ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags10b04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L01, full insert sequence Length = 3231 Score = 682 bits (344), Expect = 0.0 Identities = 504/556 (90%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatgcaaagac 74 ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1193 gcaaacatgtcaccag-aatatggtgcaactatgggtttcttcccagttgatggaaagac 1251 Query: 75 attggactacctgaagctaactggcagaagcgatgaaactgtggccatgatagagactta 134 |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1252 attggactacttgaagctaactggcagaagtgatgacactgtggccatgatagagtctta 1311 Query: 135 cctgcgcgccaataatatgttcgtcgactacaagcaggttcaagctgaaagagtgtattc 194 |||||| |||||||| ||||||||||||||||| ||| | |||||||||||||||| || Sbjct: 1312 cctgcgtgccaataagatgttcgtcgactacaaccagcctgaagctgaaagagtgtactc 1371 Query: 195 atcttatcttgaacttgacttggatgaggtggaaccatgtctgtctggaccaaaacggcc 254 ||||||||| |||||| ||||||| ||||| || ||||| ||||||||||||||||||| Sbjct: 1372 atcttatctggaacttaacttggaggaggtagagccatgcttgtctggaccaaaacggcc 1431 Query: 255 tcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctggacaacaa 314 |||||| ||||||| |||||||||||||| ||||||||||| |||||| |||| || | Sbjct: 1432 tcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttggataatga 1491 Query: 315 agtagggttcaagggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttc 374 ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 1492 tgtaggcttcaagggttttgctgtccccaaagaatcacagggtaaagttgctgagttctc 1551 Query: 375 gttccgtgggacgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccag 434 |||| |||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 1552 tttccatgggacaccagcaaagctaaagcatggtgatgttgtaattgctgctataaccag 1611 Query: 435 ttgcaccaacacatcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggc 494 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1612 ttgcaccaacacatcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggc 1671 Query: 495 ttgtgacctaggcctggaggtgaaaccatggattaagacaagccttgcgccaggttctgg 554 |||||| ||||||| ||||| || ||||||||||||||||| ||||| || |||||||| Sbjct: 1672 ttgtgaattaggccttgaggtcaagccatggattaagacaagtcttgcacctggttctgg 1731 Query: 555 tgttgtgaagaagtac 570 ||||||||||||||| Sbjct: 1732 agttgtgaagaagtac 1747
>gb|AY104403.1| Zea mays PCO068697 mRNA sequence Length = 2273 Score = 529 bits (267), Expect = e-147 Identities = 474/543 (87%) Strand = Plus / Plus Query: 32 aatatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagc 91 ||||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||| Sbjct: 197 aatatggcgcaactatgggtttcttcccagttgatggaaagacgctggactatttgaagc 256 Query: 92 taactggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataata 151 | |||||| |||| ||||| || ||||||||| | ||| | |||||||| || ||||| | Sbjct: 257 ttactggccgaagtgatgatacagtggccatggttgagtcctacctgcgtgcgaataaga 316 Query: 152 tgttcgtcgactacaagcaggttcaagctgaaagagtgtattcatcttatcttgaacttg 211 ||||||| || ||| |||| | ||||||||||||| ||||| |||||||| ||||| Sbjct: 317 tgttcgttgatcacagccaggctgaagctgaaagagtatattcttcttatctagaactga 376 Query: 212 acttggatgaggtggaaccatgtctgtctggaccaaaacggcctcatgatagagtgacat 271 || |||| ||||| ||||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 377 acctggaagaggtagaaccatgtctatcgggaccaaaacggcctcacgatcgagtgacat 436 Query: 272 tgaagaacatgaagtcagattggctttcttgcctggacaacaaagtagggttcaagggtt 331 ||||||| |||||||| ||||||||||||||| |||| | | | ||||| |||||||||| Sbjct: 437 tgaagaatatgaagtctgattggctttcttgcttggatagcgatgtaggattcaagggtt 496 Query: 332 ttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtgggacgccag 391 ||||||||||||| || |||||||| |||||||| || |||| ||||| ||||| || | Sbjct: 497 ttgctgtccccaaagagtcacaaggcaaagttgcagaatttttgttccacgggactcctg 556 Query: 392 caaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaa 451 ||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||| Sbjct: 557 caaagataaagcatggtgatgttgtaattgcagcaataaccagttgcacaaacacatcaa 616 Query: 452 atcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctgg 511 ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 617 atcctaatgtaatgctgggagctgctttggttgccaagaaggcttgtgagttaggcctgg 676 Query: 512 aggtgaaaccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtact 571 |||| || |||||||||||||| |||||||| || |||||||||||||||||| |||||| Sbjct: 677 aggtaaagccatggattaagacgagccttgcacctggttctggtgttgtgaagcagtact 736 Query: 572 tgg 574 ||| Sbjct: 737 tgg 739
