| Clone Name | bags10b16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474291.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 387 bits (195), Expect = e-104 Identities = 402/471 (85%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 906 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 965 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 966 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 1025 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 1026 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 1085 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 1086 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 1145 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 1146 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 1205 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 1206 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 1265 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 1266 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 1325 Query: 438 ttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1326 ctgctcagcgagcaagaacagcccattgagcgtgaaggctttgaagcgcac 1376
>dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E09, full insert sequence Length = 1766 Score = 387 bits (195), Expect = e-104 Identities = 402/471 (85%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 1010 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 1069 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 1070 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 1129 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 1130 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 1189 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 1190 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 1249 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 1250 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 1309 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 1310 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 1369 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 1370 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 1429 Query: 438 ttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1430 ctgctcagcgagcaagaacagcccattgagcgtgaaggctttgaagcgcac 1480
>dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA for oryzain beta, complete cds Length = 1675 Score = 387 bits (195), Expect = e-104 Identities = 402/471 (85%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 922 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 981 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 982 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 1041 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 1042 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 1101 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 1102 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 1161 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 1162 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 1221 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 1222 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 1281 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 1282 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 1341 Query: 438 ttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1342 ctgctcagcgagcaagaacagcccattgagcgtgaaggctttgaagcgcac 1392
>dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I21, full insert sequence Length = 1742 Score = 379 bits (191), Expect = e-102 Identities = 401/471 (85%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 986 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 1045 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 1046 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 1105 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 1106 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 1165 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 1166 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 1225 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 1226 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 1285 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| | |||||| ||||||| |||||||| |||||||| Sbjct: 1286 cggcttcaggaatctctgcttggtttcgggctgttgcccagttgaaggtgcaacctgctg 1345 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 1346 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 1405 Query: 438 ttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1406 ctgctcagcgagcaagaacagcccattgagcgtgaaggctttgaagcgcac 1456
>dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D09, full insert sequence Length = 1753 Score = 379 bits (191), Expect = e-102 Identities = 401/471 (85%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 1011 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 1070 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 1071 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 1130 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 1131 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 1190 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 1191 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 1250 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 1251 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 1310 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 1311 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 1370 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 1371 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 1430 Query: 438 ttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||| |||||||||||| || |||||||||||||||||||||| Sbjct: 1431 ctgctcagcgagcaagaacagcccattgtgcgtgaaggctttgaagcgcac 1481
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 329 bits (166), Expect = 6e-87 Identities = 364/430 (84%) Strand = Plus / Minus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 119612 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 119553 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 119552 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 119493 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 119492 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 119433 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 119432 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 119373 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 119372 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 119313 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 119312 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 119253 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 119252 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 119193 Query: 438 ttgctcagcg 447 ||||||||| Sbjct: 119192 ctgctcagcg 119183 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 323 tcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaagg 382 ||||||||| ||| | |||||||| |||||||| | || || |||||||||||||||| Sbjct: 152532 tcaggaaccactgcatcgtgtggggatgctgccccgtcgagggcgccacctgctgcaagg 152591 Query: 383 atcattccagctgctgcccaccggactaccccgtctgcaac 423 |||| |||| ||||||||| ||| || |||||||||||| Sbjct: 152592 atcactccacctgctgccccaaggagtatcccgtctgcaac 152632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||||| ||||||||||||||||||||||||| Sbjct: 118870 caagaacagcccattgagcgtgaaggctttgaagcgcac 118832 Score = 40.1 bits (20), Expect = 8.1 Identities = 104/132 (78%) Strand = Plus / Plus Query: 60 ctactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgcat 119 |||||||| || |||||||| ||||| || ||||||| ||| || ||| ||||||| Sbjct: 152293 ctactggacggtgcgcaactcgtgggggcccgactggggcgagaacggctacatccgcat 152352 Query: 120 ggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatgatgtcatcgtaccc 179 |||||||||| ||| || | || || |||||||| || ||||||||| | || ||||| Sbjct: 152353 ggagcgcaacgtcaccgcgcgcaccggcaagtgcggcatcgccatgatggcgtcctaccc 152412 Query: 180 caccaagaaggg 191 | ||||||||| Sbjct: 152413 gatcaagaaggg 152424
