255
>gb|U08315.1|ATU08315 Arabidopsis thaliana Columbia calnexin homolog gene, complete cds Length = 3144 Score = 115 bits (58), Expect = 2e-22 Identities = 192/234 (82%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 332 gagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc-caa 390 |||||||| ||||||||| | ||||| |||| ||||| || |||||||||| | | ||| Sbjct: 997 gagtgtggtggtgcttacttaaagtatcttcgtcctcaagaagctggatgggttcctcaa 1056 Query: 391 ggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttcaac 450 || ||||| ||||| |||||||| | || |||||||| ||||| || |||||| | || Sbjct: 1057 ggg-tttgataatgattctccttactctatcatgtttggacctgataagtgtggtgctac 1115 Query: 451 caacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttgaaca 510 |||||||||||| |||||| ||||||| ||||| ||||||| |||| | | |||||| || Sbjct: 1116 caacaaggttcatttcatcttgaagcataagaatcccaagagtggcgagtttgttgagca 1175 Query: 511 tcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacac 564 || ||||||| ||| || ||||| || | ||||||||| |||||||||||||| Sbjct: 1176 ccatctcaagttccctccttctgttccgtttgacaagctttctcatgtctacac 1229 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 828 aggtgtgtggaagcacgagaagagtgaagggcatgatgattatgg 872
>ref|NM_120816.2| Arabidopsis thaliana calcium ion binding AT5G07340 mRNA, complete cds Length = 1877 Score = 107 bits (54), Expect = 4e-20 Identities = 191/234 (81%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 332 gagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc-caa 390 |||||||| ||||||||| | ||||| |||| ||||| || |||||||||| | | ||| Sbjct: 412 gagtgtggtggtgcttacttaaagtatcttcgtcctcaagaagctggatgggttcctcaa 471 Query: 391 ggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttcaac 450 || ||||| ||||| |||||||| | || |||||||| ||||| || |||||| | || Sbjct: 472 ggg-tttgataatgattctccttactctatcatgtttggacctgataagtgtggtgctac 530 Query: 451 caacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttgaaca 510 |||||||||||| |||||| ||||||| ||||| ||||||| |||| | | |||||| || Sbjct: 531 caacaaggttcatttcatcttgaagcataagaatcccaagagtggcgagtttgttgagca 590 Query: 511 tcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacac 564 || ||||||| ||| || ||||| || | ||||| ||| |||||||||||||| Sbjct: 591 ccatctcaagttccctccttctgttccgtttgacatgctttctcatgtctacac 644 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 243 aggtgtgtggaagcacgagaagagtgaagggcatgatgattatgg 287
>gb|BT010385.1| Arabidopsis thaliana At5g07340 mRNA, complete cds Length = 1599 Score = 107 bits (54), Expect = 4e-20 Identities = 191/234 (81%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 332 gagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc-caa 390 |||||||| ||||||||| | ||||| |||| ||||| || |||||||||| | | ||| Sbjct: 325 gagtgtggtggtgcttacttaaagtatcttcgtcctcaagaagctggatgggttcctcaa 384 Query: 391 ggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttcaac 450 || ||||| ||||| |||||||| | || |||||||| ||||| || |||||| | || Sbjct: 385 ggg-tttgataatgattctccttactctatcatgtttggacctgataagtgtggtgctac 443 Query: 451 caacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttgaaca 510 |||||||||||| |||||| ||||||| ||||| ||||||| |||| | | |||||| || Sbjct: 444 caacaaggttcatttcatcttgaagcataagaatcccaagagtggcgagtttgttgagca 503 Query: 511 tcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacac 564 || ||||||| ||| || ||||| || | ||||| ||| |||||||||||||| Sbjct: 504 ccatctcaagttccctccttctgttccgtttgacatgctttctcatgtctacac 557 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 156 aggtgtgtggaagcacgagaagagtgaagggcatgatgattatgg 200
>gb|BT001999.1| Arabidopsis thaliana calnexin homolog (At5g07340) mRNA, complete cds Length = 1879 Score = 107 bits (54), Expect = 4e-20 Identities = 191/234 (81%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 332 gagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc-caa 390 |||||||| ||||||||| | ||||| |||| ||||| || |||||||||| | | ||| Sbjct: 414 gagtgtggtggtgcttacttaaagtatcttcgtcctcaagaagctggatgggttcctcaa 473 Query: 391 ggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttcaac 450 || ||||| ||||| |||||||| | || |||||||| ||||| || |||||| | || Sbjct: 474 ggg-tttgataatgattctccttactctatcatgtttggacctgataagtgtggtgctac 532 Query: 451 caacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttgaaca 510 |||||||||||| |||||| ||||||| ||||| ||||||| |||| | | |||||| || Sbjct: 533 caacaaggttcatttcatcttgaagcataagaatcccaagagtggcgagtttgttgagca 592 Query: 511 tcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacac 564 || ||||||| ||| || ||||| || | ||||| ||| |||||||||||||| Sbjct: 593 ccatctcaagttccctccttctgttccgtttgacatgctttctcatgtctacac 646 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 245 aggtgtgtggaagcacgagaagagtgaagggcatgatgattatgg 289
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 107 bits (54), Expect = 4e-20 Identities = 191/234 (81%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 332 gagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc-caa 390 |||||||| ||||||||| | ||||| |||| ||||| || |||||||||| | | ||| Sbjct: 33112 gagtgtggtggtgcttacttaaagtatcttcgtcctcaagaagctggatgggttcctcaa 33171 Query: 391 ggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttcaac 450 || ||||| ||||| |||||||| | || |||||||| ||||| || |||||| | || Sbjct: 33172 ggg-tttgataatgattctccttactctatcatgtttggacctgataagtgtggtgctac 33230 Query: 451 caacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttgaaca 510 |||||||||||| |||||| ||||||| ||||| ||||||| |||| | | |||||| || Sbjct: 33231 caacaaggttcatttcatcttgaagcataagaatcccaagagtggcgagtttgttgagca 33290 Query: 511 tcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacac 564 || ||||||| ||| || ||||| || | ||||| ||| |||||||||||||| Sbjct: 33291 ccatctcaagttccctccttctgttccgtttgacatgctttctcatgtctacac 33344 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 169 aggtgtatggaagcacgagaagagtgatggccatgaagactatgg 213 |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 32943 aggtgtgtggaagcacgagaagagtgaagggcatgatgattatgg 32987