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 272 bits (137), Expect = 1e-69 Identities = 179/193 (92%) Strand = Plus / Minus Query: 326 agggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtggga 385 ||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||||| Sbjct: 48768 agggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatggga 48709 Query: 386 cgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaaca 445 | ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 48708 caccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaaca 48649 Query: 446 catcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctag 505 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 48648 catcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattag 48589 Query: 506 gcctggaggtgaa 518 |||| |||||||| Sbjct: 48588 gccttgaggtgaa 48576 Score = 147 bits (74), Expect = 5e-32 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatgcaaagac 74 ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 49618 gcaaacatgtcaccag-aatatggtgcaactatgggtttcttcccagttgatggaaagac 49560 Query: 75 attggactacctgaagctaactggcagaagcgatgaaactgt 116 |||||||||| ||||||||||||||||||| ||||| ||||| Sbjct: 49559 attggactacttgaagctaactggcagaagtgatgacactgt 49518 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 176 aagctgaaagagtgtattcatcttatcttgaacttgacttggatgaggtggaaccatgtc 235 |||||||||||||||| ||||||||||| |||||| ||||||| ||||| || ||||| Sbjct: 49301 aagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgct 49242 Query: 236 tgtctggaccaaaacgg 252 ||||||||||||||||| Sbjct: 49241 tgtctggaccaaaacgg 49225 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 115 gtggccatgatagagacttacctgcgcgccaataatatgttcgtcgactacaagcaggt 173 ||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 49443 gtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccaggt 49385 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 520 ccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||| Sbjct: 48302 ccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttgg 48248 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 251 ggcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctgga 308 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||| |||| Sbjct: 49148 ggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttgga 49091
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 272 bits (137), Expect = 1e-69 Identities = 179/193 (92%) Strand = Plus / Minus Query: 326 agggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtggga 385 ||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||||| Sbjct: 2010007 agggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatggga 2009948 Query: 386 cgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaaca 445 | ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2009947 caccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaaca 2009888 Query: 446 catcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctag 505 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 2009887 catcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattag 2009828 Query: 506 gcctggaggtgaa 518 |||| |||||||| Sbjct: 2009827 gccttgaggtgaa 2009815 Score = 147 bits (74), Expect = 5e-32 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatgcaaagac 74 ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2010857 gcaaacatgtcaccag-aatatggtgcaactatgggtttcttcccagttgatggaaagac 2010799 Query: 75 attggactacctgaagctaactggcagaagcgatgaaactgt 116 |||||||||| ||||||||||||||||||| ||||| ||||| Sbjct: 2010798 attggactacttgaagctaactggcagaagtgatgacactgt 2010757 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 176 aagctgaaagagtgtattcatcttatcttgaacttgacttggatgaggtggaaccatgtc 235 |||||||||||||||| ||||||||||| |||||| ||||||| ||||| || ||||| Sbjct: 2010540 aagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgct 2010481 Query: 236 tgtctggaccaaaacgg 252 ||||||||||||||||| Sbjct: 2010480 tgtctggaccaaaacgg 2010464 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 115 gtggccatgatagagacttacctgcgcgccaataatatgttcgtcgactacaagcaggt 173 ||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2010682 gtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccaggt 2010624 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 520 ccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||| Sbjct: 2009541 ccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttgg 2009487 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 251 ggcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctgga 308 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||| |||| Sbjct: 2010387 ggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttgga 2010330
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 272 bits (137), Expect = 1e-69 Identities = 179/193 (92%) Strand = Plus / Minus Query: 326 agggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtggga 385 ||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||||| Sbjct: 2010019 agggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatggga 2009960 Query: 386 cgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaaca 445 | ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2009959 caccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaaca 2009900 Query: 446 catcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctag 505 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 2009899 catcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattag 2009840 Query: 506 gcctggaggtgaa 518 |||| |||||||| Sbjct: 2009839 gccttgaggtgaa 2009827 Score = 147 bits (74), Expect = 5e-32 