ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags10b13 |
|---|---|
| Clone Library Name | barley_pub |
>ERG3_LEPMC (Q8J207) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 356 Score = 35.4 bits (80), Expect = 0.15 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLK 177 H++HH F NY F +D + + K +DEL++ LK Sbjct: 280 HTMHHLYFNYNYGQFTTLWDRLGGSYRKPNDELFKRELK 318
>ERG3_YEAST (P32353) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 365 Score = 34.7 bits (78), Expect = 0.26 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLKGTEETPD 198 H++HH F NY F +D + + + D L++ L+ +ET D Sbjct: 288 HTVHHLYFNYNYGQFTTLWDRLGGSYRRPDDSLFDPKLRDAKETWD 333
>ERG3_CANAL (O93875) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 386 Score = 33.1 bits (74), Expect = 0.76 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLKGTEE 189 H++HH F NY F +D + ++ + D L+ +K EE Sbjct: 314 HTVHHLYFNYNYGQFTTLWDRLGNSYRRPDDSLFVKDVKAEEE 356
>SYA_THEAC (Q9HJW4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 871 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +1 Query: 493 LDADVRGVKVLSLGLLNQEKQLNGNGELFRQKYPKLGLRIVD-GSGL--ATW 639 L+ VRG++V +L ++ ++ NG E+ +Y K+ +RIVD G GL TW Sbjct: 202 LEVFVRGLEVATLVFMDMKEDPNGPYEIDGIRYSKMDMRIVDTGYGLERLTW 253
>HIS5_CYAME (Q85FY4) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 206 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%) Frame = +1 Query: 157 LYENSLKGTEETPDLVHLTHMTNLQSAYHLRVGFASIASKPSD--NSEWYMWTLWPLAWL 330 L+E S +G EE V+ + L +G+ + + S+ NSEW W WP AW Sbjct: 86 LFETSEEGKEEGLG-VYKEQVKRLPVKVIPHMGWNRLECQNSECQNSEWVNWKAWPNAWA 144 Query: 331 SMVVAWIYGSSAFVVERIKLKKLKM 405 V ++ +S+ +K++M Sbjct: 145 YFVHSYGVMASSQACATTTYEKIQM 169
>ERG3_ASHGO (Q754B9) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 351 Score = 31.6 bits (70), Expect = 2.2 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLK 177 H++HH F NY F +D + + + EL++++LK Sbjct: 282 HTVHHLYFNYNYGQFTTLWDRLGGSYREPDHELFDSNLK 320
>ERG3_CANGA (P50860) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 364 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLK 177 H++HH F NY F +D + + + D L++ LK Sbjct: 289 HTVHHLYFNYNYGQFTTLWDRLGGSYRRPEDSLFDPKLK 327
>ERG32_SCHPO (O13666) Probable C-5 sterol desaturase 2 (EC 1.3.3.-)| (Sterol-C5-desaturase 2) (Ergosterol delta 5,6 desaturase 2) Length = 329 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLK 177 H+ HH F NY F +D + S+ + EL++ L+ Sbjct: 258 HAAHHMYFNYNYGQFFTLFDRLCSSYRQPDQELFDAELR 296
>ERG3_CANDU (Q8NJ57) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)| (Ergosterol delta 5,6 desaturase) Length = 386 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYENSLKGTEE 189 H++HH F NY F +D + ++ + D L+ K EE Sbjct: 314 HTVHHLYFNYNYGQFTTLWDRLGNSYRRPDDSLFVKDQKKEEE 356
>SC5D_TOBAC (Q9ZT29) Delta-7-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5| sterol desaturase) (Delta7-sterol-C5-desaturase) Length = 271 Score = 30.8 bits (68), Expect = 3.7 Identities = 13/48 (27%), Positives = 26/48 (54%) Frame = +1 Query: 13 GQVFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYSTMDKASDE 156 G+VFP + +H++HH +R NY + + D+++ T+ +E Sbjct: 224 GKVFPVMG-----AGYHTIHHRTYRHNYGHYTIWMDWMFGTLRDPVEE 266
>TFR1_CRIGR (Q07891) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)| Length = 757 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 46 YTPSFHSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYEN 168 YTP F S +HTQF + S +P + + KA+++L++N Sbjct: 306 YTPGFPSFNHTQFPPSQSSGLPSIP-VQTISRKAAEKLFQN 345
>SYA_THEVO (Q97AH7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Frame = +1 Query: 493 LDADVRGVKVLSLGLLNQEKQLNGNGELFRQKYPKLGLRIVD-GSGL--ATW 639 L+ VRG++V +L ++ ++ G E+ +Y K+ ++IVD G GL TW Sbjct: 202 LEVFVRGLEVATLVFMDMKEDQEGEVEIEGTRYTKMDMQIVDTGYGLERLTW 253