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence Length = 84869 Score = 105 bits (53), Expect = 2e-19 Identities = 202/249 (81%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 329 ctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggctggatgggatgc- 387 ||||||||||| |||||||| | || ||| |||| ||||| || |||||||||| | | Sbjct: 2068 ctcgagtgtggtggtgcttatttaaaataccttcgtcctcaagaagctggatgggttcct 2127 Query: 388 caaggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtggttc 447 ||||| ||||| ||||| |||||||| | || |||||||| |||||||| |||||| | Sbjct: 2128 caaggg-tttgataatgattctccttactctatcatgtttgggcctgacaagtgtggtgc 2186 Query: 448 aaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggcaaatatgttga 507 ||||||||||| || ||||| | ||||| ||||| ||||||| |||| | | |||||| Sbjct: 2187 taccaacaaggtgcatttcatttttaagcataagaatcccaagagtggcgagtttgttga 2246 Query: 508 acatcacctcaagtccccaccctctgtcccatatgacaagctctctcatgtctacacggc 567 || || ||||||| ||| || ||||| || | ||| ||||| |||||||||||||| || Sbjct: 2247 gcaccatctcaagttccctccttctgttccgtttgagaagctttctcatgtctacactgc 2306 Query: 568 tatcttgaa 576 ||||||||| Sbjct: 2307 tatcttgaa 2315 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 176 tggaagcacgagaagagtgatggccatgaagactatggtctccttgttagcgag 229 |||||||| ||||||||||| || ||||| || ||||| || ||||| |||||| Sbjct: 1915 tggaagcatgagaagagtgaagggcatgatgattatggacttcttgtgagcgag 1968
>ref|NM_125573.2| Arabidopsis thaliana calcium ion binding AT5G61790 mRNA, complete cds Length = 1998 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 522 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 581 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 582 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 641 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 642 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 691
>emb|Z18242.1|ATCALHOM Arabidopsis thaliana calnexin homolog Length = 1858 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 495 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 554 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 555 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 614 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 615 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 664
>gb|AY114669.1| Arabidopsis thaliana calnexin-like protein precursor (At5g61790) mRNA, complete cds Length = 1671 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 409 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 468 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 469 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 528 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 529 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 578
>gb|AY065007.1| Arabidopsis thaliana AT5g61790/mac9_90 mRNA sequence Length = 1910 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 520 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 579 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 580 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 639 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 640 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 689
>gb|AY059880.1| Arabidopsis thaliana calnexin homolog precursor (MAC9.11) mRNA, complete cds Length = 1919 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 520 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 579 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 580 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 639 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 640 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 689
>gb|AY086864.1| Arabidopsis thaliana clone 2869 mRNA, complete sequence Length = 1897 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 522 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 581 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 582 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 641 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 642 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 691
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9 Length = 57246 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Minus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| ||||| || ||||| || || |||||| ||||||||||| Sbjct: 34270 atgtttgggcctgacaagtgtggaggtacgaacaaagtgcatttcatcttgaagcacaag 34211 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||| |||| | || |||||||| || || |||| ||| |||||||| || ||| Sbjct: 34210 aatcccaagagtggcgagtacgttgaacaccatctgaagttccctccctctgttccttat 34151 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataacgaggt 591 |||||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 34150 gacaagctttcccatgtctacaccgccatcttgaaacccgacaacgaggt 34101