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatgcaaagac 74 ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2010869 gcaaacatgtcaccag-aatatggtgcaactatgggtttcttcccagttgatggaaagac 2010811 Query: 75 attggactacctgaagctaactggcagaagcgatgaaactgt 116 |||||||||| ||||||||||||||||||| ||||| ||||| Sbjct: 2010810 attggactacttgaagctaactggcagaagtgatgacactgt 2010769 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 176 aagctgaaagagtgtattcatcttatcttgaacttgacttggatgaggtggaaccatgtc 235 |||||||||||||||| ||||||||||| |||||| ||||||| ||||| || ||||| Sbjct: 2010552 aagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgct 2010493 Query: 236 tgtctggaccaaaacgg 252 ||||||||||||||||| Sbjct: 2010492 tgtctggaccaaaacgg 2010476 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 115 gtggccatgatagagacttacctgcgcgccaataatatgttcgtcgactacaagcaggt 173 ||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2010694 gtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccaggt 2010636 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 520 ccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||| Sbjct: 2009553 ccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttgg 2009499 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 251 ggcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctgga 308 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||| |||| Sbjct: 2010399 ggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttgga 2010342
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 326 agggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtggga 385 ||||||||||||||||||| |||||||| || |||||||| || |||||||||| ||| | Sbjct: 92724 agggttttgctgtccccaaagaatcacagggcaaagttgcagaattttcgttccatggaa 92783 Query: 386 cgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaaca 445 | || ||||||||||| |||||||||||||||||||| || || ||||||||||| |||| Sbjct: 92784 ctcctgcaaagataaaacatggtgatgttgtaattgcagcaataaccagttgcacaaaca 92843 Query: 446 catcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctag 505 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 92844 catcaaatcctaatgtaatgctgggagctgctttggttgccaagaaggcttgtgagttag 92903 Query: 506 gcctggaggt 515 |||||||||| Sbjct: 92904 gcctggaggt 92913 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 32 aatatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagc 91 |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 91756 aatatggtgcaactatgggtttcttcccagttgatgcaaagacactggactatttgaagc 91815 Query: 92 taactggcagaagcgatga 110 | |||||| |||| ||||| Sbjct: 91816 ttactggccgaagtgatga 91834 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 251 ggcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctggaca 310 ||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||| Sbjct: 92222 ggcctcatgatcgagtgacattgaagaatatgaagtctgattggctttcttgcttggaca 92281 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 168 gcaggttcaagctgaaagagtgtattcatcttatcttgaacttgacttggatgaggtgga 227 ||||||| ||||||||||||| ||||| || ||||| |||||| || |||| ||||| || Sbjct: 92052 gcaggttgaagctgaaagagtatattcttcctatctagaacttaacctggaagaggtaga 92111 Query: 228 accatgtctgtctggaccaaaacgg 252 ||||||||| || |||||||||||| Sbjct: 92112 accatgtctatcgggaccaaaacgg 92136 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 520 ccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 |||||||||||||| || ||||| || ||||| |||||||||||||||||||||| Sbjct: 93145 ccatggattaagacgagtcttgcacctggttccggtgttgtgaagaagtacttgg 93199
>gb|AY050485.1| Prunus avium putative aconitase mRNA, complete cds Length = 3146 Score = 115 bits (58), Expect = 2e-22 Identities = 172/210 (81%) Strand = Plus / Plus Query: 325 aagggttttgctgtccccaaggaatcacaaggtaaagttgctgagttttcgttccgtggg 384 |||||||||||||| || |||||||| ||| |||||||| ||||| | || | || Sbjct: 1340 aagggttttgctgtgccgaaggaatctcaaaataaagttgtagagttcgcatttcacgga 1399 Query: 385 acgccagcaaagataaagcatggtgatgttgtaattgcggctatcaccagttgcaccaac 444 || ||||| || ||| |||||| ||||| || || || ||||||||||||||||| ||| Sbjct: 1400 accccagctcagctaaggcatggggatgtagttatagcagctatcaccagttgcacaaac 1459 Query: 445 acatcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggcttgtgaccta 504 || |||||||||| ||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 1460 acctcaaatcctagtgtaatgcttggagctgctttggttgcaaagaaagcttgtgaatta 1519 Query: 505 ggcctggaggtgaaaccatggattaagaca 534 || ||||||| || ||||||||||||||| Sbjct: 1520 ggattggaggtcaagccatggattaagaca 1549
>ref|NM_119749.3| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT4G35830 mRNA, complete cds Length = 3214 Score = 103 bits (52), Expect = 6e-19 Identities = 142/172 (82%) Strand = Plus / Plus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 1396 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 1455 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaacca 522 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| || ||| Sbjct: 1456 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggttaagcca 1515 Query: 523 tggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||| || || || ||||| ||||| ||||| ||||| | |||||||||| Sbjct: 1516 tggatcaaaactagtcttgctccaggctctggagttgtaacaaagtacttgg 1567 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 tggctttcttgcctggacaacaaagtagggttcaagggttttgctgt 338 |||| ||||||| ||||||| | |||||| ||||||||||| ||||| Sbjct: 1285 tggcattcttgcttggacaatagagtaggattcaagggtttcgctgt 1331
