ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10c19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full... 743 0.0
2ref|XM_464784.1| Oryza sativa (japonica cultivar-group), mRNA 289 6e-75
3gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- a... 266 8e-68
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
5dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
6dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
7ref|NM_191846.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AK100192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
11gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, compl... 46 0.15
12gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, comp... 46 0.15
13gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, comple... 46 0.15
14gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5,... 46 0.15
15gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 42 2.3
16gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly... 42 2.3
17ref|XM_451567.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B00825g ... 42 2.3
18gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete s... 42 2.3
19emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.3
20gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, com... 42 2.3
21gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 42 2.3
22gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 2.3
23emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j... 40 9.0
24gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, co... 40 9.0
25gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydroge... 40 9.0
26gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete s... 40 9.0
27emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, c... 40 9.0
28gb|AC093066.2| Homo sapiens chromosome 19 clone LLNLR-237C1, com... 40 9.0
29gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, comple... 40 9.0
30gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.0
31gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) g... 40 9.0
32gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 9.0
33emb|AJ342722.1|HSA342722 Homo sapiens genomic sequence surroundi... 40 9.0

>gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA
           sequence
          Length = 936

 Score =  743 bits (375), Expect = 0.0
 Identities = 411/423 (97%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccgacgccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatct 293
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 660 ccgacgccaacttacggcactacaccgacgccatcttacggcactacaccgacgccatct 601

                                                                       
Query: 294 tacggcactacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaag 353
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 600 tacggcactacaccgagcaccccaagtacaccttcccatgatgtccctgcaagtccaaag 541

                                                                       
Query: 354 aagcatggattcattggatcctgcgacttctggaagaatcacccagacgctataattgca 413
           |||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 540 aagcatgggttcattggatcctgcgactactggaagaatcacccagatgctatagttgca 481

                                                                       
Query: 414 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 421

                                                                       
Query: 474 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 361

                                                                       
Query: 534 gccctgatacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttccca 593
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 360 gccctgatacgtgagggggcagctgcatacctcaactccattgtgaacaagaagttccca 301

                                                                       
Query: 594 tttacaacccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgct 653
           ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 300 tttaccacccagcaggtgaaggactgcatcgtcgtggccgtgacctctgatggtgctgct 241

              
Query: 654 tct 656
           |||
Sbjct: 240 tct 238



 Score =  242 bits (122), Expect = 1e-60
 Identities = 154/165 (93%), Gaps = 6/165 (3%)
 Strand = Plus / Minus

                                                                       
Query: 145 cccactatgggggctcaccaactccctcgcatgggtcaggaggaggctacaacccgacac 204
           |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 767 cccactatgggggctcaccaactcccacgcatgggtcaggaggaggctacaatccgacac 708

                                                                       
Query: 205 cgacaccaacttacggtactacaccaacgccgacgccatcttacggcactacaccgacgc 264
           |||||||||||||||| ||||||      |||||||||||||||||||||||||||||||
Sbjct: 707 cgacaccaacttacggcactaca------ccgacgccatcttacggcactacaccgacgc 654

                                                        
Query: 265 catcttatggcactacaccgacgccatcttacggcactacaccga 309
           || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 653 caacttacggcactacaccgacgccatcttacggcactacaccga 609



 Score =  184 bits (93), Expect = 2e-43
 Identities = 112/117 (95%), Gaps = 1/117 (0%)
 Strand = Plus / Minus

                                                                       
Query: 12  ctgcacatactgagnagcaagatgggtggcaaggttcttctgatgagtgctgtcttggtg 71
           ||||||| |||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 881 ctgcacacactgag-agcaagatgggtggcaaggttcttctgatcagtgccgtcttggtg 823

                                                                    
Query: 72  gggcttgtttcactgagctcctgcaggagcctgggagagttgcatgagcagaagacc 128
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 822 gggcttgtttcactgagctcgtgcaggagcctgggagagttgcatgagcagaagacc 766



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>ref|XM_464784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  289 bits (146), Expect = 6e-75
 Identities = 349/417 (83%), Gaps = 6/417 (1%)
 Strand = Plus / Plus

                                                                       
Query: 240 ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 299
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 205 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 264

                                                                       
Query: 300 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 359
           || ||||| |||||||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 265 acgacaccaagcacccccagcacacc------tgatgtccctgaagttccgacaaagcat 318

                                                                       
Query: 360 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 419
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 319 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 378

                                                                       
Query: 420 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 479
           |||||||||||| |||| ||||||||| | ||| |||| |||||| ||||   |||||||
Sbjct: 379 gggtcccttggcgacattggcaagacactcggtactgcttgcagtttgatcactggcaag 438

                                                                       
Query: 480 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 539
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 439 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 498

                                                                       
Query: 540 atacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttcccatttaca 599
            | |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 499 ctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattcccttttacc 558

