| Clone Name | bags10c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009604.1| Triticum aestivum clone wre1n.pk0082.c6:fis, full insert mRNA sequence Length = 1676 Score = 714 bits (360), Expect = 0.0 Identities = 427/449 (95%), Gaps = 1/449 (0%) Strand = Plus / Plus Query: 1 gaaattggtgcaataggtggcatgtgcgaaagtgtcagccaaccgtgagctcatgagcta 60 |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 212 gaaattggtgcaataggtggca-gtgcgaaagcatcagccaaccgtgagctcatgagcta 270 Query: 61 cagttatggagcccttaagacttacatgcctgaaatggtggaagtgctagttgattgtgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 cagttatggagcccttaagacttacatgcctgaaatggtggaagtgctagttgattgtgt 330 Query: 121 gcggaatccanctttacttgattgggaagnnaaggaagagataatgaaactaaaggcaga 180 | | ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 331 gagaaatcctgctttacttgattgggaagtcaaggaagagataatgaatctaaaggcaga 390 Query: 181 gcttgcagaagcttcaagtaatccggaagctttccttttggatgctcttcattccagtgg 240 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 391 gcttgcagaagcttcaagtaatccggaaactttccttttggatgctcttcattccagtgg 450 Query: 241 ctattctggtgccttggcaaacccattgattgcctcagagtcttcaattagcagattaaa 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 451 ctattctggtgccttggcaaacccattgattgcctcagaggcttcaattagcagattaaa 510 Query: 301 tacagatgttctggaagaatttcttgccttaaactacacttccccgcgaattgttctagc 360 ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 511 taccgatgttctggaagaatttcttgctttgaactacacttccccgcgaattgttctagc 570 Query: 361 tgcatctggtgtggaccacgatgaacttgtatccattgctgaaccactcctgtctgatat 420 ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 571 tgcgtctggtgtggaccacgatgaacttgtatcaattgctgaaccactcctgtctgacat 630 Query: 421 tcgtaccgcaactggaacagtaaagccaa 449 || || ||||||||||||| |||||||| Sbjct: 631 tcccactgcaactggaacaggaaagccaa 659
>gb|AY011123.1| Dactylis glomerata mitochondrial processing peptidase alpha-chain precursor (DGMPP) mRNA, complete cds Length = 1799 Score = 400 bits (202), Expect = e-108 Identities = 355/407 (87%) Strand = Plus / Plus Query: 43 ccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtgga 102 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 539 ccgtgagctcacaagctacagttatggagctctaaagacttacatgcctgaaatggttga 598 Query: 103 agtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaagagat 162 ||| || ||||||||||| |||||||| |||| ||||| ||||||| ||||||||||| Sbjct: 599 agttcttgttgattgtgttcggaatcctgctttgcttgactgggaagtaaaggaagagat 658 Query: 163 aatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttttgga 222 || ||||| ||||||||||||||| ||||||||| |||||| || |||||| ||||| Sbjct: 659 aacaaaactgaaggcagagcttgcaaaagcttcaattaatccaaaaagtttcctcttgga 718 Query: 223 tgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcagagtc 282 || || |||||| ||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 719 cgccctccattccgctggctattctggtgctttggcaaacccattgattgcctcagaagc 778 Query: 283 ttcaattagcagattaaatacagatgttctggaagaatttcttgccttaaactacacttc 342 ||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 779 ttccattagcagattaaatacagatgttctggaagacttcctagctgagaactacacttc 838 Query: 343 cccgcgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgctga 402 | | |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 839 ctctcgaattgttctagctgcatctggtgtcgaccatgatgaacttgtatcaattgctga 898 Query: 403 accactcctgtctgatattcgtaccgcaactggaacagtaaagccaa 449 ||| ||||||||||| |||| | ||||||||||||| |||||||| Sbjct: 899 acctctcctgtctgacattcccaatgcaactggaacagcaaagccaa 945
>ref|NM_189667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2478 Score = 272 bits (137), Expect = 9e-70 Identities = 319/378 (84%), Gaps = 2/378 (0%) Strand = Plus / Plus Query: 41 aaccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtg 100 ||||||||| | |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 1147 aaccgtgagatgatgagctacagttatgcagccctgaaaacttacatgcctgaaatggtt 1206 Query: 101 gaagtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaagag 160 || ||||| |||||||||| || ||||| |||| ||||||||||||| |||||| || Sbjct: 1207 gaggtgcttattgattgtgtacgcaatcctgcttttcttgattgggaagtcaaggaacag 1266 Query: 161 ataatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttttg 220 ||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||||| Sbjct: 1267 ataatgaaactgaaggcagagcttgcagaagcttcaagtaaccctgaaacttttcttttg 1326 Query: 221 gatgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcagag 280 || ||||||||||| | ||| ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1327 gaggctcttcattctactggttattctggtgctttggcaacccctctgattgcctcagaa 1386 Query: 281 tcttcaattagcagattaaatacagatgttctggaagaatttcttgcctta-aactacac 339 || ||| ||||| |||| ||||| |||| || ||| | ||||| || | || ||||| Sbjct: 1387 tcctcagttagccgattgaatacgaatgtcctagaa-tacttcttagctgagaattacac 1445 Query: 340 ttccccgcgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgc 399 | | || |||||||||||||||||| | ||||| || || |||||| | ||||| ||||| Sbjct: 1446 tgctccccgaattgttctagctgcaacaggtgttgatcatgatgaattggtatctattgc 1505 Query: 400 tgaaccactcctgtctga 417 ||||||||| |||||||| Sbjct: 1506 tgaaccacttctgtctga 1523
>dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O10, full insert sequence Length = 2012 Score = 272 bits (137), Expect = 9e-70 Identities = 319/378 (84%), Gaps = 2/378 (0%) Strand = Plus / Plus Query: 41 aaccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtg 100 ||||||||| | |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 591 aaccgtgagatgatgagctacagttatgcagccctgaaaacttacatgcctgaaatggtt 650 Query: 101 gaagtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaagag 160 || ||||| |||||||||| || ||||| |||| ||||||||||||| |||||| || Sbjct: 651 gaggtgcttattgattgtgtacgcaatcctgcttttcttgattgggaagtcaaggaacag 710 Query: 161 ataatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttttg 220 ||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||||| Sbjct: 711 ataatgaaactgaaggcagagcttgcagaagcttcaagtaaccctgaaacttttcttttg 770 Query: 221 gatgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcagag 280 || ||||||||||| | ||| ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 771 gaggctcttcattctactggttattctggtgctttggcaacccctctgattgcctcagaa 830 Query: 281 tcttcaattagcagattaaatacagatgttctggaagaatttcttgcctta-aactacac 339 || ||| ||||| |||| ||||| |||| || ||| | ||||| || | || ||||| Sbjct: 831 tcctcagttagccgattgaatacgaatgtcctagaa-tacttcttagctgagaattacac 889 Query: 340 ttccccgcgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgc 399 | | || |||||||||||||||||| | ||||| || || |||||| | ||||| ||||| Sbjct: 890 tgctccccgaattgttctagctgcaacaggtgttgatcatgatgaattggtatctattgc 949 Query: 400 tgaaccactcctgtctga 417 ||||||||| |||||||| Sbjct: 950 tgaaccacttctgtctga 967
>dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N24, full insert sequence Length = 1991 Score = 272 bits (137), Expect = 9e-70 Identities = 319/378 (84%), Gaps = 2/378 (0%) Strand = Plus / Plus Query: 41 aaccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtg 100 ||||||||| | |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 585 aaccgtgagatgatgagctacagttatgcagccctgaaaacttacatgcctgaaatggtt 644 Query: 101 gaagtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaagag 160 || ||||| |||||||||| || ||||| |||| ||||||||||||| |||||| || Sbjct: 645 gaggtgcttattgattgtgtacgcaatcctgcttttcttgattgggaagtcaaggaacag 704 Query: 161 ataatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttttg 220 ||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||||| Sbjct: 705 ataatgaaactgaaggcagagcttgcagaagcttcaagtaaccctgaaacttttcttttg 764 Query: 221 gatgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcagag 280 || ||||||||||| | ||| ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 765 gaggctcttcattctactggttattctggtgctttggcaacccctctgattgcctcagaa 824 Query: 281 tcttcaattagcagattaaatacagatgttctggaagaatttcttgcctta-aactacac 339 || ||| ||||| |||| ||||| |||| || ||| | ||||| || | || ||||| Sbjct: 825 tcctcagttagccgattgaatacgaatgtcctagaa-tacttcttagctgagaattacac 883 Query: 340 ttccccgcgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgc 399 | | || |||||||||||||||||| | ||||| || || |||||| | ||||| ||||| Sbjct: 884 tgctccccgaattgttctagctgcaacaggtgttgatcatgatgaattggtatctattgc 943 Query: 400 tgaaccactcctgtctga 417 ||||||||| |||||||| Sbjct: 944 tgaaccacttctgtctga 961