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 329 bits (166), Expect = 6e-87 Identities = 364/430 (84%) Strand = Plus / Minus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 34208230 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 34208171 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 34208170 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 34208111 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 34208110 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 34208051 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 34208050 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 34207991 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 34207990 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 34207931 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 34207930 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 34207871 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 34207870 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 34207811 Query: 438 ttgctcagcg 447 ||||||||| Sbjct: 34207810 ctgctcagcg 34207801 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 323 tcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaagg 382 ||||||||| ||| | |||||||| |||||||| | || || |||||||||||||||| Sbjct: 34241150 tcaggaaccactgcatcgtgtggggatgctgccccgtcgagggcgccacctgctgcaagg 34241209 Query: 383 atcattccagctgctgcccaccggactaccccgtctgcaac 423 |||| |||| ||||||||| ||| || |||||||||||| Sbjct: 34241210 atcactccacctgctgccccaaggagtatcccgtctgcaac 34241250 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 33158154 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 33158095 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 33158094 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 33158035 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 33158034 caagtgcgg 33158026 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||||| ||||||||||||||||||||||||| Sbjct: 34207488 caagaacagcccattgagcgtgaaggctttgaagcgcac 34207450 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Minus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 33157856 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 33157797 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 33157796 cacgagtaccccatctgcaa 33157777 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcc 245 ||||||||||||||||||||| Sbjct: 33180719 ctcgccgccgacgccgcctcc 33180699 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 19563123 cctcgccgccgccgccgcctcctcc 19563147 Score = 40.1 bits (20), Expect = 8.1 Identities = 104/132 (78%) Strand = Plus / Plus Query: 60 ctactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgcat 119 |||||||| || |||||||| ||||| || ||||||| ||| || ||| ||||||| Sbjct: 34240911 ctactggacggtgcgcaactcgtgggggcccgactggggcgagaacggctacatccgcat 34240970 Query: 120 ggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatgatgtcatcgtaccc 179 |||||||||| ||| || | || || |||||||| || ||||||||| | || ||||| Sbjct: 34240971 ggagcgcaacgtcaccgcgcgcaccggcaagtgcggcatcgccatgatggcgtcctaccc 34241030 Query: 180 caccaagaaggg 191 | ||||||||| Sbjct: 34241031 gatcaagaaggg 34241042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcc 242 |||||||||||||||||||| Sbjct: 31391724 ccctcgccgccgacgccgcc 31391743
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 329 bits (166), Expect = 6e-87 Identities = 364/430 (84%) Strand = Plus / Minus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||||||| || || ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 58932 tggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaa 58873 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgt 137 ||| ||||| || || ||||| ||| |||| ||| | |||||||||||||| ||||| || Sbjct: 58872 ctcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgt 58813 Query: 138 gaccagtgggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaa 197 ||||| |||||||| || || ||||||||| |||| ||||| ||||||| || || || Sbjct: 58812 gaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaa 58753 Query: 198 cccacccaagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccc 257 ||||||||||||| | ||||| ||||| | || || || || ||||| ||| |||||| Sbjct: 58752 cccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccc 58693 Query: 258 tgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgtt 317 |||||| |||||||| || |||||||| ||||| || |||||||||||||||||| | || Sbjct: 58692 tgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcatt 58633 Query: 318 cggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctg 377 |||||||||||| || ||| |||| |||||||| ||||||| |||||||| |||||||| Sbjct: 58632 cggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctg 58573 Query: 378 caaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggac 437 |||||||||| ||||||||||||| || |||||||| |||||||||| | ||||||| || Sbjct: 58572 caaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaac 58513 Query: 438 ttgctcagcg 447 ||||||||| Sbjct: 58512 ctgctcagcg 58503 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||||||||||| ||||||||||||||||||||||||| Sbjct: 58190 caagaacagcccattgagcgtgaaggctttgaagcgcac 58152
>gb|AF366556.1| Oryza sativa saline responsive OSSRIII protein mRNA, partial cds Length = 368 Score = 278 bits (140), Expect = 2e-71 Identities = 293/344 (85%) Strand = Plus / Plus Query: 145 gggaagtgcgggatagccatgatgtcatcgtaccccaccaagaagggtgctaacccaccc 204 |||||||| || || ||||||||| |||| ||||| ||||||| || || ||||||||| Sbjct: 6 gggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaacccaccc 65 Query: 205 aagccagccccgacacctccctcgccgccgacgccgcctcctccagtcgcccctgaccac 264 |||||| | ||||| ||||| | || || || || ||||| ||| |||||||||||| Sbjct: 66 aagccatctccgactcctccaactcctccaacaccacctcccccatccgcccctgaccat 125 Query: 265 gtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgctcgttcggcttc 324 |||||||| || |||||||| ||||| || |||||||||||||||||| | ||||||||| Sbjct: 126 gtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcattcggcttc 185 Query: 325 aggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaaggat 384 ||||| || ||| |||| |||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 186 aggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctgcaaggat 245 Query: 385 cattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggacttgctca 444 ||| ||||||||||||| || |||||||| |||||||||| | ||||||| || |||||| Sbjct: 246 catgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaacctgctca 305 Query: 445 gcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcac 488 |||| |||||||||||| ||||||||||||||||||| ||||| Sbjct: 306 gcgagcaagaacagcccattgagcgtgaaggctttgaaacgcac 349
>gb|AY106278.1| Zea mays PCO137999 mRNA sequence Length = 1382 Score = 228 bits (115), Expect = 2e-56 Identities = 208/239 (87%) Strand = Plus / Plus Query: 253 gcccctgaccacgtctgcgacgagaacttctcatgccctgcaggcagcacctgctgctgc 312 ||||||||| | |||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 895 gcccctgacaatgtctgcgacgagaacttctcgtgctccgcgggcagcacctgctgctgc 954 Query: 313 tcgttcggcttcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacc 372 |||| |||||||||||| | ||| |||| |||||||||||||| | || || |||||| Sbjct: 955 gcgtttggcttcaggaacgtctgcttggtctggggctgctgcccggtcgagggcgccacc 1014 Query: 373 tgctgcaaggatcattccagctgctgcccaccggactaccccgtctgcaacatcagggct 432 |||||||||||||| ||||||||||||| |||| |||||| ||||||||| |||| ||| Sbjct: 1015 tgctgcaaggatcacgccagctgctgcccgccgggctaccctgtctgcaacgtcagagct 1074 Query: 433 gggacttgctcagcgaccaagaacagcccgctgagcgtgaaggctttgaagcgcaccct 491 || |||||||| | || |||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1075 ggaacttgctcggtgagcaagaacagcccactgagcgtcaaggccttgaagcgcaccct 1133 Score = 103 bits (52), Expect = 6e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 46 gagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagaggct 105 |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 703 gagaacgggaaggactactggatcgtccgcaactcgtggggcccgaagtggggcgaggct 762 Query: 106 gggtacctccgcatggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatg 165 || ||| |||| |||||| | ||| |||||| | || ||||||||||||||| || ||| Sbjct: 763 ggttacatccgtatggagaggaacgtcaacgccagcactgggaagtgcgggatcgcgatg 822 Query: 166 atgtcatcgtaccccaccaagaagggtgctaacccaccca 205 ||| | || ||||| || |||||||| || ||||| |||| Sbjct: 823 atggcgtcctacccgacgaagaagggcgcgaaccctccca 862
>emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease (pCYSPROT gene) Length = 412 Score = 85.7 bits (43), Expect = 2e-13 Identities = 50/51 (98%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 2 ggcacacaactcgacc-tggtgtggttgctgttggctatggcactgagaac 51 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 362 ggcacacaactcgaccatggtgtggttgctgttggctatggcactgagaac 412
>ref|XM_474296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 323 tcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaagg 382 ||||||||| ||| | |||||||| |||||||| | || || |||||||||||||||| Sbjct: 1238 tcaggaaccactgcatcgtgtggggatgctgccccgtcgagggcgccacctgctgcaagg 1297 Query: 383 atcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggacttgct 442 |||| |||| ||||||||| ||| || |||||||||||| || |||| | ||||||| Sbjct: 1298 atcactccacctgctgccccaaggagtatcccgtctgcaacgccaaggctcgcacttgct 1357 Query: 443 cagcgaccaagaacagcccg 462 | || ||||||||||||| Sbjct: 1358 ccaagagcaagaacagcccg 1377 Score = 40.1 bits (20), Expect = 8.1 Identities = 104/132 (78%) Strand = Plus / Plus Query: 60 ctactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgcat 119 |||||||| || |||||||| ||||| || ||||||| ||| || ||| ||||||| Sbjct: 999 ctactggacggtgcgcaactcgtgggggcccgactggggcgagaacggctacatccgcat 1058 Query: 120 ggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatgatgtcatcgtaccc 179 |||||||||| ||| || | || || |||||||| || ||||||||| | || ||||| Sbjct: 1059 ggagcgcaacgtcaccgcgcgcaccggcaagtgcggcatcgccatgatggcgtcctaccc 1118 Query: 180 caccaagaaggg 191 | ||||||||| Sbjct: 1119 gatcaagaaggg 1130