>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence Length = 106571 Score = 95.6 bits (48), Expect = 2e-16 Identities = 207/260 (79%) Strand = Plus / Minus Query: 317 cttcagaatggcctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggct 376 ||||||||||||||||| ||||| ||||| || || || || |||| || ||||| ||| Sbjct: 100725 cttcagaatggcctcgaatgtggtggtgcatatctaaaatatcttcgaccacaggaagct 100666 Query: 377 ggatgggatgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgac 436 || ||| | |||||||||||||||| || |||| || | || ||||||||||||||| Sbjct: 100665 ggttggaaacccaaggaatttgacaacgattctccctattctatcatgtttggtcctgac 100606 Query: 437 aaatgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggc 496 || ||||| | || |||||||| |||||||| | ||||| ||||| || |||| ||| Sbjct: 100605 aagtgtggggccacaaacaaggtgcacttcattttcaagcataagaatccgaagagtggg 100546 Query: 497 aaatatgttgaacatcacctcaagtccccaccctctgtcccatatgacaagctctctcat 556 | ||||||||||| || ||||||| || || ||||| || | ||||||||| ||||| Sbjct: 100545 gagtatgttgaacaccatctcaagtttcccccatctgttccttctgacaagctatctcac 100486 Query: 557 gtctacacggctatcttgaa 576 || ||||| ||||| ||||| Sbjct: 100485 gtgtacactgctattttgaa 100466
>gb|AY050777.1| Arabidopsis thaliana At5g61790 mRNA sequence Length = 1908 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 464 ttcatcctgaagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtcc 523 |||||| ||||||||||||| ||||||| |||| | || |||||||| || || |||| | Sbjct: 559 ttcatcttgaagcacaagaatcccaagagtggcgagtacgttgaacaccatctgaagttc 618 Query: 524 ccaccctctgtcccatatgacaagctctctcatgtctacacggctatcttgaagccggat 583 || |||||||| || ||||||||||| || ||||||||||| || |||||||| || || Sbjct: 619 cctccctctgttccttatgacaagctttcccatgtctacaccgccatcttgaaacccgac 678 Query: 584 aacgaggt 591 |||||||| Sbjct: 679 aacgaggt 686
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence Length = 117358 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 ||||||||||| ||||| ||||| |||| || ||||||||||||||| | | ||| ||| Sbjct: 90136 atgtttggtccagacaagtgtggggcaacaaataaggttcacttcatcttcaggcataag 90195 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || || ||||| || || ||||||||||| || ||||||| ||| || |||||||||| | Sbjct: 90196 aatccaaagaccggaaagtatgttgaacaccatctcaagttccccccttctgtcccatct 90255 Query: 542 gacaagctctctcatgtctacac 564 ||||| || |||||||| ||||| Sbjct: 90256 gacaaactatctcatgtgtacac 90278
>dbj|AB196933.1| Glycine max Gm cnx-1 mRNA for calnexin, complete cds Length = 1786 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Plus Query: 317 cttcagaatggcctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggct 376 ||||||||||||||||| ||||| ||||| || |||| || |||| || |||||| Sbjct: 424 cttcagaatggcctcgaatgtggtggtgcatatattaaatatcttcgaccccaggagagc 483 Query: 377 ggatgggatgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgac 436 |||||| | | |||||||||||||| || |||| || | || |||||||||||||| Sbjct: 484 ggatggaaaccaaaggaatttgacaacgaatctccatattctatcatgtttggtcctgat 543 Query: 437 aaatgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggc 496 || |||||| | || ||||||||||||||||| | ||||| |||||||| |||| ||| Sbjct: 544 aagtgtggtgctacaaacaaggttcacttcattttcaagcataagaacccaaagagtggg 603 Query: 497 aaatatgttgaacatcacctcaagtccccaccctctgtcccatatgacaagctctctcat 556 | |||||||| ||||| ||||||| || || |||||||||| ||||| || ||||| Sbjct: 604 gagtatgttgagcatcatctcaagtatcccccttctgtcccatcggacaaactaactcat 663 Query: 557 gtctacacggctatcttgaagccggataa 585 || ||||| || || ||||||| ||||| Sbjct: 664 gtgtacactgcaattctgaagcctgataa 692 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 170 ggtgtatggaagcacgagaagagtgatggccatgaagactatggtctccttgttagcgag 229 ||||| |||||||| | ||||||||||| ||||| || ||||| || |||||||| || Sbjct: 277 ggtgtctggaagcatgccaagagtgatgggcatgatgattatggacttcttgttagtgaa 336 Query: 230 ccagccaggaaatatgccatagtcaaagagcttg 263 | ||||||||||||||| ||||||||||| |||| Sbjct: 337 caagccaggaaatatgctatagtcaaagaacttg 370
>gb|U20502.1|GMU20502 Glycine max calnexin mRNA, complete cds Length = 1919 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Plus Query: 317 cttcagaatggcctcgagtgtggaggtgcttaccttaagtacattcgccctcaggaggct 376 ||||||||||||||||| ||||| ||||| || |||| || |||| || |||||| Sbjct: 364 cttcagaatggcctcgaatgtggtggtgcatatattaaatatcttcgaccccaggagagc 423 Query: 377 ggatgggatgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgac 436 |||||| | | |||||||||||||| || |||| || | || |||||||||||||| Sbjct: 424 ggatggaaaccaaaggaatttgacaacgaatctccatattctatcatgtttggtcctgat 483 Query: 437 aaatgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagactggc 496 || |||||| | || ||||||||||||||||| | ||||| |||||||| |||| ||| Sbjct: 484 aagtgtggtgctacaaacaaggttcacttcattttcaagcataagaacccaaagagtggg 543 Query: 497 aaatatgttgaacatcacctcaagtccccaccctctgtcccatatgacaagctctctcat 556 | |||||||| ||||| ||||||| || || |||||||||| ||||| || ||||| Sbjct: 544 gagtatgttgagcatcatctcaagtatcccccttctgtcccatcggacaaactaactcat 603 Query: 557 gtctacacggctatcttgaagccggataa 585 || ||||| || || ||||||| ||||| Sbjct: 604 gtgtacactgcaattctgaagcctgataa 632 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 170 ggtgtatggaagcacgagaagagtgatggccatgaagactatggtctccttgttagcgag 229 ||||| |||||||| | ||||||||||| ||||| || ||||| || |||||||| || Sbjct: 217 ggtgtctggaagcatgccaagagtgatgggcatgatgattatggacttcttgttagtgaa 276 Query: 230 ccagccaggaaatatgccatagtcaaagagcttg 263 | ||||||||||||||| ||||||||||| |||| Sbjct: 277 caagccaggaaatatgctatagtcaaagaacttg 310