>emb|X82839.1|ATACON A.thaliana mRNA for aconitase (ZAPII) Length = 3209 Score = 103 bits (52), Expect = 6e-19 Identities = 142/172 (82%) Strand = Plus / Plus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 1355 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 1414 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaacca 522 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| || ||| Sbjct: 1415 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggttaagcca 1474 Query: 523 tggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||| || || || ||||| ||||| ||||| ||||| | |||||||||| Sbjct: 1475 tggatcaaaactagtcttgctccaggctctggagttgtaacaaagtacttgg 1526 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 tggctttcttgcctggacaacaaagtagggttcaagggttttgctgt 338 |||| ||||||| ||||||| | |||||| ||||||||||| ||||| Sbjct: 1244 tggcattcttgcttggacaatagagtaggattcaagggtttcgctgt 1290
>gb|AY062772.1| Arabidopsis thaliana Unknown protein (At4g35830; F4B14.100) mRNA, complete cds Length = 2908 Score = 103 bits (52), Expect = 6e-19 Identities = 142/172 (82%) Strand = Plus / Plus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 1323 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 1382 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaacca 522 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| || ||| Sbjct: 1383 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggttaagcca 1442 Query: 523 tggattaagacaagccttgcgccaggttctggtgttgtgaagaagtacttgg 574 ||||| || || || ||||| ||||| ||||| ||||| | |||||||||| Sbjct: 1443 tggatcaaaactagtcttgctccaggctctggagttgtaacaaagtacttgg 1494 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 tggctttcttgcctggacaacaaagtagggttcaagggttttgctgt 338 |||| ||||||| ||||||| | |||||| ||||||||||| ||||| Sbjct: 1212 tggcattcttgcttggacaatagagtaggattcaagggtttcgctgt 1258
>gb|AY104770.1| Zea mays PCO074909 mRNA sequence Length = 3628 Score = 103 bits (52), Expect = 6e-19 Identities = 211/264 (79%) Strand = Plus / Plus Query: 72 gacattggactacctgaagctaactggcagaagcgatgaaactgtggccatgatagagac 131 ||||||||| ||||| || || || ||| | || |||||||||||| | ||||| || | Sbjct: 1292 gacattggattaccttaaactgacaggccgcagtgatgaaactgtgtcaatgattgaagc 1351 Query: 132 ttacctgcgcgccaataatatgttcgtcgactacaagcaggttcaagctgaaagagtgta 191 |||||||| |||||||| ||||| || |||||||| || || | | || ||| | || Sbjct: 1352 atacctgcgagccaataaaatgtttgtggactacaatgagcctccaacagagagaatata 1411 Query: 192 ttcatcttatcttgaacttgacttggatgaggtggaaccatgtctgtctggaccaaaacg 251 |||||||||||||| || || | ||||||||||| || | ||||||| ||||| | Sbjct: 1412 ctcatcttatcttgagctgaaccttgatgaggtggagcctagcatgtctggcccaaagag 1471 Query: 252 gcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctggacaa 311 |||||||||| | || | |||||| | ||||| |||||||||| | ||||||||||||| Sbjct: 1472 gcctcatgatcgtgtccctttgaaggaaatgaaatcagattggcatgcttgcctggacaa 1531 Query: 312 caaagtagggttcaagggttttgc 335 |||||| ||||||||||||||||| Sbjct: 1532 caaagttgggttcaagggttttgc 1555 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 511 gaggtgaaaccatggattaagacaagccttgcgccaggttctggtgttgtgaagaagtac 570 ||||| ||||||||| | |||||||||||||| || || || || ||||| | ||||||| Sbjct: 1731 gaggttaaaccatgggtgaagacaagccttgcccctggatcaggagttgtcacgaagtac 1790 Query: 571 ttg 573 ||| Sbjct: 1791 ttg 1793
>gb|AY250115.1| Lycopersicon pennellii aconitase mRNA, partial cds Length = 2694 Score = 93.7 bits (47), Expect = 6e-16 Identities = 263/335 (78%) Strand = Plus / Plus Query: 226 gaaccatgtctgtctggaccaaaacggcctcatgatagagtgacattgaagaacatgaag 285 |||||||||||||| || ||||| | |||||||| | ||| | ||||| | |||||| Sbjct: 1111 gaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaag 1170 Query: 286 tcagattggctttcttgcctggacaacaaagtagggttcaagggttttgctgtccccaag 345 || || |||| | ||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 1171 tctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtcccaaaa 1230 Query: 346 gaatcacaaggtaaagttgctgagttttcgttccgtgggacgccagcaaagataaagcat 405 || |||| |||||| || |||||||| |||| |||| || ||| || | || ||| Sbjct: 1231 gaggtgcaagataaagtggccgagttttccttccatgggcaacctgcagagctcaaacat 1290 Query: 406 ggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgtaatg 465 || |||||| ||||| |||||||| |||||||| || ||||| ||||| | ||| ||| Sbjct: 1291 ggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatg 1350 Query: 466 ctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatgg 525 || ||||| || |||||||||||||||| | ||| || || || | || || |||||| Sbjct: 1351 ctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgg 1410 Query: 526 attaagacaagccttgcgccaggttctggtgttgt 560 |||| || |||||||| ||||| ||||||||||| Sbjct: 1411 gttaaaactagccttgccccaggctctggtgttgt 1445 Score = 50.1 bits (25), Expect = 0.008 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttccc 59 ||||||||||| || | ||||||||||||| |||||||||||||| Sbjct: 901 gcaaacatggctcctg-aatatggtgcaacaatgggtttcttccc 944