>SYA_PICTO (Q6L1Z4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 870 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +1 Query: 493 LDADVRGVKVLSLGLLNQEKQLNGNGELFRQKYPKLGLRIVD-GSGL 630 L+ V G++V +L ++ ++ NG+ EL +Y ++ LR+VD G GL Sbjct: 199 LEVFVMGLEVATLVFMDLKEDKNGDIELEGTRYSRMPLRVVDTGYGL 245
>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) (Adipocyte determination- and differentiation-dependent factor 1) (ADD1) (Fragment) Length = 1024 Score = 30.0 bits (66), Expect = 6.4 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +1 Query: 232 SAYHLRVGFASIASKPSDNSEWYMWTLWPLAWLS 333 S H G + + ++ D S W W L PL WL+ Sbjct: 484 SGVHRSSGRSMLEAESRDGSNWTQWLLPPLVWLA 517
>FIBG_XENLA (P17634) Fibrinogen gamma chain precursor| Length = 438 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/70 (22%), Positives = 31/70 (44%) Frame = +1 Query: 127 YSTMDKASDELYENSLKGTEETPDLVHLTHMTNLQSAYHLRVGFASIASKPSDNSEWYMW 306 +ST DK +D+ ++ + + + ++ H +L Y+ ++ S PS +W Sbjct: 335 FSTFDKDNDK-FDGNCAEQDGSGWWMNRCHAAHLNGKYYQGGTYSEADSGPSGYDNGIIW 393 Query: 307 TLWPLAWLSM 336 W W SM Sbjct: 394 ATWRRRWYSM 403
>CH25H_PIG (Q4G1G8) Cholesterol 25-hydroxylase (EC 1.14.99.38) (Cholesterol| 25-monooxygenase) Length = 270 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 61 HSLHHTQFRTNYSLFMPFYDYIYSTMDKA 147 H LHH+QF N++ + +D I T+ A Sbjct: 239 HDLHHSQFNCNFAPYFTHWDKILGTLRSA 267
>TFR1_CANFA (Q9GLD3) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)| Length = 770 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 46 YTPSFHSLHHTQFRTNYSLFMPFYDYIYSTMDKASDELYEN 168 YTP F S +HTQF + S +P + + A+++L+EN Sbjct: 319 YTPGFPSFNHTQFPPSQSSGLPSIP-VQTISRAAAEKLFEN 358
>SYLC_MOUSE (Q8BMJ2) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)| (Leucine--tRNA ligase) (LeuRS) Length = 1178 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +1 Query: 106 MPFYDYIYSTMDKASDELYENSLKGTEETPDLVHLTHMTNLQSAYHLRVGFASIA 270 MPF I M+K + + L+ E+ + ++ ++TN H+ V FAS A Sbjct: 992 MPFVAMIKENMEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIEVKFASEA 1046
>AMOS_DROME (Q9Y0A7) Basic helix-loop-helix transcription factor amos (Reduced| olfactory organs protein) (Rough eye protein) (Absent MD neurons and olfactory sensilla protein) (Amos protein) Length = 198 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 115 YDYIYSTMDKASDELYENSLKGTEETPDLVHLTHMTNL--QSAYHLR 249 Y +ST D SD SL+ +TP ++ L HM N Q +HL+ Sbjct: 37 YQQEFSTSDSQSDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQ 83
>SC6A8_RAT (P28570) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (CHOT1) (Solute carrier family 6 member 8) Length = 635 Score = 29.6 bits (65), Expect = 8.3 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 310 LWPLAWLSMVVAWIYGSSAFV 372 LW W +VVAW+YG+ F+ Sbjct: 484 LWQAFWECVVVAWVYGADRFM 504
>SC6A8_MOUSE (Q8VBW1) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 640 Score = 29.6 bits (65), Expect = 8.3 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 310 LWPLAWLSMVVAWIYGSSAFV 372 LW W +VVAW+YG+ F+ Sbjct: 489 LWQAFWECVVVAWVYGADRFM 509
>SC6A8_HUMAN (P48029) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 635 Score = 29.6 bits (65), Expect = 8.3 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 310 LWPLAWLSMVVAWIYGSSAFV 372 LW W +VVAW+YG+ F+ Sbjct: 484 LWQAFWECVVVAWVYGADRFM 504
>SC6A8_BOVIN (O18875) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 635 Score = 29.6 bits (65), Expect = 8.3 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 310 LWPLAWLSMVVAWIYGSSAFV 372 LW W +VVAW+YG+ F+ Sbjct: 484 LWQAFWECVVVAWVYGADRFM 504 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,633,982 Number of Sequences: 219361 Number of extensions: 1933423 Number of successful extensions: 5054 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4888 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5052 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