                                                                    
Query: 600 acccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgcttct 656
           ||||| ||||| ||||| |||||||||||||||  |||||||||| | |||||||||
Sbjct: 559 acccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgcttct 615



 Score =  117 bits (59), Expect = 5e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                       
Query: 40  gcaaggttcttctgatgagtgctgtcttggtggggcttgtttcactgagctcctgcagga 99
           |||||||||||||||| |||| |||| ||||||||||  |||| |||||||| |||||||
Sbjct: 8   gcaaggttcttctgatcagtggtgtcctggtggggctcctttctctgagctcatgcagga 67

                                                      
Query: 100 gcctgggagagttgcatgagcagaagacctactcttcttctac 142
           ||||||||||||||  ||| |||||||||||||||||| ||||
Sbjct: 68  gcctgggagagttgtctgaacagaagacctactcttctactac 110



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 225 acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 284
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 166 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 225

                                  
Query: 285 acgccatcttacggcactacacc 307
           || ||||||||||||||||||||
Sbjct: 226 acaccatcttacggcactacacc 248



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 201 acaccgacaccaacttacggtactacaccaac 232
           ||||| |||||| ||||||| |||||||||||
Sbjct: 220 acaccaacaccatcttacggcactacaccaac 251



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>gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- and threonine-rich
           protein mRNA, complete cds
          Length = 902

 Score =  266 bits (134), Expect = 8e-68
 Identities = 346/417 (82%), Gaps = 6/417 (1%)
 Strand = Plus / Plus

                                                                       
Query: 240 ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 299
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 269 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 328

                                                                       
Query: 300 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 359
           || ||||| ||| |||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 329 acgacaccaagctcccccagcacacc------tgatgtccctgaagttccgacaaagcat 382

                                                                       
Query: 360 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 419
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 383 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 442

                                                                       
Query: 420 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 479
           |||||||||||| |||| |||| |||| | | | |||| |||||| ||||   |||||||
Sbjct: 443 gggtcccttggcgacattggcatgacactcgatactgcttgcagtttgatcactggcaag 502

                                                                       
Query: 480 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 539
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 503 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 562

                                                                       
Query: 540 atacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttcccatttaca 599
            | |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 563 ctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattcccttttacc 622

                                                                    
Query: 600 acccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgcttct 656
           ||||| ||||| ||||| |||||||||||||||  |||||||||| | |||||||||
Sbjct: 623 acccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgcttct 679



 Score =  135 bits (68), Expect = 2e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   tgtctactctgcacatactgagnagcaagatgggtggcaaggttcttctgatgagtgctg 63
           ||||| ||||||| ||||||||   ||||||| || |||||||||||||||| |||| ||
Sbjct: 36  tgtcttctctgcagatactgagagccaagatgagtagcaaggttcttctgatcagtggtg 95

                                                                       
Query: 64  tcttggtggggcttgtttcactgagctcctgcaggagcctgggagagttgcatgagcaga 123
           || ||||||||||  |||| |||||||| |||||||||||||||||||||  ||| ||||
Sbjct: 96  tcctggtggggctcctttctctgagctcatgcaggagcctgggagagttgtctgaacaga 155

                              
Query: 124 agacctactcttcttctac 142
           |||||||||||||| ||||
Sbjct: 156 agacctactcttctactac 174



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 225 acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 284
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 230 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 289

                                  
Query: 285 acgccatcttacggcactacacc 307
           || ||||||||||||||||||||
Sbjct: 290 acaccatcttacggcactacacc 312



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 201 acaccgacaccaacttacggtactacaccaac 232
           ||||| |||||| ||||||| |||||||||||
Sbjct: 284 acaccaacaccatcttacggcactacaccaac 315



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  234 bits (118), Expect = 3e-58
 Identities = 235/274 (85%)
 Strand = Plus / Minus

                                                                           
Query: 383     ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 442
               ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 7323474 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 7323415

                                                                           
Query: 443     gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 502
               |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 7323414 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 7323355

                                                                           
Query: 503     actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 562
               ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 7323354 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 7323295

                                                                           
Query: 563     cctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggactgcat 622
               ||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 7323294 cctcaactccattgtgaacaagaaattcccttttaccacccaacaggttaaggattgcat 7323235

                                                 
Query: 623     cgtcgtggccgcgacctctgatagtgctgcttct 656
               ||||||||||  |||||||||| | |||||||||
Sbjct: 7323234 cgtcgtggccatgacctctgatggcgctgcttct 7323201



 Score =  135 bits (68), Expect = 2e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                           
Query: 4       tgtctactctgcacatactgagnagcaagatgggtggcaaggttcttctgatgagtgctg 63
               ||||| ||||||| ||||||||   ||||||| || |||||||||||||||| |||| ||
Sbjct: 7324237 tgtcttctctgcagatactgagagccaagatgagtagcaaggttcttctgatcagtggtg 7324178

