>CHAC_ECOLI (P39163) Cation transport protein chaC|
          Length = 231

 Score = 82.8 bits (203), Expect = 8e-16
 Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
 Frame = +2

Query: 11  GVLWVFGYGSLIWNPGFDFDDKILGFIKGYKRTFNLACIDHRGTPQHPARTCTLESEDEA 190
           G +W+FGYGSL+WNP  +F +   G + G+ R F L     RGT   P R   L+     
Sbjct: 45  GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRT 104

Query: 191 ICWGIAYCVKGGLEKEREAMQYLERRE----CEYDQKISVDFYKDGNSLEPAVTDVLVFV 358
              G+AY +    E   + +  L +RE    C       +D   DG ++     + +VF+
Sbjct: 105 T--GVAYRLPE--ETLEQELTLLWKREMITGCYLPTWCQLDL-DDGRTV-----NAIVFI 154

Query: 359 STPDPVGNKYYLGPAALEDMARQIATASGPNGYNRDYLFSMEKALSNISHEDDSIIVLAD 538
             P    +  Y      + +A  IA ASGP G N  YLFS+E+ L  +  +DD +  L  
Sbjct: 155 MDP---RHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLV 211

Query: 539 EVRKVLGRS 565
            V+K+L  +
Sbjct: 212 SVKKLLAEN 220

>YEZ3_YEAST (P32656) Hypothetical 26.3 kDa protein in RAD4-CHD1 intergenic|
           region
          Length = 232

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 43/205 (20%)
 Frame = +2

Query: 17  LWVFGYGSLIWNPGFDFDDKILGFIKGYKRTFNLACIDHRGTPQHPARTCTL-------- 172
           +WV GYGSLI+ P   +  +I   I G+ R F  +  DHRGTP +P R  TL        
Sbjct: 8   IWVLGYGSLIYKPPSHYTHRIPAIIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIR 67

Query: 173 -----------------ESEDEAICWGIAYCVKGGLEKEREAMQYLERRECE----YDQK 289
                            +  D+ +  G+ Y +    E  +E  +YL  RE      ++ +
Sbjct: 68  QTAFLKNVNLYSESAPIQDPDDLVTIGVVYYIPP--EHAQEVREYLNVREQNGYTLHEVE 125

Query: 290 ISVDFYKD-----GNSLE---------PAVTDVLVFVSTPDPVGNKYYLGPAALEDMARQ 427
           + ++  ++     G +LE           V    V++ T D   N+ ++GP  +++ A+ 
Sbjct: 126 VHLETNREHEAELGEALEQLPRHNKSGKRVLLTSVYIGTID---NEAFVGPETVDETAKV 182

Query: 428 IATASGPNGYNRDYLFSMEKALSNI 502
           IA + GP+G N +YL  +E+AL+ +
Sbjct: 183 IAVSHGPSGSNYEYLAKLEQALAQM 207

>VG20_BPT4 (P13334) Structural protein of head (Tail tube protein Gp20)|
          Length = 524

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 598 WYVGAGNLLLCRPAQHLPHLIRKHNDRVVFMAYIGQ 491
           WYV  GN+   + A+H+ H++    +RVV+ A  G+
Sbjct: 285 WYVDTGNMPARKAAEHMQHVMNTMKNRVVYDASTGK 320

>LRRC6_MOUSE (O88978) Leucine-rich repeat-containing protein 6 (Leucine-rich|
           testis-specific protein) (Testis-specific leucine-rich
           repeat protein)
          Length = 473

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
 Frame = +2

Query: 206 AYCVKGGLEKEREAMQYLERRECEYDQKISVDF----YKDGNSLEPAVTDVLVFVSTPDP 373
           AYC++   EKE    +  E  E E  +K S  F    Y D ++  P+ T+   +   P+ 
Sbjct: 175 AYCLRRAKEKEEAQRKLEEENESEDKKKSSTGFDGHWYTDIHTACPSATENQDYPQVPET 234

Query: 374 VGNKYYLGPAALEDMARQIATASGPNGYNRDYLFSMEKALSNISHEDDSIIVLADEVRKV 553
              ++       +D+   +A       +N+  LF+ E  L  + H         ++ RK 
Sbjct: 235 QEEQH--NTKESDDIEDDLAF------WNKPSLFTPESRLETLRH--------MEKQRKA 278

Query: 554 LGRSTEKK 577
             + +EKK
Sbjct: 279 QDKLSEKK 286

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 356  VSTPDPVGNKYYLGPAALEDMARQIATASGPNGYNRDYLFSMEKALSN 499
            +S   P G +  LGPA +  + +Q   A GP G +R  L +  + LS+
Sbjct: 3515 LSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSS 3562

>SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 834

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 41  LIWNPGFDFDDKILGFIKGYKRTFNLACIDHRGTPQHPARTCTLESEDEAI 193
           L W+PG   +  + G + GY    + A ++  G P   ARTC LE + +A+
Sbjct: 681 LPWHPGRCAELVVEGRVVGYAGELHPAVLERSGLP---ARTCALELDLDAL 728

>ILVC_CHLTE (Q8KER7) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 330

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 170 LESEDEAICWGIAYCVKGGLEKEREAMQYLERR--ECEYDQKISVDFYKDG 316
           L  E   +C G A  +K G E   EA    E    EC ++ K+ VD Y +G
Sbjct: 191 LFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYEG 241

>ILVC_CHLCH (Q3APC3) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 330

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 170 LESEDEAICWGIAYCVKGGLEKEREA--MQYLERRECEYDQKISVDFYKDG 316
           L  E   +C G A  +K G E   EA   + L   EC ++ K+ VD Y +G
Sbjct: 191 LFGEQAVLCGGSAELIKAGFETLVEAGYPEELAYFECMHELKLIVDLYYEG 241


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,289,414
Number of Sequences: 219361
Number of extensions: 2182252
Number of successful extensions: 6157
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6154
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)