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full insert sequence Length = 1722 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 323 tcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaagg 382 ||||||||| ||| | |||||||| |||||||| | || || |||||||||||||||| Sbjct: 1349 tcaggaaccactgcatcgtgtggggatgctgccccgtcgagggcgccacctgctgcaagg 1408 Query: 383 atcattccagctgctgcccaccggactaccccgtctgcaacatcagggctgggacttgct 442 |||| |||| ||||||||| ||| || |||||||||||| || |||| | ||||||| Sbjct: 1409 atcactccacctgctgccccaaggagtatcccgtctgcaacgccaaggctcgcacttgct 1468 Query: 443 cagcgaccaagaacagcccg 462 | || ||||||||||||| Sbjct: 1469 ccaagagcaagaacagcccg 1488 Score = 40.1 bits (20), Expect = 8.1 Identities = 104/132 (78%) Strand = Plus / Plus Query: 60 ctactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgcat 119 |||||||| || |||||||| ||||| || ||||||| ||| || ||| ||||||| Sbjct: 1110 ctactggacggtgcgcaactcgtgggggcccgactggggcgagaacggctacatccgcat 1169 Query: 120 ggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatgatgtcatcgtaccc 179 |||||||||| ||| || | || || |||||||| || ||||||||| | || ||||| Sbjct: 1170 ggagcgcaacgtcaccgcgcgcaccggcaagtgcggcatcgccatgatggcgtcctaccc 1229 Query: 180 caccaagaaggg 191 | ||||||||| Sbjct: 1230 gatcaagaaggg 1241
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 876 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 935 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 936 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 995 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 996 caagtgcgg 1004 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1174 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 1233 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 1234 cacgagtaccccatctgcaa 1253
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 941 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 1000 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 1001 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 1060 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 1061 caagtgcgg 1069 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1239 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 1298 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 1299 cacgagtaccccatctgcaa 1318
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 941 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 1000 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 1001 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 1060 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 1061 caagtgcgg 1069 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1239 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 1298 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 1299 cacgagtaccccatctgcaa 1318
>dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B12, full insert sequence Length = 976 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 143 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 202 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 203 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 262 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 263 caagtgcgg 271 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 441 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 500 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 501 cacgagtaccccatctgcaa 520
>gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mRNA, partial cds Length = 490 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 22 gtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactca 81 |||||||| || || ||||||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 426 gtggttgccgtcggttatggcactgacaatggcaaagactactggatcgtccgcaactct 485 Query: 82 tgggg 86 ||||| Sbjct: 486 tgggg 490
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 48547 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 48488 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 48487 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 48428 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 48427 caagtgcgg 48419 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Minus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 48249 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 48190 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 48189 cacgagtaccccatctgcaa 48170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcc 245 ||||||||||||||||||||| Sbjct: 71205 ctcgccgccgacgccgcctcc 71185
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 323 tcaggaacctttgcctggtgtggggctgctgcccagcggaaggtgccacctgctgcaagg 382 ||||||||| ||| | |||||||| |||||||| | || || |||||||||||||||| Sbjct: 23789 tcaggaaccactgcatcgtgtggggatgctgccccgtcgagggcgccacctgctgcaagg 23848 Query: 383 atcattccagctgctgcccaccggactaccccgtctgcaac 423 |||| |||| ||||||||| ||| || |||||||||||| Sbjct: 23849 atcactccacctgctgccccaaggagtatcccgtctgcaac 23889 Score = 40.1 bits (20), Expect = 8.1 Identities = 104/132 (78%) Strand = Plus / Plus Query: 60 ctactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgcat 119 |||||||| || |||||||| ||||| || ||||||| ||| || ||| ||||||| Sbjct: 23550 ctactggacggtgcgcaactcgtgggggcccgactggggcgagaacggctacatccgcat 23609 Query: 120 ggagcgcaacatcaacgtgaccagtgggaagtgcgggatagccatgatgtcatcgtaccc 179 |||||||||| ||| || | || || |||||||| || ||||||||| | || ||||| Sbjct: 23610 ggagcgcaacgtcaccgcgcgcaccggcaagtgcggcatcgccatgatggcgtcctaccc 23669 Query: 180 caccaagaaggg 191 | ||||||||| Sbjct: 23670 gatcaagaaggg 23681
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 921 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 980 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 981 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 1040 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 1041 caagtgcgg 1049 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1219 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 1278 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 1279 cacgagtaccccatctgcaa 1298
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 27 tgctgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||| || ||||| ||||| ||||||||||||||||| || | ||||| ||||| Sbjct: 40804 tgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 40745 Query: 87 tccaaactggggagaggctgggtacctccgcatggagcgcaacatcaacgtgaccagtgg 146 | |||||| ||| | || ||| |||| ||||||||||||||||| | || |||||| Sbjct: 40744 caagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtgg 40685 Query: 147 gaagtgcgg 155 |||||||| Sbjct: 40684 caagtgcgg 40676 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Minus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 ||||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 40506 tggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccct 40447 Query: 403 ccggactaccccgtctgcaa 422 | || |||||| ||||||| Sbjct: 40446 cacgagtaccccatctgcaa 40427 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcc 245 ||||||||||||||||||||| Sbjct: 63368 ctcgccgccgacgccgcctcc 63348
>emb|AJ007579.1|RNI7579 Ribes nigrum mRNA for putative cysteine proteinase, partial Length = 995 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||||| ||||||||| |||||||| || || || ||| ||||||||||| | || Sbjct: 207 tggtgtggctgctgttgggtatggcacagaaaatggtgtggattactggattgtaaggaa 266 Query: 78 ctcatggggtccaaactggggagag 102 |||||||||| ||| |||||||||| Sbjct: 267 ctcatggggtgcaagctggggagag 291
>ref|NM_112826.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT3G19390 mRNA, complete cds Length = 1577 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggaga 101 |||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 945 gactactggattgttcgtaactcatggggatcaaactggggaga 988
>ref|NM_103612.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G47128 mRNA, complete cds Length = 1764 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 977 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 1036
>ref|NM_123672.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT5G43060 mRNA, complete cds Length = 1675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 19 ggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaac 78 ||||| || ||||| || ||||| || |||||||| ||||||||||||||||| | ||| Sbjct: 938 ggtgttgtggctgtgggttatggaaccgagaacggaaaggactactggattgtgagaaac 997 Query: 79 tcatgggg 86 |||||||| Sbjct: 998 tcatgggg 1005 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcg 485 ||||||||| ||| | |||||||||||||| ||||| Sbjct: 1351 caagaacagtccgtttagcgtgaaggctttaaagcg 1386
>gb|AY251055.1| Anthurium andraeanum senescence-associated cysteine protease mRNA, complete cds Length = 1703 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||| ||||| || || |||||||| |||| || |||||||||||||| || | || Sbjct: 935 tggtgttgttgcagtaggatatggcacggagagtgggaaggactactggatcgtgaggaa 994 Query: 78 ctcatggggtccaaactggggagaggctgggtacctccgcatggagcg 125 ||| |||||| || ||||||||||||||| ||| || | |||||||| Sbjct: 995 ctcgtggggtaaaagctggggagaggctggatacatcagaatggagcg 1042