>gb|BT013681.1| Lycopersicon esculentum clone 132503F, mRNA sequence Length = 1836 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 413 tacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctg 472 |||||||| |||||||| ||||| ||||| || | || |||||||| |||||||| || Sbjct: 412 tacacaataatgtttggacctgataaatgcggagccacaaacaaggtgcacttcattttg 471 Query: 473 aagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctct 532 || ||||||||||| |||| ||| |||| ||||| || |||||||||| || |||||| Sbjct: 472 aaacacaagaaccctaagagtggagaatacgttgagcaccacctcaagtttcctccctct 531 Query: 533 gtcccatatgacaagctctctcatgtctacacggctatcttgaagccgga 582 || ||| ||||||||| ||||||| ||||| ||| | ||||| ||||| Sbjct: 532 gtaccagctgacaagctaactcatgtttacactgctgtgttgaaaccgga 581
>dbj|AB218598.1| Lycopersicon esculentum LeCNX61.0 mRNA for calnexin-like protein, complete cds Length = 1964 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 413 tacacaattatgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctg 472 |||||||| |||||||| ||||| ||||| || | || |||||||| |||||||| || Sbjct: 522 tacacaataatgtttggacctgataaatgcggagccacaaacaaggtgcacttcattttg 581 Query: 473 aagcacaagaaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctct 532 || ||||||||||| |||| ||| |||| ||||| || |||||||||| || |||||| Sbjct: 582 aaacacaagaaccctaagagtggagaatacgttgagcaccacctcaagtttcctccctct 641 Query: 533 gtcccatatgacaagctctctcatgtctacacggctatcttgaagccgga 582 || ||| ||||||||| ||||||| ||||| ||| | ||||| ||||| Sbjct: 642 gtaccagctgacaagctaactcatgtttacactgctgtgttgaaaccgga 691
>emb|Y17329.1|PSA17329 Pisum sativum mRNA for calnexin Length = 1951 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 ||||||||||| || | ||||| ||||||||||||| || || ||| | | ||| ||| Sbjct: 472 atgtttggtccagataggtgtggggcaaccaacaaggtgcattttatcttcaggcataag 531 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || ||||||||||| || |||||||||| |||||||||| || || |||||||| | | Sbjct: 532 aatcccaagactgggaagcatgttgaacaccacctcaagtttcctccttctgtcccgtct 591 Query: 542 gacaagctctctcatgtctacac 564 ||||| || |||||||| ||||| Sbjct: 592 gacaaactatctcatgtgtacac 614 Score = 52.0 bits (26), Expect = 0.002 Identities = 101/126 (80%) Strand = Plus / Plus Query: 140 tggatcgtctccggcaaggaagagtactcaggtgtatggaagcacgagaagagtgatggc 199 |||||||| || |||||||| || ||| |||||||||||||| |||||||| || Sbjct: 190 tggatcgtatctggcaaggaggaatacaatggtgtatggaagcattcaaagagtgaaggg 249 Query: 200 catgaagactatggtctccttgttagcgagccagccaggaaatatgccatagtcaaagag 259 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||| |||||| Sbjct: 250 catgatgattttggacttcttgtcagtgaaccagcaaggaagtatgctatagttaaagag 309 Query: 260 cttgat 265 |||||| Sbjct: 310 cttgat 315
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatc 469 ||||| ||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 161618 atgttcggtcccgacaagtgtggttccaccaacaaggttcacttcatc 161665
>ref|XM_570776.1| Cryptococcus neoformans var. neoformans JEC21 ER-associated protein catabolism-related protein (CNE00610) partial mRNA Length = 1871 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatc 469 ||||| ||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 550 atgttcggtcccgacaagtgtggttccaccaacaaggttcacttcatc 597
>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a, complete sequence Length = 65557 Score = 63.9 bits (32), Expect = 6e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||||||||| || ||||| | || ||||| || || ||||| | | ||| ||| Sbjct: 12907 atgtttggtcctgataagtgtggggctacaaacaaagtgcatttcattttcaggcataag 12966 Query: 482 aaccccaagactggcaaatatgttgaacatcacctcaagtccccaccctctgtcccatat 541 || || |||||||| || ||||||||||| || ||||||| ||| || |||||||||| Sbjct: 12967 aatccaaagactggaaagtatgttgaacaccatctcaagttccccccttctgtcccattg 13026 Query: 542 gacaagctctctcatgtctacacggctatcttgaagccggataa 585 ||||| || ||||| || ||||| ||||| ||||||| ||||| Sbjct: 13027 gacaaactatctcacgtgtacactgctattctgaagcctgataa 13070
>ref|XM_500829.1| Yarrowia lipolytica CLIB122, YALI0B13156g predicted mRNA Length = 1749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcat 468 |||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 487 atgtttggccctgacaaatgtggatccaccaacaaggtccacttcat 533
>emb|AJ277589.1|YLI277589 Yarrowia lipolytica cnx gene for calnexin Length = 1902 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcat 468 |||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 505 atgtttggccctgacaaatgtggatccaccaacaaggtccacttcat 551
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcat 468 |||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 1771284 atgtttggccctgacaaatgtggatccaccaacaaggtccacttcat 1771238
>ref|XM_656104.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3592.2), mRNA Length = 1698 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 ||||||||||| ||||| || ||| | || |||||||||||||||||| | |||||| Sbjct: 514 atgtttggtcccgacaagtgcggtgccactaacaaggttcacttcatcttccgccacaag 573 Query: 482 aaccccaagactgg 495 |||||||||||||| Sbjct: 574 aaccccaagactgg 587
>emb|Z35108.1|HTCALNEX H.tuberosus mRNA for calnexin Length = 1850 Score = 60.0 bits (30), Expect = 9e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 385 tgccaaggaatttgacaatgacactccttacacaattatgtttggtcctgacaaatgtgg 444 |||||||| |||||||| || |||||||| | || ||||| || || |||||||| || Sbjct: 452 tgccaagggctttgacaacgagtctccttactcgatcatgttcggccccgacaaatgcgg 511 Query: 445 ttcaaccaacaaggttcacttcatcctgaagcacaagaaccc 486 | |||| ||||||||||| |||||| | |||||||| ||||| Sbjct: 512 tgcaacaaacaaggttcatttcatcttaaagcacaaaaaccc 553
>ref|XM_959607.1| Neurospora crassa OR74A hypothetical protein (NCU09265.1) partial mRNA Length = 1716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 449 accaacaaggttcacttcatcctgaagcacaagaaccccaagac 492 ||||||||||| ||||||||| | || ||||||||||||||||| Sbjct: 547 accaacaaggtgcacttcatcttcaaccacaagaaccccaagac 590