                                                                           
Query: 64      tcttggtggggcttgtttcactgagctcctgcaggagcctgggagagttgcatgagcaga 123
               || ||||||||||  |||| |||||||| |||||||||||||||||||||  ||| ||||
Sbjct: 7324177 tcctggtggggctcctttctctgagctcatgcaggagcctgggagagttgtctgaacaga 7324118

                                  
Query: 124     agacctactcttcttctac 142
               |||||||||||||| ||||
Sbjct: 7324117 agacctactcttctactac 7324099



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 225     acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 284
               |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 7323735 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 7323676

                                      
Query: 285     acgccatcttacggcactacacc 307
               || ||||||||||||||||||||
Sbjct: 7323675 acaccatcttacggcactacacc 7323653



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 240     ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 299
               |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 7323696 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 7323637

                                          
Query: 300     actacaccgagcaccccaagtacacct 326
               || ||||| |||||||| || ||||||
Sbjct: 7323636 acgacaccaagcacccccagcacacct 7323610



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 201     acaccgacaccaacttacggtactacaccaac 232
               ||||| |||||| ||||||| |||||||||||
Sbjct: 7323681 acaccaacaccatcttacggcactacaccaac 7323650



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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  234 bits (118), Expect = 3e-58
 Identities = 235/274 (85%)
 Strand = Plus / Minus

                                                                         
Query: 383   ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 442
             ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 99282 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 99223

                                                                         
Query: 443   gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 502
             |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 99222 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 99163

                                                                         
Query: 503   actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 562
             ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 99162 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 99103

                                                                         
Query: 563   cctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggactgcat 622
             ||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 99102 cctcaactccattgtgaacaagaaattcccttttaccacccaacaggttaaggattgcat 99043

                                               
Query: 623   cgtcgtggccgcgacctctgatagtgctgcttct 656
             ||||||||||  |||||||||| | |||||||||
Sbjct: 99042 cgtcgtggccatgacctctgatggcgctgcttct 99009



 Score =  135 bits (68), Expect = 2e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                          
Query: 4      tgtctactctgcacatactgagnagcaagatgggtggcaaggttcttctgatgagtgctg 63
              ||||| ||||||| ||||||||   ||||||| || |||||||||||||||| |||| ||
Sbjct: 100045 tgtcttctctgcagatactgagagccaagatgagtagcaaggttcttctgatcagtggtg 99986

                                                                          
Query: 64     tcttggtggggcttgtttcactgagctcctgcaggagcctgggagagttgcatgagcaga 123
              || ||||||||||  |||| |||||||| |||||||||||||||||||||  ||| ||||
Sbjct: 99985  tcctggtggggctcctttctctgagctcatgcaggagcctgggagagttgtctgaacaga 99926

                                 
Query: 124    agacctactcttcttctac 142
              |||||||||||||| ||||
Sbjct: 99925  agacctactcttctactac 99907



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 225   acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 284
             |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 99543 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 99484

                                    
Query: 285   acgccatcttacggcactacacc 307
             || ||||||||||||||||||||
Sbjct: 99483 acaccatcttacggcactacacc 99461



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 240   ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 299
             |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 99504 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 99445

                                        
Query: 300   actacaccgagcaccccaagtacacct 326
             || ||||| |||||||| || ||||||
Sbjct: 99444 acgacaccaagcacccccagcacacct 99418



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 201   acaccgacaccaacttacggtactacaccaac 232
             ||||| |||||| ||||||| |||||||||||
Sbjct: 99489 acaccaacaccatcttacggcactacaccaac 99458



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>dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H10, full
           insert sequence
          Length = 377

 Score =  190 bits (96), Expect = 4e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 473 tggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattgg 532
           |||||||||||||| |||| | ||||||||||| ||||||||| |||||||||||| |||
Sbjct: 9   tggcaagaagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactgg 68

                                                                       
Query: 533 cgccctgatacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttccc 592
            || ||| | |||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 69  tgctctgctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattccc 128

                                                                       
Query: 593 atttacaacccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgc 652
            ||||| ||||| ||||| ||||| |||||||||||||||  |||||||||| | |||||
Sbjct: 129 ttttaccacccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgc 188

               
Query: 653 ttct 656
           ||||
Sbjct: 189 ttct 192



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>ref|NM_191846.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1944

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 564  ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 617
            ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 1795 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 1848



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 564      ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 617
                ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 30289314 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 30289367



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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 564   ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 617
             ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 77633 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 77686



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>dbj|AK100192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E12, full
            insert sequence
          Length = 2368

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 564  ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 617
            ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 1884 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 1937



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>gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 347   tccaaagaagcatggattcattg 369
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046



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>gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 347   tccaaagaagcatggattcattg 369
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046



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>gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, complete sequence
          Length = 133790