>gb|AY108609.1| Zea mays PCO088346 mRNA sequence Length = 2030 Score = 184 bits (93), Expect = 2e-43 Identities = 340/422 (80%), Gaps = 1/422 (0%) Strand = Plus / Plus Query: 1 gaaattggtgcaataggtggcatgtgcgaaagtgtcagccaaccgtgagctcatgagcta 60 ||||||| ||||||||||||| |||| |||| || || | ||||||| | |||||||| Sbjct: 568 gaaattgaggcaataggtggca-gtgccaaagcatctgctagccgtgagatgatgagcta 626 Query: 61 cagttatggagcccttaagacttacatgcctgaaatggtggaagtgctagttgattgtgt 120 || ||| |||||||| ||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 627 cacttacggagccctgaagacttacatgcctgaaatggttgaggtgcttattgattgtgt 686 Query: 121 gcggaatccanctttacttgattgggaagnnaaggaagagataatgaaactaaaggcaga 180 || || || |||| ||||||||||| | |||||| |||| ||| ||| ||||||| Sbjct: 687 acgcaaccctgcttttcttgattgggaggtcaaggaacagattttgaggctacaggcaga 746 Query: 181 gcttgcagaagcttcaagtaatccggaagctttccttttggatgctcttcattccagtgg 240 ||||||| || | |||||| ||| ||| ||| |||||||| ||||||||||| | ||| Sbjct: 747 gcttgcaaaatcatcaagttttcctgaaaattttcttttggaggctcttcattctactgg 806 Query: 241 ctattctggtgccttggcaaacccattgattgcctcagagtcttcaattagcagattaaa 300 |||||||||||| || ||||| ||| | |||| |||| | |||| |||||||||| || Sbjct: 807 ctattctggtgctttagcaaatccactaattgtgccagaatattcagttagcagattgaa 866 Query: 301 tacagatgttctggaagaatttcttgccttaaactacacttccccgcgaattgttctagc 360 | ||||||| |||||| ||||| | | ||||||||| | | |||||||||||||| Sbjct: 867 tgcagatgtcctggaacaatttataactgagaactacactgcttcccgaattgttctagc 926 Query: 361 tgcatctggtgtggaccacgatgaacttgtatccattgctgaaccactcctgtctgatat 420 |||||| ||||| || || |||||| | ||||| ||||| ||||| || |||||||| || Sbjct: 927 tgcatcaggtgttgatcatgatgaattggtatctattgccgaaccccttctgtctgacat 986 Query: 421 tc 422 || Sbjct: 987 tc 988
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 145 bits (73), Expect = 1e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 159 agataatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttt 218 ||||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||| Sbjct: 4892405 agataatgaaactgaaggcagagcttgcagaagcttcaagtaaccctgaaacttttcttt 4892464 Query: 219 tggatgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcag 278 |||| ||||||||||| | ||| ||||||||||| ||||||| ||| |||||||||||| Sbjct: 4892465 tggaggctcttcattctactggttattctggtgctttggcaacccctctgattgcctcag 4892524 Query: 279 agtcttcaattagcagattaaatac 303 | || ||| ||||| |||| ||||| Sbjct: 4892525 aatcctcagttagccgattgaatac 4892549 Score = 111 bits (56), Expect = 2e-21 Identities = 101/117 (86%) Strand = Plus / Plus Query: 41 aaccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtg 100 ||||||||| | |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 4892198 aaccgtgagatgatgagctacagttatgcagccctgaaaacttacatgcctgaaatggtt 4892257 Query: 101 gaagtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaa 157 || ||||| |||||||||| || ||||| |||| ||||||||||||| |||||| Sbjct: 4892258 gaggtgcttattgattgtgtacgcaatcctgcttttcttgattgggaagtcaaggaa 4892314 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 347 cgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgctgaacca 406 |||||||||||||||||| | ||||| || || |||||| | ||||| |||||||||||| Sbjct: 4892692 cgaattgttctagctgcaacaggtgttgatcatgatgaattggtatctattgctgaacca 4892751 Query: 407 ctcctgtctga 417 || |||||||| Sbjct: 4892752 cttctgtctga 4892762
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 145 bits (73), Expect = 1e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 159 agataatgaaactaaaggcagagcttgcagaagcttcaagtaatccggaagctttccttt 218 ||||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||| Sbjct: 137054 agataatgaaactgaaggcagagcttgcagaagcttcaagtaaccctgaaacttttcttt 137113 Query: 219 tggatgctcttcattccagtggctattctggtgccttggcaaacccattgattgcctcag 278 |||| ||||||||||| | ||| ||||||||||| ||||||| ||| |||||||||||| Sbjct: 137114 tggaggctcttcattctactggttattctggtgctttggcaacccctctgattgcctcag 137173 Query: 279 agtcttcaattagcagattaaatac 303 | || ||| ||||| |||| ||||| Sbjct: 137174 aatcctcagttagccgattgaatac 137198 Score = 111 bits (56), Expect = 2e-21 Identities = 101/117 (86%) Strand = Plus / Plus Query: 41 aaccgtgagctcatgagctacagttatggagcccttaagacttacatgcctgaaatggtg 100 ||||||||| | |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 136847 aaccgtgagatgatgagctacagttatgcagccctgaaaacttacatgcctgaaatggtt 136906 Query: 101 gaagtgctagttgattgtgtgcggaatccanctttacttgattgggaagnnaaggaa 157 || ||||| |||||||||| || ||||| |||| ||||||||||||| |||||| Sbjct: 136907 gaggtgcttattgattgtgtacgcaatcctgcttttcttgattgggaagtcaaggaa 136963 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 347 cgaattgttctagctgcatctggtgtggaccacgatgaacttgtatccattgctgaacca 406 |||||||||||||||||| | ||||| || || |||||| | ||||| |||||||||||| Sbjct: 137341 cgaattgttctagctgcaacaggtgttgatcatgatgaattggtatctattgctgaacca 137400 Query: 407 ctcctgtctga 417 || |||||||| Sbjct: 137401 cttctgtctga 137411