>gb|AY371181.1| Trichomonas vaginalis TVGCN20 (gcn20) pseudogene, partial sequence; and papain-like cysteine proteinase (cp2.5.1.1) gene, complete cds Length = 2891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 59 actactggattgtccgcaactcatgggg 86 |||||||||||||||||||||||||||| Sbjct: 2051 actactggattgtccgcaactcatgggg 2024
>gb|AY133781.1| Arabidopsis thaliana clone U11707 putative cysteine proteinase RD21A (At1g47128) mRNA, complete cds Length = 1420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 916 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 975
>gb|AY072130.1| Arabidopsis thaliana putative cysteine proteinase RD21A (At1g47128) mRNA, complete cds Length = 1656 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 976 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 1035
>dbj|AB252653.1| Platycodon grandiflorus PgCP1 mRNA for cysteine proteinase, complete cds Length = 1676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 30 tgttggctatggcactgagaacggcaaggactactggattgtccgcaactcatggggtcc 89 |||||||||||| ||||| || || || ||||||||||| || | |||||||||||| | Sbjct: 917 tgttggctatggtactgaaaaagggaaagactactggatcgtgaggaactcatggggttc 976 Query: 90 aaactggggaga 101 || ||||||||| Sbjct: 977 aagctggggaga 988 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 342 gtggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccc 401 |||||| ||||||||| || |||||||||||||| | ||||||| || |||||||| Sbjct: 1214 gtggggatgctgcccacttgacggtgccacctgctgtgatgatcattatagttgctgccc 1273 Query: 402 accggactaccccgtctgcaa 422 || |||||||| || ||||| Sbjct: 1274 acacgactaccctgtatgcaa 1294
>gb|AY114661.1| Arabidopsis thaliana cysteine protease component of protease-inhibitor complex (At5g43060) mRNA, complete cds Length = 1485 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 19 ggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaac 78 ||||| || ||||| || ||||| || |||||||| ||||||||||||||||| | ||| Sbjct: 895 ggtgttgtggctgtgggttatggaaccgagaacggaaaggactactggattgtgagaaac 954 Query: 79 tcatgggg 86 |||||||| Sbjct: 955 tcatgggg 962 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcg 485 ||||||||| ||| | |||||||||||||| ||||| Sbjct: 1308 caagaacagtccgtttagcgtgaaggctttaaagcg 1343
>gb|AY093350.1| Arabidopsis thaliana cysteine proteinase (At3g19400) mRNA, complete cds Length = 1414 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggaga 101 |||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 910 gactactggattgttcgtaactcatggggatcaaactggggaga 953
>gb|AY081730.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, complete cds Length = 1389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 916 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 975
>gb|AY062725.1| Arabidopsis thaliana cysteine proteinase (At3g19400; MLD14.12) mRNA, complete cds Length = 1575 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggaga 101 |||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 945 gactactggattgttcgtaactcatggggatcaaactggggaga 988
>gb|AY062608.1| Arabidopsis thaliana cysteine protease component of protease-inhibitor complex (At5g43060; MMG4.7) mRNA, complete cds Length = 1628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 19 ggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaac 78 ||||| || ||||| || ||||| || |||||||| ||||||||||||||||| | ||| Sbjct: 939 ggtgttgtggctgtgggttatggaaccgagaacggaaaggactactggattgtgagaaac 998 Query: 79 tcatgggg 86 |||||||| Sbjct: 999 tcatgggg 1006 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcg 485 ||||||||| ||| | |||||||||||||| ||||| Sbjct: 1352 caagaacagtccgtttagcgtgaaggctttaaagcg 1387
>dbj|AK221689.1| Arabidopsis thaliana mRNA for cysteine proteinase RD21A, complete cds, clone: RAFL14-97-J18 Length = 1644 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 976 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 1035
>gb|AY039606.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, complete cds Length = 1604 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 974 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 1033
>emb|BX823701.1|CNS0A4SS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZG08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggaga 101 |||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 927 gactactggattgttcgtaactcatggggatcaaactggggaga 970
>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete sequence Length = 133379 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 115631 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 115572
>gb|AF454957.1| Brassica oleracea senescence-associated cysteine protease (CP2) mRNA, complete cds Length = 1699 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatgggg 86 ||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 940 actgagaacggaaaggactactggattgtgagaaactcatgggg 983 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 agcgtgaaggctttgaagcg 485 |||||||||||||||||||| Sbjct: 1339 agcgtgaaggctttgaagcg 1358
>dbj|D13043.1|ATHRD21A Arabidopsis thaliana rd21A gene for thiol protease, complete cds Length = 4161 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 43 actgagaacggcaaggactactggattgtccgcaactcatggggtccaaactggggagag 102 |||||||||||||| || ||||||||||| | |||||||||||| || |||||||||| Sbjct: 3216 actgagaacggcaaagattactggattgtgagaaactcatggggtaaaagctggggagag 3275
>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14 Length = 83097 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggaga 101 |||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 37457 gactactggattgttcgtaactcatggggatcaaactggggaga 37500
>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4 Length = 79046 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 19 ggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaac 78 ||||| || ||||| || ||||| || |||||||| ||||||||||||||||| | ||| Sbjct: 16304 ggtgttgtggctgtgggttatggaaccgagaacggaaaggactactggattgtgagaaac 16245 Query: 79 tcatgggg 86 |||||||| Sbjct: 16244 tcatgggg 16237 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 450 caagaacagcccgctgagcgtgaaggctttgaagcg 485 ||||||||| ||| | |||||||||||||| ||||| Sbjct: 15807 caagaacagtccgtttagcgtgaaggctttaaagcg 15772
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1328 tggggctgctgcccgctcgagggcgccacctgctgcgacgatcactacagctgctgcccc 1387 Query: 403 ccggactaccccgtctgcaacatcagg 429 | ||||||||| |||||||| ||||| Sbjct: 1388 catgactaccccatctgcaacgtcagg 1414 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 gagaacggcaaggactactggat 68 ||||||||||||||||||||||| Sbjct: 1049 gagaacggcaaggactactggat 1071
>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds Length = 1830 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1293 tggggctgctgcccgctcgagggcgccacctgctgcgacgatcactacagctgctgcccc 1352 Query: 403 ccggactaccccgtctgcaacatcagg 429 | ||||||||| |||||||| ||||| Sbjct: 1353 catgactaccccatctgcaacgtcagg 1379 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 gagaacggcaaggactactggat 68 ||||||||||||||||||||||| Sbjct: 1014 gagaacggcaaggactactggat 1036
>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor complex, complete cds Length = 1828 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || |||||||||||| | ||||| | |||||||||||| Sbjct: 1292 tggggctgctgcccgctcgagggcgccacctgctgcgacgatcactacagctgctgcccc 1351 Query: 403 ccggactaccccgtctgcaacatcagg 429 | ||||||||| |||||||| ||||| Sbjct: 1352 catgactaccccatctgcaacgtcagg 1378 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 gagaacggcaaggactactggat 68 ||||||||||||||||||||||| Sbjct: 1013 gagaacggcaaggactactggat 1035
>gb|AY491402.1| Capsicum annuum cysteine protease mRNA, partial sequence Length = 662 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgt 71 |||||||||||||||||| ||||| |||||||| || | ||| || |||||||| Sbjct: 147 tggtgtggttgctgttggatatggtactgagaatggtatggattattggattgt 200
>gb|AF133838.1| Sandersonia aurantiaca papain-like cysteine protease (PRT15) mRNA, partial cds Length = 1456 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 34 ggctatggcactgagaacggcaaggactactggattgtccgcaactcatggggt 87 |||||||| |||||| |||||||||||||||||||| | |||||||||||| Sbjct: 619 ggctatggttctgagagtggcaaggactactggattgttagaaactcatggggt 672 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 361 gaaggtgccacctgctgcaaggatcattccagctgctgccc 401 ||||||||||||||||| | ||||| || ||||||||||| Sbjct: 928 gaaggtgccacctgctgtgatgatcactctagctgctgccc 968
>dbj|AB098631.1| Daucus carota DcCysP8 mRNA for cysteine protease, complete cds Length = 1884 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 ||||||||| | |||||| ||||| || || ||||| || || ||||||||||| | || Sbjct: 1016 tggtgtggtagttgttggttatggtacagaaaacggtaaagattactggattgtgaggaa 1075 Query: 78 ctcatggggtccaaactggggagag 102 |||||||||| | ||||||||||| Sbjct: 1076 ctcatggggtgcggactggggagag 1100
>dbj|AB098629.1| Daucus carota DcCysP6 mRNA for cysteine protease, complete cds Length = 1748 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 ||||||||| | |||||| ||||| || || || || || || ||||||||||| | || Sbjct: 932 tggtgtggtggttgttggatatggtacagaaaatggtaaagattactggattgtgaggaa 991 Query: 78 ctcatggggtccaaactggggagag 102 |||||||||| || ||||||||||| Sbjct: 992 ctcatggggtgcagactggggagag 1016