>gb|BT024088.1| Zea mays clone EL01N0553G09 mRNA sequence Length = 1988 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 193 tcatcttatcttgaacttgacttggatgaggtggaaccatgtctgtctggaccaaaacgg 252 |||||||||||||| || || | ||||||||||| || | ||||||| ||||| || Sbjct: 24 tcatcttatcttgagctgaaccttgatgaggtggagcctagcatgtctggcccaaagagg 83 Query: 253 cctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctggacaac 312 ||||||||| | || | |||||| | ||||| |||||||||| | |||||||||||||| Sbjct: 84 cctcatgatcgtgtccctttgaaggaaatgaaatcagattggcatgcttgcctggacaac 143 Query: 313 aaagtagggttcaagggttttgc 335 ||||| ||||||||||||||||| Sbjct: 144 aaagttgggttcaagggttttgc 166
>emb|CR932965.2| Medicago truncatula chromosome 5 clone mth2-47e6, COMPLETE SEQUENCE Length = 96647 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 402 gcatggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgt 461 |||||| |||||||| || || |||||||||||||| || ||||| |||||||||| ||| Sbjct: 55121 gcatggggatgttgttatagctgctatcaccagttgtacaaacacctcaaatcctagtgt 55062 Query: 462 aatgctgggagctgcgttggttgc 485 |||||| |||||||| |||||||| Sbjct: 55061 aatgcttggagctgcattggttgc 55038 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 512 aggtgaaaccatggattaagacaagccttgcgccaggttctggtgt 557 ||||||| |||||||| || ||||| ||||| |||||||||||||| Sbjct: 54658 aggtgaagccatggatcaaaacaagtcttgctccaggttctggtgt 54613
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 459 tgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaa 518 |||||||||||||||||| | |||||||||| |||||| || ||||||| ||||| || Sbjct: 15381475 tgtaatgctgggagctgctatagttgccaaaatggcttgcgaattaggccttgaggtcaa 15381534 Query: 519 accatggattaagacaagccttgcgccaggttctggtgttgtgaagaa 566 ||||||||||||||||| || | ||||||||||| |||||||||| Sbjct: 15381535 gccatggattaagacaagtctcacaccaggttctggacttgtgaagaa 15381582
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 459 tgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaa 518 |||||||||||||||||| | |||||||||| |||||| || ||||||| ||||| || Sbjct: 59016 tgtaatgctgggagctgctatagttgccaaaatggcttgcgaattaggccttgaggtcaa 59075 Query: 519 accatggattaagacaagccttgcgccaggttctggtgttgtgaagaa 566 ||||||||||||||||| || | ||||||||||| |||||||||| Sbjct: 59076 gccatggattaagacaagtctcacaccaggttctggacttgtgaagaa 59123
>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1039D07 Length = 135301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 459 tgtaatgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaa 518 |||||||||||||||||| | |||||||||| |||||| || ||||||| ||||| || Sbjct: 122834 tgtaatgctgggagctgctatagttgccaaaatggcttgcgaattaggccttgaggtcaa 122893 Query: 519 accatggattaagacaagccttgcgccaggttctggtgttgtgaagaa 566 ||||||||||||||||| || | ||||||||||| |||||||||| Sbjct: 122894 gccatggattaagacaagtctcacaccaggttctggacttgtgaagaa 122941
>emb|X97012.1|STRNAAAH S.tuberosum mRNA for aconitase/aconitate hydratase Length = 2120 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 411 tgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgtaatgctggg 470 |||||| ||||| |||||||| |||||||| || ||||| ||||| | ||| ||||| || Sbjct: 450 tgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctagg 509 Query: 471 agctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatggattaa 530 ||| || |||||||||||||||| | ||| || || || | || || |||||| |||| Sbjct: 510 agcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaa 569 Query: 531 gacaagccttgcgccaggttctggtgttgt 560 ||||||||||| ||||| ||||||||||| Sbjct: 570 aacaagccttgccccaggctctggtgttgt 599 Score = 50.1 bits (25), Expect = 0.008 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttccc 59 ||||||||||| || | ||||||||||||| |||||||||||||| Sbjct: 55 gcaaacatggctcctg-aatatggtgcaacaatgggtttcttccc 98
>gb|AF073507.1|AF073507 Citrus limon aconitase-iron regulated protein 1 (IRP1) mRNA, complete cds Length = 3401 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 411 tgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgtaatgctggg 470 |||||| ||||| || |||||||| || || ||||||||||| |||| ||| ||||| || Sbjct: 1750 tgttgtcattgcagccatcaccagctgtacaaacacatcaaaccctagtgtcatgcttgg 1809 Query: 471 agctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatggattaa 530 |||| | || || |||||||||||||| ||||| ||||||| || |||||| | || Sbjct: 1810 ggctggtcttgtggctaaaaaggcttgtgaactaggtttggaggttaagccatgggtcaa 1869 Query: 531 gacaagccttgcgccaggttctggtgttgt 560 ||||||||||| ||||| ||||||||||| Sbjct: 1870 aacaagccttgcaccaggctctggtgttgt 1899 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 ttcaagggttttgctgtccccaag 345 ||||||||||||||||| |||||| Sbjct: 1661 ttcaagggttttgctgtacccaag 1684
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 47130 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 47071 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggt 515 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| Sbjct: 47070 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggt 47018