>gb|AC151795.1| Ornithorhynchus anatinus chromosome UNK clone OABb-95A1, complete sequence Length = 106226 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 tttcttgccttaaactacacttccc 344 |||||||||| |||||||||||||| Sbjct: 54364 tttcttgcctgaaactacacttccc 54388
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence Length = 168350 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccttggcaaacccattgattg 272 ||||||||||||||||||||| Sbjct: 119986 ccttggcaaacccattgattg 120006
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete sequence Length = 155911 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ctggaagaatttcttgcctt 330 |||||||||||||||||||| Sbjct: 30398 ctggaagaatttcttgcctt 30379
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ctggaagaatttcttgcctt 330 |||||||||||||||||||| Sbjct: 26163 ctggaagaatttcttgcctt 26182
>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence Length = 130946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttaaatacagatgttctgga 315 |||||||||||||||||||| Sbjct: 59332 ttaaatacagatgttctgga 59313
>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence Length = 195696 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aaggaagagataatgaaact 171 |||||||||||||||||||| Sbjct: 153615 aaggaagagataatgaaact 153596
>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence Length = 155637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttaaatacagatgttctgga 315 |||||||||||||||||||| Sbjct: 15249 ttaaatacagatgttctgga 15230
>emb|AL136116.11| Human DNA sequence from clone RP1-95L4 on chromosome 6 Contains the 3' end of the gene for androgen induced protein (AIG-1) (CGI-103) (includes FLJ10485), a pseudogene similar to actin genes, a ribosomal protein L31 (RPL31) pseudogene and a pseudogene similar to hypothetical proteins PRO2207 and similar to presenilins associated rhomboid-like protein, complete sequence Length = 100815 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gatgttctggaagaatttct 324 |||||||||||||||||||| Sbjct: 16749 gatgttctggaagaatttct 16768
>emb|Y16624.1|SSP16624 Sus sp. PMAP-23 gene, exon 1 to exon 4 Length = 3253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tcttgccttaaactacactt 341 |||||||||||||||||||| Sbjct: 2897 tcttgccttaaactacactt 2916
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gaagaatttcttgccttaaa 333 |||||||||||||||||||| Sbjct: 884594 gaagaatttcttgccttaaa 884613
>gb|AC153550.10| Mus musculus 10 BAC RP23-250H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 168208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tcttgccttaaactacactt 341 |||||||||||||||||||| Sbjct: 103758 tcttgccttaaactacactt 103777
>gb|AC093154.2| Homo sapiens chromosome 1 clone RP3-445O10, complete sequence Length = 145658 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gattaaatacagatgttctg 313 |||||||||||||||||||| Sbjct: 72531 gattaaatacagatgttctg 72550
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tcttgccttaaactacactt 341 |||||||||||||||||||| Sbjct: 8880 tcttgccttaaactacactt 8861
>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence Length = 198162 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ttaaatacagatgttctgga 315 |||||||||||||||||||| Sbjct: 24992 ttaaatacagatgttctgga 25011 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,609,433 Number of Sequences: 3902068 Number of extensions: 3609433 Number of successful extensions: 98952 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98886 Number of HSP's gapped (non-prelim): 63 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)