>dbj|AB098627.1| Daucus carota DcCysP4 mRNA for cysteine protease, complete cds Length = 1668 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 367 gccacctgctgcaaggatcattccagctgctgcccac 403 |||||||||||| | ||||| |||||||||||||||| Sbjct: 1218 gccacctgctgcgatgatcactccagctgctgcccac 1254
>ref|XM_415920.1| PREDICTED: Gallus gallus similar to KIAA0664 protein (LOC417675), mRNA Length = 5549 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 560 ctgtgtggagcttttctccctcct 583 |||||||||||||||||||||||| Sbjct: 955 ctgtgtggagcttttctccctcct 978
>gb|AY072712.1| Oryza sativa Ramy1 (ramy1) mRNA, complete cds Length = 785 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 298 cgacacctccctcgccgccgacg 276
>ref|XM_533261.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein U (LOC476053), mRNA Length = 3318 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 218 cacctccctcgccgccgacgccgcctcctcc 248 ||||||| ||||||||| ||||||||||||| Sbjct: 549 cacctccatcgccgccgccgccgcctcctcc 519
>ref|XM_766129.1| Giardia lamblia ATCC 50803 cathepsin B (GLP_447_16146_15244) partial mRNA Length = 903 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggagaggctgggtacctccgc 117 ||||||||||| |||||||||| |||||||| ||||||| |||| || ||| ||||| Sbjct: 778 gactactggatcatccgcaactcctggggtcctgactggggcgaggacggctacttccgc 837 Query: 118 atg 120 ||| Sbjct: 838 atg 840
>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome Length = 324746 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 caactcgacctggtgtggttgct 30 ||||||||||||||||||||||| Sbjct: 5147 caactcgacctggtgtggttgct 5169
>emb|AJ303074.1|CGR303074 Cricetulus griseus partial mRNA for cathepsin Z (ctsz gene) Length = 1334 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 61 tactggattgtccgcaactcatggggt 87 |||||||||||||| |||||||||||| Sbjct: 862 tactggattgtccgtaactcatggggt 888
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 120716 cgacacctccctcgccgccgacg 120738
>gb|AF320565.1|AF320565 Rhodnius prolixus cathepsine L-like cysteine protease mRNA, complete cds Length = 1098 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 31 gttggctatggcactgagaacggcaaggactactggattgtccgcaactcatggggtcca 90 ||||| ||||||||||| || ||| | || |||||| ||||| ||||||||||| ||| Sbjct: 902 gttggttatggcactgaaaatggccaagattactggcttgtcaagaactcatgggggcca 961 Query: 91 aactggggaga 101 | ||||||||| Sbjct: 962 agctggggaga 972
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 caactcgacctggtgtggttgct 30 ||||||||||||||||||||||| Sbjct: 1162429 caactcgacctggtgtggttgct 1162407
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 8545563 cgacacctccctcgccgccgacg 8545585 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctcca 249 ||||||| ||||||||||||||| |||||| Sbjct: 27262703 cctcccttgccgccgacgccgccgcctcca 27262674 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 26494057 cctcgccgccgccgccgcctcctcc 26494081 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gccgccgacgccgcctcctcc 248 ||||||||||||||||||||| Sbjct: 21281014 gccgccgacgccgcctcctcc 21280994 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 14166835 cctcgccgccgccgccgcctcctcc 14166811 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 31808797 ctcgccgccgccgccgcctcctcc 31808820 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 ctccctcgccgccgacgccgcctcctcc 248 ||||||| ||||||||||| |||||||| Sbjct: 24708422 ctccctcaccgccgacgccacctcctcc 24708449
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 caactcgacctggtgtggttgct 30 ||||||||||||||||||||||| Sbjct: 909014 caactcgacctggtgtggttgct 909036
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 caactcgacctggtgtggttgct 30 ||||||||||||||||||||||| Sbjct: 908335 caactcgacctggtgtggttgct 908357
>dbj|AK119698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D03, full insert sequence Length = 799 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 307 cgacacctccctcgccgccgacg 285
>dbj|AK069098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B04, full insert sequence Length = 806 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 308 cgacacctccctcgccgccgacg 286
>gb|U46138.1|OSU46138 Oryza sativa Zn-induced protein (RezA) mRNA, complete cds Length = 791 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgacacctccctcgccgccgacg 237 ||||||||||||||||||||||| Sbjct: 281 cgacacctccctcgccgccgacg 259
>gb|L08500.1|PFACYSPROT Plasmodium vinckei cysteine proteinase gene sequence Length = 1629 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tcatggggtccaaactggggaga 101 ||||||||||||||||||||||| Sbjct: 1482 tcatggggtccaaactggggaga 1504
>ref|XM_464258.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2961 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcc 245 |||||||||||||||||||||| Sbjct: 378 cctcgccgccgacgccgcctcc 399
>ref|NM_191922.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 220 cctccctcgccgccgacgccgcctcctcca 249 ||||||| ||||||||||||||| |||||| Sbjct: 895 cctcccttgccgccgacgccgccgcctcca 924
>ref|XM_958673.1| Neurospora crassa OR74A hypothetical protein (NCU02086.1) partial mRNA Length = 1689 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 220 cctccctcgccgccgacgccgcctcctcca 249 ||||||||||||||| ||||||| |||||| Sbjct: 1364 cctccctcgccgccgccgccgccgcctcca 1393
>ref|XM_329275.1| Neurospora crassa OR74A hypothetical protein (NCU02086.1) partial mRNA Length = 1689 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 220 cctccctcgccgccgacgccgcctcctcca 249 ||||||||||||||| ||||||| |||||| Sbjct: 1364 cctccctcgccgccgccgccgccgcctcca 1393
>ref|XM_762135.1| Giardia lamblia ATCC 50803 protease (GLP_113_4299_5381) partial mRNA Length = 1083 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactggggagagg 103 |||||||||| |||||||||||| ||||| || ||||||| |||| Sbjct: 958 gactactggactgtccgcaactcctggggccctgactggggtgagg 1003
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcc 245 |||||||||||||||||||||| Sbjct: 3695066 cctcgccgccgacgccgcctcc 3695087
>gb|AY561759.1| Streptomyces sp. M664 N-acylhomoserine lactone-degrading acylase (ahlM) gene, complete cds Length = 2616 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 tcgccgccgacgccgcctcctc 247 |||||||||||||||||||||| Sbjct: 866 tcgccgccgacgccgcctcctc 845
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctcca 249 ||||||| ||||||||||||||| |||||| Sbjct: 43220 cctcccttgccgccgacgccgccgcctcca 43191
>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G09 Length = 140067 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcc 245 |||||||||||||||||||||| Sbjct: 35383 cctcgccgccgacgccgcctcc 35404
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcc 245 |||||||||||||||||||||| Sbjct: 176356 cctcgccgccgacgccgcctcc 176377
>ref|XM_550544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2699 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 1939 cctcgccgccgccgccgcctcctcc 1915
>ref|XM_550525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2043 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 1554 cctcgccgccgccgccgcctcctcc 1530
>ref|NM_193511.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 gccgccgacgccgcctcctcc 248 ||||||||||||||||||||| Sbjct: 530 gccgccgacgccgcctcctcc 550
>ref|XM_477904.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 606 cctcgccgccgccgccgcctcctcc 582
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 128470 cctcgccgccgccgccgcctcctcc 128494 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 122873 ctcgccgccgccgccgcctcctcc 122850
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 32448 cctcgccgccgtcgccgcctcctcc 32472
>gb|BC012217.1| Mus musculus splicing factor, arginine/serine rich 9, mRNA (cDNA clone MGC:7233 IMAGE:3483731), complete cds Length = 1193 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcctc 247 ||||||||||||||||||||| Sbjct: 76 cgccgccgacgccgcctcctc 56
>gb|DQ006737.1| Euastacus maidae voucher KC2729 28S ribosomal RNA gene, partial sequence Length = 557 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 327 cctcgccgccgccgccgcctcctcc 303
>gb|DQ006736.1| Euastacus maidae voucher KC2658 28S ribosomal RNA gene, partial sequence Length = 476 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 246 cctcgccgccgccgccgcctcctcc 222
>gb|BC009616.2| Homo sapiens DENN/MADD domain containing 1A, mRNA (cDNA clone IMAGE:3905823), partial cds Length = 2117 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcc 245 |||||||||||||| |||||||||| Sbjct: 103 ctccctcgccgccgccgccgcctcc 79
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 27332241 cctcgccgccgtcgccgcctcctcc 27332265
>gb|AC113542.13| Mus musculus chromosome 5, clone RP23-195A18, complete sequence Length = 215127 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 74145 tccctcgccgccgccgccgcctcct 74121
>ref|XM_844652.1| PREDICTED: Canis familiaris similar to twinfilin-like protein, transcript variant 3 (LOC484740), mRNA Length = 2098 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 227 cgccgccgacgccgcctcctccagtcgcc 255 |||||||| ||||||||||||||| |||| Sbjct: 255 cgccgccgccgccgcctcctccagccgcc 283