>emb|X82841.1|ATACO A.thaliana Aco gene Length = 6758 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 3953 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 4012 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggt 515 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| Sbjct: 4013 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggt 4065
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 403 catggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgta 462 ||||| |||||||| || || || |||||||||||||| || || ||||| |||| |||| Sbjct: 38934 catggagatgttgttatagcagcaatcaccagttgcacaaatacttcaaaccctagtgta 38875 Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggt 515 ||||| || ||||| || ||||| |||||||| || |||||||| |||||||| Sbjct: 38874 atgcttggcgctgccttagttgcaaaaaaggcctgcgacctaggactggaggt 38822
>gb|AY250116.1| Lycopersicon pennellii aconitase mRNA, partial cds Length = 2694 Score = 77.8 bits (39), Expect = 4e-11 Identities = 261/335 (77%) Strand = Plus / Plus Query: 226 gaaccatgtctgtctggaccaaaacggcctcatgatagagtgacattgaagaacatgaag 285 |||||||||||||| || ||||| | |||||||| | ||| | ||||| | |||||| Sbjct: 1111 gaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaag 1170 Query: 286 tcagattggctttcttgcctggacaacaaagtagggttcaagggttttgctgtccccaag 345 || || |||| | ||||||| || |||||||| || |||||||| |||||||| || || Sbjct: 1171 tctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaa 1230 Query: 346 gaatcacaaggtaaagttgctgagttttcgttccgtgggacgccagcaaagataaagcat 405 || |||| |||||| || ||||||| |||| |||| || ||| || | || ||| Sbjct: 1231 gaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacat 1290 Query: 406 ggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgtaatg 465 || |||||| ||||| |||||||| |||||||| || ||||| ||||| | ||| ||| Sbjct: 1291 ggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatg 1350 Query: 466 ctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatgg 525 || ||||| || |||||||||||||||| | ||| || || || | || || |||||| Sbjct: 1351 ctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgg 1410 Query: 526 attaagacaagccttgcgccaggttctggtgttgt 560 |||| || |||||||| ||||| ||||||||||| Sbjct: 1411 gttaaaactagccttgccccaggctctggtgttgt 1445 Score = 50.1 bits (25), Expect = 0.008 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttccc 59 ||||||||||| || | ||||||||||||| |||||||||||||| Sbjct: 901 gcaaacatggctcctg-aatatggtgcaacaatgggtttcttccc 944
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 13 tcgcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 ||||||||||||| |||| ||||||||||||| || ||||||||||||||||||| Sbjct: 89677 tcgcaaacatggctccag-aatatggtgcaacaataggtttcttcccagttgatg 89730
>ref|NM_118831.2| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT4G26970 mRNA, complete cds Length = 3815 Score = 67.9 bits (34), Expect = 3e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagcta 93 ||||| ||||||||||||||||||||||| ||| ||| |||| ||||||||| | Sbjct: 1369 tatggagcaactatgggtttcttcccagtggatcatgttacactggagtacctgaagttg 1428 Query: 94 actggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataatatg 153 || || |||||||||||||||||| | |||||||| | || ||||||| || |||||| Sbjct: 1429 acaggaagaagcgatgaaactgtgtcaatgatagaatcatatttgcgcgcaaacaatatg 1488 Query: 154 ttcgtcgactacaa 167 || || |||||||| Sbjct: 1489 tttgttgactacaa 1502
>ref|XM_480473.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2697 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 271 ttgaagaacatgaagtcagattggctttcttgcctggacaacaaagtagggttcaagggt 330 |||||| | ||||| || || |||| |||||||||||| |||| ||| || ||||||||| Sbjct: 1156 ttgaaggaaatgaaatctgactggcattcttgcctggataacagagttggtttcaagggt 1215 Query: 331 tttgctgtccccaaggaatcacaaggtaaagttg 364 |||||||| || |||||| ||||| |||||||| Sbjct: 1216 tttgctgtaccaaaggaacaacaagataaagttg 1249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 436 tgcaccaacacatcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggct 495 ||||| |||||||||||||||| ||| ||||| || ||||| | || || || || || Sbjct: 1321 tgcacaaacacatcaaatcctagtgttatgcttggtgctgcccttgtggcaaagaaagcc 1380 Query: 496 tgtgacctaggcctggaggtgaaaccatggattaagacaagccttgcgccaggttctggt 555 ||||| || || || ||||||||||||||| | |||||||||||||| || || ||||| Sbjct: 1381 tgtgaactgggtcttgaggtgaaaccatgggtaaagacaagccttgcccctggatctggg 1440 Query: 556 gttgt 560 ||||| Sbjct: 1441 gttgt 1445
>gb|AF194945.1|AF194945 Nicotiana tabacum cytosolic aconitase (ACO) mRNA, complete cds Length = 3025 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 411 tgttgtaattgcggctatcaccagttgcaccaacacatcaaatcctaatgtaatgctggg 470 |||||| ||||| |||||||| |||||||| || ||||||||||| | ||| ||||| || Sbjct: 1334 tgttgtgattgctgctatcactagttgcactaatacatcaaatcccagtgttatgctagg 1393 Query: 471 agctgcgttggttgccaaaaaggcttgtgacct 503 ||| || | ||||| ||||||||||| ||||| Sbjct: 1394 agcagcccttgttgcaaaaaaggcttgcgacct 1426