>ref|XM_331656.1| Neurospora crassa OR74A hypothetical protein (NCU09265.1) partial mRNA Length = 1716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 449 accaacaaggttcacttcatcctgaagcacaagaaccccaagac 492 ||||||||||| ||||||||| | || ||||||||||||||||| Sbjct: 547 accaacaaggtgcacttcatcttcaaccacaagaaccccaagac 590
>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4 Length = 61971 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 449 accaacaaggttcacttcatcctgaagcacaagaaccccaagac 492 ||||||||||| ||||||||| | || ||||||||||||||||| Sbjct: 48121 accaacaaggtgcacttcatcttcaaccacaagaaccccaagac 48164
>ref|XM_363681.1| Magnaporthe grisea 70-15 hypothetical protein (MG01607.4) partial mRNA Length = 1734 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 449 accaacaaggttcacttcatcctgaagcacaagaaccccaagac 492 ||||||||||||||||| ||| | || ||||||||||| ||||| Sbjct: 580 accaacaaggttcactttatcttcaaccacaagaaccctaagac 623
>ref|XM_380667.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00491.1) partial mRNA Length = 1689 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 449 accaacaaggttcacttcatcctgaagcacaagaaccccaagac 492 |||||||||||||||||||| | || || |||||||||||||| Sbjct: 523 accaacaaggttcacttcattttcaaccataagaaccccaagac 566 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 320 cagaatggcctcgagtgtggaggtgcttac 349 ||||||||||||||||| || ||||||||| Sbjct: 397 cagaatggcctcgagtgcggtggtgcttac 426
>gb|AY675086.1| Botryosphaeria parva microsatellite BotF19 sequence Length = 241 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 37 gctcttgctgccgctgctgctgg 59 ||||||||||||||||||||||| Sbjct: 92 gctcttgctgccgctgctgctgg 114
>gb|DQ497013.1| Coccidioides posadasii strain Silveira calnexin mRNA, complete cds Length = 2104 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 |||||||| |||||||| || || | || ||||||||||| || ||| | ||||||||| Sbjct: 654 atgtttggacctgacaagtgcggagccactaacaaggttcattttatcttcaagcacaag 713 Query: 482 aaccccaagac 492 ||||| ||||| Sbjct: 714 aacccaaagac 724
>gb|AY560606.1| Aspergillus fumigatus calnexin mRNA, complete cds Length = 2029 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcat 468 ||||| ||||| ||||| || ||| | |||||||||||||||||||| Sbjct: 505 atgttcggtcccgacaagtgcggtgctaccaacaaggttcacttcat 551
>ref|XM_746454.1| Aspergillus fumigatus Af293 calnexin (Afu4g12850) partial mRNA Length = 1692 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcat 468 ||||| ||||| ||||| || ||| | |||||||||||||||||||| Sbjct: 505 atgttcggtcccgacaagtgcggtgctaccaacaaggttcacttcat 551
>ref|XM_059689.5| PREDICTED: Homo sapiens similar to CG4502-PA (FLJ25076), mRNA Length = 4406 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 cttgctgccgctgctgctggtgg 62 ||||||||||||||||||||||| Sbjct: 99 cttgctgccgctgctgctggtgg 77
>emb|AL115492.1|CNS01CGC Botrytis cinerea strain T4 cDNA library Length = 696 Score = 46.1 bits (23), Expect = 0.13 Identities = 52/62 (83%) Strand = Plus / Plus Query: 434 gacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagact 493 ||||| |||||| | ||||||||||||||| | ||| | || ||||||||||| ||||| Sbjct: 320 gacaagtgtggtaccaccaacaaggttcaccttatcattaaccacaagaacccanagact 379 Query: 494 gg 495 || Sbjct: 380 gg 381
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 cttgctgccgctgctgctggtgg 62 ||||||||||||||||||||||| Sbjct: 118697 cttgctgccgctgctgctggtgg 118675
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 32 gcggtgctcttgctgccgctgctgctg 58 ||||||||| ||||||||||||||||| Sbjct: 4174930 gcggtgctcgtgctgccgctgctgctg 4174904
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 32 gcggtgctcttgctgccgctgctgctg 58 ||||||||| ||||||||||||||||| Sbjct: 84944 gcggtgctcgtgctgccgctgctgctg 84918
>dbj|AK070086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040E15, full insert sequence Length = 2100 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 32 gcggtgctcttgctgccgctgctgctg 58 ||||||||| ||||||||||||||||| Sbjct: 281 gcggtgctcgtgctgccgctgctgctg 307
>dbj|AK063386.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G09, full insert sequence Length = 2760 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 32 gcggtgctcttgctgccgctgctgctg 58 ||||||||| ||||||||||||||||| Sbjct: 92 gcggtgctcgtgctgccgctgctgctg 118
>gb|AY850367.1| Penicillium chrysogenum calreticulin mRNA, complete cds Length = 1674 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 422 atgtttggtcctgacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaag 481 ||||| || |||||||| || ||| | || |||||||||||||||||| | |||||| Sbjct: 490 atgttcggccctgacaagtgcggtgccactaacaaggttcacttcatcttctgccacaag 549 Query: 482 aaccccaagac 492 ||||||||||| Sbjct: 550 aaccccaagac 560
>dbj|D78590.1| Rana rugosa mRNA for calnexin, complete cds Length = 2142 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 410 ccttacacaattatgtttggtcctgacaaatgtgg 444 |||||| |||| ||||||||||||||||| ||||| Sbjct: 635 ccttactcaatcatgtttggtcctgacaagtgtgg 669
>ref|NM_001030620.1| Gallus gallus calnexin (CANX), mRNA Length = 3173 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 407 actccttacacaattatgtttggtcctgacaaatgtgg 444 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 627 actccatacacgatcatgtttggccctgacaaatgtgg 664