>ref|XM_854531.1| PREDICTED: Canis familiaris similar to twinfilin-like protein, transcript variant 4 (LOC484740), mRNA Length = 2381 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 227 cgccgccgacgccgcctcctccagtcgcc 255 |||||||| ||||||||||||||| |||| Sbjct: 255 cgccgccgccgccgcctcctccagccgcc 283
>gb|AC109586.2| Homo sapiens chromosome 3 clone CTD-2008P21, complete sequence Length = 190170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gtgtggggctgctgcccagcg 360 ||||||||||||||||||||| Sbjct: 143393 gtgtggggctgctgcccagcg 143373
>emb|AJ245924.1|STU245924 Solanum tuberosum mRNA for cysteine protease (cyp gene) Length = 1755 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||| ||||||| ||| ||||| ||||||| |||| ||| || |||||||| | || Sbjct: 894 tggtgtagttgctgctggatatggttctgagaatggcatggattattggattgttaggaa 953 Query: 78 ctcatgggg 86 ||||||||| Sbjct: 954 ctcatgggg 962
>ref|NM_025573.2| Mus musculus splicing factor, arginine/serine rich 9 (Sfrs9), mRNA Length = 1193 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcctc 247 ||||||||||||||||||||| Sbjct: 76 cgccgccgacgccgcctcctc 56
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 34352 cctcgccgccgccgccgcctcctcc 34376
>gb|DQ430402.1| Sorghum propinquum locus pSHR0111.4 genomic sequence Length = 718 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430401.1| Sorghum bicolor voucher PI585454 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430400.1| Sorghum bicolor voucher PI267539 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430399.1| Sorghum bicolor voucher PI267408 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430398.1| Sorghum bicolor voucher PI221607 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430397.1| Sorghum bicolor voucher PI152702 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430396.1| Sorghum bicolor voucher NSL92371 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430395.1| Sorghum bicolor voucher NSL87902b locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430394.1| Sorghum bicolor voucher NSL87902a locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430393.1| Sorghum bicolor voucher NSL87666b locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430392.1| Sorghum bicolor voucher NSL87666a locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430391.1| Sorghum bicolor voucher NSL77217 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430390.1| Sorghum bicolor voucher NSL77034 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430389.1| Sorghum bicolor voucher NSL56174 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430388.1| Sorghum bicolor voucher NSL56003 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430387.1| Sorghum bicolor voucher NSL55243 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430386.1| Sorghum bicolor voucher NSL51365 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430385.1| Sorghum bicolor voucher NSL51030 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430384.1| Sorghum bicolor voucher NSL50875 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|DQ430383.1| Sorghum bicolor voucher BTx623 locus pSHR0111.4 genomic sequence Length = 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 343 tggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccca 402 |||||||||||||| || || ||||||||||| | ||||| | |||||||||||| Sbjct: 23 tggggctgctgcccgctcgagggcgccacctgctgtgacgatcactacagctgctgcccc 82 Query: 403 ccggactaccccgtctgcaac 423 | ||||||||| |||||||| Sbjct: 83 catgactaccccatctgcaac 103
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05, complete sequence Length = 175061 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 149413 cctcgccgccgccgccgcctcctcc 149437
>dbj|AK159190.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007N06 product:splicing factor, arginine/serine rich 9, full insert sequence Length = 1158 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcctc 247 ||||||||||||||||||||| Sbjct: 74 cgccgccgacgccgcctcctc 54
>ref|NM_024820.2| Homo sapiens DENN/MADD domain containing 1A (DENND1A), transcript variant 2, mRNA Length = 2166 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcc 245 |||||||||||||| |||||||||| Sbjct: 91 ctccctcgccgccgccgccgcctcc 67
>ref|NM_020946.1| Homo sapiens DENN/MADD domain containing 1A (DENND1A), transcript variant 1, mRNA Length = 5041 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcc 245 |||||||||||||| |||||||||| Sbjct: 91 ctccctcgccgccgccgccgcctcc 67
>dbj|AK144573.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730002D07 product:slit homolog 2 (Drosophila), full insert sequence Length = 6564 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 125 tccctcgccgccgccgccgcctcct 101
>dbj|AK084293.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230018J08 product:unclassifiable, full insert sequence Length = 2493 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 103 tccctcgccgccgccgccgcctcct 79
>dbj|AK084012.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130076F04 product:slit homolog 2 (Drosophila), full insert sequence Length = 3209 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 121 tccctcgccgccgccgccgcctcct 97
>tpg|BK000350.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M70 transposase gene, complete cds Length = 11211 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 5469 cctcgccgccgccgccgcctcctcc 5493
>dbj|AK053913.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130320P19 product:slit homolog 2 (Drosophila), full insert sequence Length = 3264 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 125 tccctcgccgccgccgccgcctcct 101
>dbj|AK011621.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029M16 product:splicing factor, arginine/serine rich 9 (25 kDa), full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcctc 247 ||||||||||||||||||||| Sbjct: 36 cgccgccgacgccgcctcctc 16
>dbj|AK053182.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030026O16 product:slit homolog 2 (Drosophila), full insert sequence Length = 3350 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcct 246 ||||||||||||| ||||||||||| Sbjct: 125 tccctcgccgccgccgccgcctcct 101
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 3377568 cctcgccgccgccgccgcctcctcc 3377592 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcctcct 246 |||||||||||| ||||||||||| Sbjct: 17108638 ccctcgccgccggcgccgcctcct 17108661
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccctcgccgccgacgccgcct 243 ||||||||||||||||||||| Sbjct: 11446505 ccctcgccgccgacgccgcct 11446485 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcct 246 |||||||||||||||||||| Sbjct: 23944552 cgccgccgacgccgcctcct 23944533
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 15375288 cctcgccgccgccgccgcctcctcc 15375264
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 1045790 cctcgccgccgccgccgcctcctcc 1045814 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 959424 cctcgccgccgccgccgcctcctcc 959448 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 3865242 cctccctcgccgccgccgccgccgcctc 3865215 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 3827186 cctccctcgccgccgccgccgccgcctc 3827159
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 27898053 cctcgccgccgccgccgcctcctcc 27898077 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 27892456 ctcgccgccgccgccgcctcctcc 27892433
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 27423564 cctcgccgccgtcgccgcctcctcc 27423588
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 83768 cctcgccgccgccgccgcctcctcc 83792
>gb|AF454956.1| Brassica oleracea senescence-associated cysteine protease (CP1) mRNA, partial cds Length = 1582 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 58 gactactggattgtccgcaactcatggggtccaaactgggg 98 |||||||||||| | || ||||||||||| |||||||||| Sbjct: 890 gactactggattattcgtaactcatggggatcaaactgggg 930
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gccgccgacgccgcctcctcc 248 ||||||||||||||||||||| Sbjct: 2952 gccgccgacgccgcctcctcc 2932
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gccgccgacgccgcctcctcc 248 ||||||||||||||||||||| Sbjct: 178523 gccgccgacgccgcctcctcc 178503
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccctcgccgccgacgccgcct 243 ||||||||||||||||||||| Sbjct: 639 ccctcgccgccgacgccgcct 619
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 82287 cctcgccgccgccgccgcctcctcc 82263
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 22013 cctcgccgccgccgccgcctcctcc 22037
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 102676 cctcgccgccgccgccgcctcctcc 102700
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 108663 cctcgccgccgccgccgcctcctcc 108687 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 22297 cctcgccgccgccgccgcctcctcc 22321
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 106549 cctcgccgccgccgccgcctcctcc 106525
>gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, complete sequence Length = 183861 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cgccgccgacgccgcctcctc 247 ||||||||||||||||||||| Sbjct: 152993 cgccgccgacgccgcctcctc 153013
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccctcgccgccgacgccgcct 243 ||||||||||||||||||||| Sbjct: 60494 ccctcgccgccgacgccgcct 60474
>dbj|AK024782.1| Homo sapiens cDNA: FLJ21129 fis, clone CAS06266 Length = 2139 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcc 245 |||||||||||||| |||||||||| Sbjct: 79 ctccctcgccgccgccgccgcctcc 55
>gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85O21, complete sequence Length = 177555 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcc 245 |||||||||||||| |||||||||| Sbjct: 102720 ctccctcgccgccgccgccgcctcc 102696
>dbj|AK108816.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-E06, full insert sequence Length = 1503 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aggactactggattgtccgcaactc 80 |||||||||||||||| |||||||| Sbjct: 945 aggactactggattgtgcgcaactc 969
>dbj|AK067271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099C04, full insert sequence Length = 2699 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 1939 cctcgccgccgccgccgcctcctcc 1915
>gb|AF181567.1|AF181567 Solanum chacoense cysteine protease CYP1 (CYP1) mRNA, partial cds Length = 630 Score = 42.1 bits (21), Expect = 2.0 Identities = 69/85 (81%) Strand = Plus / Plus Query: 18 tggtgtggttgctgttggctatggcactgagaacggcaaggactactggattgtccgcaa 77 |||||| |||| || ||| ||||| |||||||| |||| ||| || ||||| || | || Sbjct: 279 tggtgtagttgttgctggatatggtactgagaatggcatggattattggatcgttaggaa 338 Query: 78 ctcatggggtccaaactggggagag 102 ||||||||| | |||||||||||| Sbjct: 339 ctcatggggagctaactggggagag 363
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 3377489 cctcgccgccgccgccgcctcctcc 3377513 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcctcct 246 |||||||||||| ||||||||||| Sbjct: 17117678 ccctcgccgccggcgccgcctcct 17117701
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 cctcgccgccgacgccgcctcctcc 248 ||||||||||| ||||||||||||| Sbjct: 13849 cctcgccgccgccgccgcctcctcc 13873
>gb|U17135.1|DCU17135 Dianthus caryophyllus cysteine proteinase (DCCP1) mRNA, partial cds Length = 1628 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 50 acggcaaggactactggattgtccgcaactcatgggg 86 |||| ||||||||||||||||| | ||||||||||| Sbjct: 801 acgggaaggactactggattgtaagaaactcatgggg 837
>gb|AY700588.1| Zingiber officinale cysteine protease gp3b mRNA, complete cds Length = 1575 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 370 acctgctgcaaggatcattccagctgctgccc 401 |||||||||||||| || | |||||||||||| Sbjct: 1255 acctgctgcaaggaccactacagctgctgccc 1286
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 catcagggctgggacttgct 442 |||||||||||||||||||| Sbjct: 699123 catcagggctgggacttgct 699142
>ref|XM_483028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcct 246 |||||||||||||||||||| Sbjct: 27 cgccgccgacgccgcctcct 8
>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase (OSJNBa0001K12.13), mRNA Length = 2271 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccctcgccgccgacgccgcctcct 246 |||||||||||| ||||||||||| Sbjct: 67 ccctcgccgccggcgccgcctcct 44
>ref|NM_191299.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 1061 ctcgccgccgccgccgcctcctcc 1038
>ref|NM_192834.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 ctccctcgccgccgacgccgcctcctcc 248 ||||||| ||||||||||| |||||||| Sbjct: 1302 ctccctcaccgccgacgccacctcctcc 1275
>gb|AC118630.8| Mus musculus chromosome 14, clone RP24-92O1, complete sequence Length = 212974 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 actcatggggtccaaactgg 96 |||||||||||||||||||| Sbjct: 111304 actcatggggtccaaactgg 111323
>ref|XM_874594.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 18 (LOC540926), mRNA Length = 3222 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 2046 catggggtccaaactgggga 2027
>ref|XM_864892.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 2 (LOC540926), mRNA Length = 3314 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 2138 catggggtccaaactgggga 2119
>ref|XM_874434.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 17 (LOC540926), mRNA Length = 3323 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 2147 catggggtccaaactgggga 2128
>ref|XM_874351.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 16 (LOC540926), mRNA Length = 3377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 2201 catggggtccaaactgggga 2182
>ref|XM_874270.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 15 (LOC540926), mRNA Length = 2932 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 1756 catggggtccaaactgggga 1737
>ref|XM_613714.2| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 1 (LOC540926), mRNA Length = 2890 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 1714 catggggtccaaactgggga 1695
>ref|XM_874094.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 14 (LOC540926), mRNA Length = 3053 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 1877 catggggtccaaactgggga 1858
>ref|XM_874002.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 13 (LOC540926), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 579 catggggtccaaactgggga 560
>ref|XM_873908.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 12 (LOC540926), mRNA Length = 1529 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 353 catggggtccaaactgggga 334
>ref|XM_873623.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 9 (LOC540926), mRNA Length = 3245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 2069 catggggtccaaactgggga 2050
>ref|XM_873424.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on midleg homolog 1), transcript variant 7 (LOC540926), mRNA Length = 3094 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 catggggtccaaactgggga 99 |||||||||||||||||||| Sbjct: 1918 catggggtccaaactgggga 1899
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence Length = 194800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctttgcctggtgtggggctg 350 |||||||||||||||||||| Sbjct: 8796 ctttgcctggtgtggggctg 8777
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 150256 ctcgccgccgccgccgcctcctcc 150279
>gb|AY371180.1| Trichomonas vaginalis papain-like cysteine proteinase (cp1.2.1.1) gene, partial cds; and inositol hexakisphosphate kinase (ip6k2) gene, complete cds Length = 3037 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 aaggactactggattgtccgcaactcatgggg 86 |||||||||||| |||| || ||||||||||| Sbjct: 640 aaggactactggcttgttcgtaactcatgggg 671
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cacctccctcgccgccgacg 237 |||||||||||||||||||| Sbjct: 59199 cacctccctcgccgccgacg 59180
>ref|XM_548191.2| PREDICTED: Canis familiaris similar to Tumor necrosis factor receptor superfamily member 16 precursor (Low-affinity nerve growth factor receptor) (NGF receptor) (Gp80-LNGFR) (p75 ICD) (Low affinity neurotrophin receptor p75NTR) (LOC491071), mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 tgtggagcttttctccctcc 582 |||||||||||||||||||| Sbjct: 847 tgtggagcttttctccctcc 828
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctttgcctggtgtggggctg 350 |||||||||||||||||||| Sbjct: 155769 ctttgcctggtgtggggctg 155750
>gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome 12, complete sequence Length = 194104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gccgccgacgccgcctcctc 247 |||||||||||||||||||| Sbjct: 187612 gccgccgacgccgcctcctc 187631
>emb|AL031781.1|HS51J12 Human DNA sequence from clone RP1-51J12 on chromosome 6q26-27 Contains the 3' part of the alternatively spliced gene for the human orthologs of mouse QKI-7 and QKI-7B (KH Domain RNA Binding proteins) and zebrafish ZKQ-1 (Quaking protein homolog), complete sequence Length = 117813 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aaggatcattccagctgctg 398 |||||||||||||||||||| Sbjct: 44256 aaggatcattccagctgctg 44237
>emb|X77219.1|TVCP2 T.vaginalis CP2 mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 actactggattgtccgcaactcatgggg 86 |||||||||| ||||||||||| ||||| Sbjct: 863 actactggatcgtccgcaactcctgggg 890
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 Length = 347213 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tgagcgtgaaggctttgaag 483 |||||||||||||||||||| Sbjct: 135284 tgagcgtgaaggctttgaag 135303
>emb|AL935165.5| Zebrafish DNA sequence from clone CH211-198D18 in linkage group 4 Contains the cugbp2 gene for CUG triplet repeat, RNA binding protein 2, the 5' end of a novel gene and a CpG island, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 ctgtgtggagcttttctccc 579 |||||||||||||||||||| Sbjct: 9155 ctgtgtggagcttttctccc 9136
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08, complete sequence Length = 148860 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcc 242 |||||||||||||||||||| Sbjct: 88532 ccctcgccgccgacgccgcc 88551