>emb|Z99983.1|MAZ99983 Musa acuminata mRNA for putative aconitase (clone pBAN EU8) Length = 823 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 94 actggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataatatg 153 ||||| ||||| ||||| ||||||||||||||||| || ||| | || |||||||| ||| Sbjct: 329 actggaagaagtgatgagactgtggccatgatagaaacatacttacgagccaataaaatg 388 Query: 154 ttcgtcgactacaagcaggttcaagctgaaagagtgtattcatcttat 201 || || ||||||| ||| ||| |||||||||| || ||||||||| Sbjct: 389 tttgttgactacagtcagccacaaactgaaagagtatactcatcttat 436 Score = 60.0 bits (30), Expect = 8e-06 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Plus Query: 403 catggtgatgttgtaattg-cggctatcaccagttgcaccaacacatcaaatcctaatgt 461 |||||||||||||| |||| | || || ||| ||||||| |||||||| ||||||||||| Sbjct: 639 catggtgatgttgtgattggctgcaattaccngttgcacgaacacatccaatcctaatgt 698 Query: 462 aatg-ctgggagctgcgttggttgccaaaaa 491 ||| || ||| |||| |||||| ||||||| Sbjct: 699 tatgccttgganctgctttggttnccaaaaa 729 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttga 65 ||||| |||||||||||||||||||||||||| Sbjct: 269 tatggagcaactatgggtttcttcccagttga 300
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 50/55 (90%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 13 tcgcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 ||||||||||| | |||| ||||||||||||| || ||||||||||||||||||| Sbjct: 1705252 tcgcaaacatgactccag-aatatggtgcaacaataggtttcttcccagttgatg 1705199
>gb|BT000492.1| Arabidopsis thaliana putative aconitase (At4g26970/F10M23_310) mRNA, complete cds Length = 2988 Score = 60.0 bits (30), Expect = 8e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagcta 93 ||||| ||| ||||||||||||||||||| ||| ||| |||| ||||||||| | Sbjct: 1210 tatggagcagctatgggtttcttcccagtggatcatgttacactggagtacctgaagttg 1269 Query: 94 actggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataatatg 153 || || |||||||||||||||||| | |||||||| | || ||||||| || |||||| Sbjct: 1270 acaggaagaagcgatgaaactgtgtcaatgatagaatcatatttgcgcgcaaacaatatg 1329 Query: 154 ttcgtcgactacaa 167 || || |||||||| Sbjct: 1330 tttgttgactacaa 1343
>gb|AY050431.1| Arabidopsis thaliana AT4g26970/F10M23_310 mRNA, complete cds Length = 3291 Score = 60.0 bits (30), Expect = 8e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagcta 93 ||||| ||| ||||||||||||||||||| ||| ||| |||| ||||||||| | Sbjct: 1365 tatggagcagctatgggtttcttcccagtggatcatgttacactggagtacctgaagttg 1424 Query: 94 actggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataatatg 153 || || |||||||||||||||||| | |||||||| | || ||||||| || |||||| Sbjct: 1425 acaggaagaagcgatgaaactgtgtcaatgatagaatcatatttgcgcgcaaacaatatg 1484 Query: 154 ttcgtcgactacaa 167 || || |||||||| Sbjct: 1485 tttgttgactacaa 1498
>emb|X82840.1|CMACON C.melo mRNA for aconitase (UNI-ZAPxR) Length = 2594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 463 atgctgggagctgcgttggttgccaaaaaggcttgtgacctaggcctggaggtgaaacca 522 ||||| |||||||| ||||| || |||||||||||||| || || || ||||| || || Sbjct: 945 atgcttggagctgctttggtggctaaaaaggcttgtgagcttgggctagaggttaagccc 1004 Query: 523 tggattaagaca 534 |||||||||||| Sbjct: 1005 tggattaagaca 1016
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagcta 93 ||||| ||||||||||||||||||||||| ||| ||| |||| ||||||||| | Sbjct: 49097 tatggagcaactatgggtttcttcccagtggatcatgttacactggagtacctgaagttg 49156 Query: 94 actggcagaagcgatgaaactgtg 117 || || |||||||||||||||||| Sbjct: 49157 acaggaagaagcgatgaaactgtg 49180
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttcccagttgatgcaaagacattggactacctgaagcta 93 ||||| ||||||||||||||||||||||| ||| ||| |||| ||||||||| | Sbjct: 93254 tatggagcaactatgggtttcttcccagtggatcatgttacactggagtacctgaagttg 93313 Query: 94 actggcagaagcgatgaaactgtg 117 || || |||||||||||||||||| Sbjct: 93314 acaggaagaagcgatgaaactgtg 93337
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 412 gttgtaattgcggctatcaccagttgcaccaacac 446 ||||| || |||||||||||||||||||||||||| Sbjct: 2111935 gttgtgatcgcggctatcaccagttgcaccaacac 2111969
>gb|AY104037.1| Zea mays PCO139346 mRNA sequence Length = 2256 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 251 ggcctcatgatagagtgacattgaagaacatgaagtcagattggctttcttgcctggaca 310 ||||||||||| | || | |||||| | ||||||||||| |||| | |||||||||||| Sbjct: 185 ggcctcatgatcgtgtccctttgaaggaaatgaagtcagactggcatgcttgcctggaca 244 Query: 311 acaaagtagggttcaaggg 329 || |||| || |||||||| Sbjct: 245 acgaagttggtttcaaggg 263 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 503 taggcctggaggtgaaaccatggattaagacaagcctt 540 ||||||| |||||||| |||||| | |||||||||||| Sbjct: 437 taggccttgaggtgaagccatgggtaaagacaagcctt 474
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 512 aggtgaaaccatggattaagacaagccttgcgccaggttctggtgttgt 560 |||||||||||||| | |||||||||||||| || || ||||| ||||| Sbjct: 5323803 aggtgaaaccatgggtaaagacaagccttgcccctggatctggggttgt 5323755 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 436 tgcaccaacacatcaaatcctaatgtaatgctgggagctgc 476 ||||| |||||||||||||||| ||| ||||| || ||||| Sbjct: 5323966 tgcacaaacacatcaaatcctagtgttatgcttggtgctgc 5323926