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 347   tccaaagaagcatggattcattg 369
             |||||||||||||||||||||||
Sbjct: 43691 tccaaagaagcatggattcattg 43669



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>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence
          Length = 203043

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 347   tccaaagaagcatggattcattg 369
             |||||||||||||||||||||||
Sbjct: 91385 tccaaagaagcatggattcattg 91407



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>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    accttcccatgaagtccctgc 343
              |||||||||||||||||||||
Sbjct: 115173 accttcccatgaagtccctgc 115193



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>gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly protein (HydG)
           mRNA, complete cds
          Length = 1704

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 307 cgagcaccccaagtacacctt 327
           |||||||||||||||||||||
Sbjct: 675 cgagcaccccaagtacacctt 695



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>ref|XM_451567.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B00825g predicted mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 579 aacaacaagttcccatttaca 599
           |||||||||||||||||||||
Sbjct: 380 aacaacaagttcccatttaca 360



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>gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete sequence
          Length = 176448

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 498   gatgcactctcaaacactagaactg 522
             ||||||||||||||| |||||||||
Sbjct: 18448 gatgcactctcaaactctagaactg 18472



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 498   gatgcactctcaaacactagaactg 522
             ||||||||||||||| |||||||||
Sbjct: 17278 gatgcactctcaaactctagaactg 17254



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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 579   aacaacaagttcccatttaca 599
             |||||||||||||||||||||
Sbjct: 64663 aacaacaagttcccatttaca 64643



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>gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, complete sequence
          Length = 224673

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 34     tgggtggcaaggttcttctgatgag 58
              ||||||||||||||| |||||||||
Sbjct: 168930 tgggtggcaaggttcatctgatgag 168954



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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 479    gaagctaggaaatatgcatga 499
              |||||||||||||||||||||
Sbjct: 108440 gaagctaggaaatatgcatga 108420



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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 498    gatgcactctcaaacactagaactg 522
              ||||||||||||||| |||||||||
Sbjct: 627720 gatgcactctcaaactctagaactg 627744



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 498    gatgcactctcaaacactagaactg 522
              ||||||||||||||| |||||||||
Sbjct: 626550 gatgcactctcaaactctagaactg 626526



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>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
          Length = 122251

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 583   acaagttcccatttacaacc 602
             ||||||||||||||||||||
Sbjct: 48921 acaagttcccatttacaacc 48940



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>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence
          Length = 43128

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctcctgcaggagcctgggag 108
             ||||||||||||||||||||
Sbjct: 42852 ctcctgcaggagcctgggag 42833



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>gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydrogenase E (aadhE1)
            gene, partial cds
          Length = 3207

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 542  acgcgagggggcagctgcat 561
            ||||||||||||||||||||
Sbjct: 1738 acgcgagggggcagctgcat 1719



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>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence
          Length = 104879

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   aacccgacaccgacaccaac 214
             ||||||||||||||||||||
Sbjct: 15886 aacccgacaccgacaccaac 15867



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>emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, complete sequence
          Length = 158249

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    tggtgctgcatgcagtatga 468
              ||||||||||||||||||||
Sbjct: 114553 tggtgctgcatgcagtatga 114572



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>gb|AC093066.2| Homo sapiens chromosome 19 clone LLNLR-237C1, complete sequence
          Length = 5054

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctcctgcaggagcctgggag 108
            ||||||||||||||||||||
Sbjct: 1337 ctcctgcaggagcctgggag 1318



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>gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, complete sequence
          Length = 17211

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   accttcccatgaagtccctg 342
             ||||||||||||||||||||
Sbjct: 10846 accttcccatgaagtccctg 10827



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 618     tgcatcgtcgtggccgcgac 637
               ||||||||||||||||||||
Sbjct: 5059903 tgcatcgtcgtggccgcgac 5059884



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>gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) gene, complete cds;
           chloroplast gene for chloroplast product
          Length = 2503

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 349 caaagaagcatggattcattggat 372
           |||||||||| |||||||||||||
Sbjct: 701 caaagaagcagggattcattggat 678



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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     aagaagcatggattcattgg 370
               ||||||||||||||||||||
Sbjct: 2827466 aagaagcatggattcattgg 2827485



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>emb|AJ342722.1|HSA342722 Homo sapiens genomic sequence surrounding NotI site, clone NR1-JG2R
          Length = 788

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  ctcctgcaggagcctgggag 108
           ||||||||||||||||||||
Sbjct: 467 ctcctgcaggagcctgggag 448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,648,553
Number of Sequences: 3902068
Number of extensions: 4648553
Number of successful extensions: 79520
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79370
Number of HSP's gapped (non-prelim): 135
length of query: 656
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 633
effective length of database: 17,143,297,704
effective search space: 10851707446632
effective search space used: 10851707446632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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