>gb|AC158966.5| Mus musculus chromosome 1, clone RP23-382I8, complete sequence Length = 183519 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 429 gtcctgacaaatgtggttcaac 450 |||||||||||||||||||||| Sbjct: 149857 gtcctgacaaatgtggttcaac 149836
>emb|AJ719429.1| Gallus gallus mRNA for hypothetical protein, clone 2d15 Length = 3173 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 407 actccttacacaattatgtttggtcctgacaaatgtgg 444 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 627 actccatacacgatcatgtttggccctgacaaatgtgg 664
>gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171451 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 159159 tgctgccgctgctgctggtggc 159180
>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176521 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 13277 tgctgccgctgctgctggtggc 13298
>ref|NM_139508.2| Drosophila melanogaster CG32486-RD (CG32486), mRNA Length = 2360 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 562 tgctgccgctgctgctggtggc 541
>ref|NM_137992.1| Drosophila melanogaster CG5549-RA (CG5549), mRNA Length = 3606 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 34 ggtgctcttgctgccgctgctgctggtggc 63 |||||| |||||||| |||||||||||||| Sbjct: 2554 ggtgctgttgctgccactgctgctggtggc 2583
>gb|AY052026.1| Drosophila melanogaster LD47625 full length cDNA Length = 2347 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 535 tgctgccgctgctgctggtggc 514
>emb|AL116195.1|CNS01CZV Botrytis cinerea strain T4 cDNA library Length = 720 Score = 44.1 bits (22), Expect = 0.52 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 434 gacaaatgtggttcaaccaacaaggttcacttcatcctgaagcacaagaaccccaagact 493 ||||| |||||| | ||||||||||||||| | ||| | || |||||||| ||||||||| Sbjct: 394 gacaagtgtggtaccaccaacaaggttcaccttatcattaaccacaagaa-cccaagact 452 Query: 494 gg 495 || Sbjct: 453 gg 454
>gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, region 60A2-60A3, BAC clone BACR05F24, complete sequence Length = 147086 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 34 ggtgctcttgctgccgctgctgctggtggc 63 |||||| |||||||| |||||||||||||| Sbjct: 60992 ggtgctgttgctgccactgctgctggtggc 61021
>ref|XM_624904.1| PREDICTED: Apis mellifera similar to AT22968p (LOC552528), mRNA Length = 3064 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 407 actccttacacaattatgtttggtcctgacaaatgtgg 444 |||||||| || || |||||||||||||| |||||||| Sbjct: 952 actccttatactataatgtttggtcctgataaatgtgg 989
>gb|AC101696.14| Mus musculus chromosome 1, clone RP23-238M18, complete sequence Length = 162270 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 429 gtcctgacaaatgtggttcaac 450 |||||||||||||||||||||| Sbjct: 79225 gtcctgacaaatgtggttcaac 79204
>gb|AY137200.1| Synthetic construct fiber protein DP1B mRNA, partial cds Length = 303 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 84 tgctgccgctgctgctggtggc 105
>dbj|AK108973.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E03, full insert sequence Length = 2057 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 409 tgctgccgctgctgctggtggc 388
>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete sequence Length = 304419 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggc 63 |||||||||||||||||||||| Sbjct: 303758 tgctgccgctgctgctggtggc 303779
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 34 ggtgctcttgctgccgctgctgctggtggc 63 |||||| |||||||| |||||||||||||| Sbjct: 357477 ggtgctgttgctgccactgctgctggtggc 357506
>gb|AY701834.1| Rattus fuscipes greyii clone RfgCTG1H microsatellite sequence Length = 212 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcctc 66 |||||| |||||||||||||||||| Sbjct: 73 tgctgctgctgctgctggtggcctc 49
>ref|XM_362100.1| Magnaporthe grisea 70-15 hypothetical protein (MG04545.4) partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 33 cggtgctcttgctgccgctgctgctggtg 61 |||||| ||||| |||||||||||||||| Sbjct: 180 cggtgcccttgccgccgctgctgctggtg 208
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggcctc 66 |||||||||||||||| |||||||| Sbjct: 13948360 tgctgccgctgctgctcgtggcctc 13948384
>gb|AY210840.1| Priapulus caudatus 5.8S ribosomal RNA and 28S ribosomal RNA genes, partial sequence Length = 4271 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 ggtgctcttgctgccgctgctgctg 58 |||||| |||||||||||||||||| Sbjct: 518 ggtgctgttgctgccgctgctgctg 542
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcctc 66 |||||||||||||||| |||||||| Sbjct: 63122 tgctgccgctgctgctcgtggcctc 63098
>gb|BC041719.1| Xenopus laevis similar to calnexin, mRNA (cDNA clone MGC:52646 IMAGE:4681451), complete cds Length = 2813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 gcacaagaaccccaagactgg 495 ||||||||||||||||||||| Sbjct: 753 gcacaagaaccccaagactgg 773
>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence Length = 172626 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 agccagccaggaaatatgcca 248 ||||||||||||||||||||| Sbjct: 107495 agccagccaggaaatatgcca 107515
>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 155615 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ttgctgccgctgctgctggtg 61 ||||||||||||||||||||| Sbjct: 45301 ttgctgccgctgctgctggtg 45281
>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157739 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ttgctgccgctgctgctggtg 61 ||||||||||||||||||||| Sbjct: 30843 ttgctgccgctgctgctggtg 30823
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 cacaagaaccccaagactggc 496 ||||||||||||||||||||| Sbjct: 834480 cacaagaaccccaagactggc 834500