>gb|BC012202.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, mRNA (cDNA clone IMAGE:4181241), partial cds Length = 1001 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcctcca 249 |||| |||||||| |||||||||||||| Sbjct: 692 tcccgcgccgccgccgccgcctcctcca 665
>emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in linkage group 17, complete sequence Length = 162064 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 ctgtgtggagcttttctccc 579 |||||||||||||||||||| Sbjct: 100055 ctgtgtggagcttttctccc 100074
>dbj|AK074888.1| Homo sapiens cDNA FLJ90407 fis, clone NT2RP2006269, highly similar to Protein O-mannosyl-transferase 1 (EC2.4.1.109) Length = 2904 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cagggctgggacttgctcag 445 |||||||||||||||||||| Sbjct: 2639 cagggctgggacttgctcag 2620
>dbj|AK056008.1| Homo sapiens cDNA FLJ31446 fis, clone NT2NE2000909, highly similar to GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA SUBUNIT 1 Length = 2167 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 tccctcgccgccgacgccgcctcctcca 249 |||| |||||||| |||||||||||||| Sbjct: 357 tcccgcgccgccgccgccgcctcctcca 384
>dbj|AK145396.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0036F07 product:unclassifiable, full insert sequence Length = 746 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 158 ctcgccgccgccgccgcctcctcc 135
>dbj|AK145344.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0015L23 product:unclassifiable, full insert sequence Length = 746 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 158 ctcgccgccgccgccgcctcctcc 135
>ref|XM_683099.1| PREDICTED: Danio rerio similar to zinc finger protein 91 (HPF7, HTF10) (LOC559733), mRNA Length = 6768 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tgaccacgtctgcgacgagaactt 281 |||||||||||| ||||||||||| Sbjct: 1771 tgaccacgtctgtgacgagaactt 1748
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccctcgccgccgacgccgcctcct 246 |||||||||||| ||||||||||| Sbjct: 83698 ccctcgccgccggcgccgcctcct 83675
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tgccctgcaggcagcacctg 305 |||||||||||||||||||| Sbjct: 3282055 tgccctgcaggcagcacctg 3282074
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcc 242 |||||||||||||||||||| Sbjct: 2491196 ccctcgccgccgacgccgcc 2491215
>gb|AC022084.6|AC022084 Homo sapiens chromosome 15 clone CTD-2151I2 map 15q21.1, complete sequence Length = 84724 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aaggatcattccagctgctg 398 |||||||||||||||||||| Sbjct: 19460 aaggatcattccagctgctg 19441
>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence Length = 177771 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 22060 ctcgccgccgccgccgcctcctcc 22083
>gb|AC090522.1|AC090522 Caenorhabditis briggsae cosmid CB015K23, complete sequence Length = 46455 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 cacggcatgaagtcgtcgagggaa 527 ||||||| |||||||||||||||| Sbjct: 14924 cacggcacgaagtcgtcgagggaa 14901
>gb|AC084757.2|AC084757 Homo sapiens chromosome 15 clone RP11-227D13 map 15q21.1, complete sequence Length = 157348 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aaggatcattccagctgctg 398 |||||||||||||||||||| Sbjct: 93932 aaggatcattccagctgctg 93913
>gb|AC079411.6| Homo sapiens chromosome 16 clone CTD-2050B12, complete sequence Length = 114356 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tccctcgccgccgacgccgcctcctcca 249 |||| |||||||| |||||||||||||| Sbjct: 74621 tcccgcgccgccgccgccgcctcctcca 74594
>gb|AC084526.1|CBRG21D19 Caenorhabditis briggsae cosmid G21D19, complete sequence Length = 42422 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 cacggcatgaagtcgtcgagggaa 527 ||||||| |||||||||||||||| Sbjct: 31219 cacggcacgaagtcgtcgagggaa 31196
>gb|AC084515.1|CBRG17N15 Caenorhabditis briggsae cosmid G17N15, complete sequence Length = 40280 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 cacggcatgaagtcgtcgagggaa 527 ||||||| |||||||||||||||| Sbjct: 38385 cacggcacgaagtcgtcgagggaa 38362
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 ctccctcgccgccgacgccgcctcctcc 248 ||||||| ||||||||||| |||||||| Sbjct: 134385 ctccctcaccgccgacgccacctcctcc 134412
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ctcgccgccgacgccgcctcctcc 248 |||||||||| ||||||||||||| Sbjct: 86835 ctcgccgccgccgccgcctcctcc 86858
>gb|AY973616.1| Manihot esculenta cysteine protease CP1 mRNA, complete cds Length = 1831 Score = 40.1 bits (20), Expect = 8.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 342 gtggggctgctgcccagcggaaggtgccacctgctgcaaggatcattccagctgctgccc 401 |||||| ||||||||| || ||||| |||||||| | || |||| ||||||||||| Sbjct: 1241 gtggggatgctgcccacttgagggtgctacctgctgtgaagaccattatagctgctgccc 1300 Query: 402 accggactaccccgtctgcaacat 425 || ||||| ||| |||||||||| Sbjct: 1301 acatgactatcccatctgcaacat 1324
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cctggtgtggggctgctgcc 355 |||||||||||||||||||| Sbjct: 45450 cctggtgtggggctgctgcc 45431
>gb|AC022898.11| Homo sapiens chromosome 15, clone RP11-554D20, complete sequence Length = 200380 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 cttttctccctcctgcacac 589 |||||||||||||||||||| Sbjct: 57412 cttttctccctcctgcacac 57431
>gb|AF330148.1| Trichomonas vaginalis cysteine proteinase 1.2.1.1-like DNA sequence Length = 843 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 55 aaggactactggattgtccgcaactcatgggg 86 |||||||||||| |||| || ||||||||||| Sbjct: 227 aaggactactggcttgttcgtaactcatgggg 196
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 ctccctcgccgccgacgccgcctcctcc 248 ||||||| ||||||||||| |||||||| Sbjct: 76999 ctccctcaccgccgacgccacctcctcc 77026
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 123196 cctccctcgccgccgccgccgccgcctc 123169 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 85140 cctccctcgccgccgccgccgccgcctc 85113
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgacgccgcctcct 246 |||||||||||||||||||| Sbjct: 77703 cgccgccgacgccgcctcct 77684
>dbj|AK120341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061B12, full insert sequence Length = 564 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 93 cctccctcgccgccgccgccgccgcctc 66
>dbj|AK119716.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F09, full insert sequence Length = 552 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 cctccctcgccgccgacgccgcctcctc 247 ||||||||||||||| ||||||| |||| Sbjct: 92 cctccctcgccgccgccgccgccgcctc 65
>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence Length = 179735 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gccgccgacgccgcctcctc 247 |||||||||||||||||||| Sbjct: 163557 gccgccgacgccgcctcctc 163538
>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19, complete sequence Length = 185640 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tgaccacgtctgcgacgagaactt 281 |||||||||||| ||||||||||| Sbjct: 57542 tgaccacgtctgtgacgagaactt 57519
>gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, partial cds Length = 439 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 27 tgctgttggctatggcactgagaacggcaaggacta 62 ||||||||| || ||||| ||||| ||||||||||| Sbjct: 404 tgctgttgggtacggcacagagaatggcaaggacta 439
>emb|AL442111.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E11, complete sequence Length = 88090 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcc 242 |||||||||||||||||||| Sbjct: 57833 ccctcgccgccgacgccgcc 57852
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccctcgccgccgacgccgcc 242 |||||||||||||||||||| Sbjct: 11576 ccctcgccgccgacgccgcc 11595
>gb|U41902.1|PMU41902 Pseudosuga menziesii cysteine protease pseudotzain (PM33cysP) mRNA, complete cds Length = 1882 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 366 tgccacctgctgcaaggatcattccagctgctgccc 401 ||||||||||||| | ||||| | |||||||||||| Sbjct: 1362 tgccacctgctgcgacgatcactacagctgctgccc 1397
>gb|AF022734.1|AF022734 Oryza sativa zinc inducible protein mRNA, complete cds Length = 801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gacacctccctcgccgccga 235 |||||||||||||||||||| Sbjct: 294 gacacctccctcgccgccga 275
>emb|AJ812010.1| Aspergillus niger gene for putative peptidase, exon 1 Length = 2960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 agcttttctccctcctgcac 587 |||||||||||||||||||| Sbjct: 932 agcttttctccctcctgcac 951
>gb|M60156.1|HUMGOAQ01 Human guanine nucleotide-binding regulatory protein (Go-alpha) gene, exons 1 and 2 Length = 1976 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 tccctcgccgccgacgccgcctcctcca 249 |||| |||||||| |||||||||||||| Sbjct: 1067 tcccgcgccgccgccgccgcctcctcca 1094
>dbj|AB063035.1| Macaca fascicularis brain cDNA clone:QmoA-11702, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccctgcaggcagcacctgct 307 |||||||||||||||||||| Sbjct: 727 ccctgcaggcagcacctgct 708 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,860,729 Number of Sequences: 3902068 Number of extensions: 4860729 Number of successful extensions: 107880 Number of sequences better than 10.0: 221 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 105913 Number of HSP's gapped (non-prelim): 1958 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)