>dbj|AB179042.1| Macaca fascicularis testis cDNA clone: QtsA-12004, similar to human nucleoporin 62kDa (NUP62), transcript variant 1, mRNA, RefSeq: NM_153719.2 Length = 2110 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcctcggcg 70 |||||| |||||||||||||||| ||||| Sbjct: 857 tgctgctgctgctgctggtggccgcggcg 829
>dbj|AB169731.1| Macaca fascicularis brain cDNA, clone: QflA-12431, similar to human nucleoporin 62kDa (NUP62), transcript variant 3, mRNA, RefSeq: NM_153718.2 Length = 2493 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcctcggcg 70 |||||| |||||||||||||||| ||||| Sbjct: 1117 tgctgctgctgctgctggtggccgcggcg 1089
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtggcctc 66 |||||||||||||||| |||||||| Sbjct: 13943335 tgctgccgctgctgctcgtggcctc 13943359
>gb|AY898716.1| Mus musculus castaneus strain CTP isolate 2 involucrin gene, exon 2 and partial cds Length = 1284 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ctcttgctgccgctgctgctg 58 ||||||||||||||||||||| Sbjct: 201 ctcttgctgccgctgctgctg 181
>dbj|AK119844.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-D02, full insert sequence Length = 3048 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcctc 66 |||||| |||||||||||||||||| Sbjct: 1255 tgctgctgctgctgctggtggcctc 1231
>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete sequence Length = 175890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ttgctgccgctgctgctggtg 61 ||||||||||||||||||||| Sbjct: 31609 ttgctgccgctgctgctggtg 31589
>emb|AL713913.10| Mouse DNA sequence from clone RP23-125F10 on chromosome 2, complete sequence Length = 190485 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 536 ccatatgacaagctctctcat 556 ||||||||||||||||||||| Sbjct: 104180 ccatatgacaagctctctcat 104200
>gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, complete sequence Length = 181961 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 gtgctcttgctgccgctgctgctgg 59 ||||||||||||| ||||||||||| Sbjct: 59952 gtgctcttgctgctgctgctgctgg 59928
>gb|L08641.1|SCMSMIRV Schistosoma mansoni SmIrV1 protein mRNA, complete cds Length = 2189 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 416 acaattatgtttggtcctgacaaatgtgg 444 ||||||||||| || |||||||||||||| Sbjct: 540 acaattatgttcggccctgacaaatgtgg 568
>gb|AF542529.2| Cryptococcus neoformans var. grubii strain H99 mating type alpha locus, complete sequence Length = 124734 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 agagcttgatagccctgtta 275 |||||||||||||||||||| Sbjct: 42304 agagcttgatagccctgtta 42323
>gb|BT018771.1| Zea mays clone EL01N0525E08.d mRNA sequence Length = 2227 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 326 tgctgccgctgctgctggtg 307
>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence Length = 181695 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 gtgctcttgctgccgctgctgctggtgg 62 ||||| ||||||| |||||||||||||| Sbjct: 139998 gtgctgttgctgctgctgctgctggtgg 140025
>ref|XM_716398.1| Candida albicans SC5314 hypothetical protein (CaO19_2993), mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 104 gctgccgctgctgctggtgg 85
>ref|XM_716397.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_2992), mRNA Length = 321 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 196 gctgccgctgctgctggtgg 215
>ref|XM_716126.1| Candida albicans SC5314 hypothetical protein (CaO19_10510), mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 104 gctgccgctgctgctggtgg 85
>ref|XM_716125.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_10509), mRNA Length = 321 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 196 gctgccgctgctgctggtgg 215
>gb|AC134406.14| Mus musculus chromosome 9, clone RP24-349J23, complete sequence Length = 192663 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gtcctgacaaatgtggttcaacca 452 |||||||||||||| ||||||||| Sbjct: 60210 gtcctgacaaatgtagttcaacca 60187
>gb|AY810791.1| Schistosoma japonicum SJCHGC06234 protein mRNA, partial cds Length = 846 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 tacacaattatgtttggtcctgacaaatgtgg 444 |||||||||||||| ||||| ||||| ||||| Sbjct: 529 tacacaattatgttcggtcccgacaagtgtgg 560
>gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's Hospital Oakland Research Institute) complete sequence Length = 173190 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 169683 tgctgccgctgctgctggtg 169664
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 50 tgctgccgctgctgctggtg 69
>ref|XM_758378.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0451) partial mRNA Length = 3345 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 acaagaaccccaagactggcaaat 500 |||||||||||||||||| ||||| Sbjct: 2873 acaagaaccccaagactgtcaaat 2896
>gb|AC123883.10| Mus musculus chromosome 3, clone RP23-461P7, complete sequence Length = 199554 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 7020 tgctgccgctgctgctggtg 7039
>ref|XM_536562.2| PREDICTED: Canis familiaris similar to platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa (LOC479425), mRNA Length = 2177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 947 tgctgccgctgctgctggtg 966
>emb|CR690971.2|CNS0FW3R Tetraodon nigroviridis full-length cDNA Length = 791 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 ctgccgctgctgctggtggcctcg 67 |||| ||||||||||||||||||| Sbjct: 82 ctgctgctgctgctggtggcctcg 105
>emb|AL713851.8| Human DNA sequence from clone RP11-526P5 on chromosome 10 Contains two novel genes and three CpG islands, complete sequence Length = 158779 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 aaatgtggttcaaccaacaa 456 |||||||||||||||||||| Sbjct: 28245 aaatgtggttcaaccaacaa 28264
>emb|AL158154.28| Human DNA sequence from clone RP11-383M4 on chromosome 9 Contains two novel genes and three putative novel pseudogenes, complete sequence Length = 189319 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gccagccaggaaatatgcca 248 |||||||||||||||||||| Sbjct: 16003 gccagccaggaaatatgcca 15984
>emb|BX062907.1|CNS09KPB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44BF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 939 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 344 tcttgctgccgctgctgctg 363
>emb|BX062906.1|CNS09KPA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44BF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 842 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 784 tcttgctgccgctgctgctg 765
>emb|BX043455.1|CNS095OZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 320 tcttgctgccgctgctgctg 339
>emb|BX043454.1|CNS095OY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC16AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 785 tcttgctgccgctgctgctg 766
>emb|BX008116.1|CNS08EFC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 335 tcttgctgccgctgctgctg 354
>emb|BX008115.1|CNS08EFB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 981 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 653 tcttgctgccgctgctgctg 634
>emb|BX007425.1|CNS08DW5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12BF03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 978 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 337 tcttgctgccgctgctgctg 356
>emb|AL033497.1|CAC49C10 C.albicans cosmid Ca49C10 Length = 37825 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 3547 gctgccgctgctgctggtgg 3528
>gb|AC102586.14| Mus musculus chromosome 3, clone RP23-327I19, complete sequence Length = 194959 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 9015 tgctgccgctgctgctggtg 8996
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 tgctgccgctgctgctggtggcct 65 |||||||||||||||||| ||||| Sbjct: 890832 tgctgccgctgctgctgggggcct 890809 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ctgccgctgctgctggtggc 63 |||||||||||||||||||| Sbjct: 168146 ctgccgctgctgctggtggc 168127
>gb|AC024908.22| Homo sapiens 10 BAC RP11-446F3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158349 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aaatgtggttcaaccaacaa 456 |||||||||||||||||||| Sbjct: 32067 aaatgtggttcaaccaacaa 32048
>gb|AF350270.1|AF350270 Dolomedes tenebrosus fibroin 2 mRNA, partial cds Length = 2078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 801 gctgccgctgctgctggtgg 820
>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence Length = 237678 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gtcctgacaaatgtggttcaacca 452 |||||||||||||| ||||||||| Sbjct: 17935 gtcctgacaaatgtagttcaacca 17958
>gb|AF317659.1|AF317659 Candida albicans 60S acidic ribosomal protein type P1-A (p1A) gene, complete cds Length = 398 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 203 gctgccgctgctgctggtgg 222
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tgacgggagggcgcgcggtg 37 |||||||||||||||||||| Sbjct: 1842453 tgacgggagggcgcgcggtg 1842434
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 421 tgctgccgctgctgctggtg 440
>ref|XM_315562.2| Anopheles gambiae str. PEST ENSANGP00000017773 (ENSANGG00000015284), partial mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcttgctgccgctgctgctg 58 |||||||||||||||||||| Sbjct: 1087 tcttgctgccgctgctgctg 1068
>gb|AF030342.1|AF030342 Schistosoma japonicum calcium-binding protein Sj66 mRNA, complete cds Length = 2159 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 tacacaattatgtttggtcctgacaaatgtgg 444 |||||||||||||| ||||| ||||| ||||| Sbjct: 522 tacacaattatgttcggtcccgacaagtgtgg 553
>gb|AF025955.1|AF025955 Schistosoma japonicum calcium-binding protein Sj66 precursor, mRNA, complete cds Length = 2156 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 tacacaattatgtttggtcctgacaaatgtgg 444 |||||||||||||| ||||| ||||| ||||| Sbjct: 523 tacacaattatgttcggtcccgacaagtgtgg 554
>gb|L24121.1|HUMIA2A Homo sapiens integrin alpha 2 subunit (ITGA2) DNA, 5' UTR and promoter region Length = 1170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gctgccgctgctgctggtgg 62 |||||||||||||||||||| Sbjct: 1121 gctgccgctgctgctggtgg 1140
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 tccttacacaattatgtttggtcc 432 |||| ||||||||||||||||||| Sbjct: 144795 tcctaacacaattatgtttggtcc 144772
>emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chromosome 2, complete sequence Length = 228870 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tcttgctgccgctgctgctggtgg 62 ||||||||| |||||||||||||| Sbjct: 181273 tcttgctgctgctgctgctggtgg 181296
>emb|AJ239062.1|TCR239062 Trypanosoma cruzi muc1 pseudogene Length = 1473 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgctgccgctgctgctggtg 61 |||||||||||||||||||| Sbjct: 1408 tgctgccgctgctgctggtg 1427 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,897,019 Number of Sequences: 3902068 Number of extensions: 4897019 Number of successful extensions: 106060 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105417 Number of HSP's gapped (non-prelim): 636 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)