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 512 aggtgaaaccatggattaagacaagccttgcgccaggttctggtgttgt 560 |||||||||||||| | |||||||||||||| || || ||||| ||||| Sbjct: 115391 aggtgaaaccatgggtaaagacaagccttgcccctggatctggggttgt 115343 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 436 tgcaccaacacatcaaatcctaatgtaatgctgggagctgc 476 ||||| |||||||||||||||| ||| ||||| || ||||| Sbjct: 115554 tgcacaaacacatcaaatcctagtgttatgcttggtgctgc 115514
>emb|Z93104.1|MAZ93104 M.acuminata mRNA; clone pBAN UU91 Length = 770 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 436 tgcaccaacacatcaaatcctaatgtaatgctgggagctgcgttggttgccaaaaaggct 495 ||||| |||||||||||||| ||||| ||||| || |||| | ||||| || ||||| Sbjct: 91 tgcacaaacacatcaaatcccaatgttatgcttggtgctggtcttgttgcaaagaaggcc 150 Query: 496 tgtgacctaggcctggaggtgaaaccatggattaagacaagccttgcgccaggttctggt 555 ||||| |||| || |||| || || ||||| || || |||||||| ||||||||||| Sbjct: 151 tgtgaattaggtctacaggttaagccttggatcaaaaccagccttgctccaggttctgga 210 Query: 556 gttgt 560 ||||| Sbjct: 211 gttgt 215
>ref|XM_636745.1| Dictyostelium discoideum aconitase (DDB0229908), partial mRNA Length = 2685 Score = 48.1 bits (24), Expect = 0.032 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 16 caaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||| |||||||||| | ||||| ||||||||||||||||| |||| ||||| Sbjct: 896 caaatatggcaccag-agtatggagcaactatgggtttctttccagctgatg 946
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 32 aatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||| ||||||||||||||||||| Sbjct: 1604244 aatatggtgcaacttgtggtttcttcccagttgatg 1604209
>ref|NM_126589.2| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT2G05710 mRNA, complete cds Length = 3493 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 238 tctggaccaaaacggcctcatgatagagtgacattgaagaacatgaagtcagattggctt 297 ||||||||||| ||||| |||||| | || || |||||| | ||||| | || |||| | Sbjct: 1591 tctggaccaaagcggccacatgatcgtgttactttgaaggaaatgaaagctgactggcat 1650 Query: 298 tcttgcctggacaacaaagtagggttcaagggttttgct 336 || || || |||| ||||| |||||||||||||||||| Sbjct: 1651 tcatgtcttgacagtaaagttgggttcaagggttttgct 1689 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 481 gttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatggattaagacaagcctt 540 ||||| || |||||||||||||| || || |||| || || ||||| |||||||| ||| Sbjct: 1834 gttgcaaagaaggcttgtgaccttgggctacaggttaagccttggataaagacaagtctt 1893 Query: 541 gcgccagg 548 || ||||| Sbjct: 1894 gctccagg 1901
>gb|BT008809.1| Arabidopsis thaliana At2g05710 gene, complete cds Length = 2973 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 238 tctggaccaaaacggcctcatgatagagtgacattgaagaacatgaagtcagattggctt 297 ||||||||||| ||||| |||||| | || || |||||| | ||||| | || |||| | Sbjct: 1399 tctggaccaaagcggccacatgatcgtgttactttgaaggaaatgaaagctgactggcat 1458 Query: 298 tcttgcctggacaacaaagtagggttcaagggttttgct 336 || || || |||| ||||| |||||||||||||||||| Sbjct: 1459 tcatgtcttgacagtaaagttgggttcaagggttttgct 1497 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 481 gttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatggattaagacaagcctt 540 ||||| || |||||||||||||| || || |||| || || ||||| |||||||| ||| Sbjct: 1642 gttgcaaagaaggcttgtgaccttgggctacaggttaagccttggataaagacaagtctt 1701 Query: 541 gcgccagg 548 || ||||| Sbjct: 1702 gctccagg 1709
>gb|AY136414.1| Arabidopsis thaliana cytoplasmic aconitate hydratase (At2g05710) mRNA, complete cds Length = 3372 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 238 tctggaccaaaacggcctcatgatagagtgacattgaagaacatgaagtcagattggctt 297 ||||||||||| ||||| |||||| | || || |||||| | ||||| | || |||| | Sbjct: 1565 tctggaccaaagcggccacatgatcgtgttactttgaaggaaatgaaagctgactggcat 1624 Query: 298 tcttgcctggacaacaaagtagggttcaagggttttgct 336 || || || |||| ||||| |||||||||||||||||| Sbjct: 1625 tcatgtcttgacagtaaagttgggttcaagggttttgct 1663 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 481 gttgccaaaaaggcttgtgacctaggcctggaggtgaaaccatggattaagacaagcctt 540 ||||| || |||||||||||||| || || |||| || || ||||| |||||||| ||| Sbjct: 1808 gttgcaaagaaggcttgtgaccttgggctacaggttaagccttggataaagacaagtctt 1867 Query: 541 gcgccagg 548 || ||||| Sbjct: 1868 gctccagg 1875
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 46.1 bits (23), Expect = 0.13 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 13 tcgcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1315833 tcgcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1315886
>dbj|D29629.1|CUCACO Cucurbita cv. Kurokawa Amakuri mRNA for aconitase, complete cds Length = 3145 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 34 tatggtgcaactatgggtttcttccc 59 ||||||||||||||||| |||||||| Sbjct: 1158 tatggtgcaactatgggcttcttccc 1183 Score = 42.1 bits (21), Expect = 2.0 Identities = 60/73 (82%) Strand = Plus / Plus Query: 92 taactggcagaagcgatgaaactgtggccatgatagagacttacctgcgcgccaataata 151 ||||||| ||||| |||||||||||| | ||||| || ||||||| || || ||||| | Sbjct: 1216 taactggaagaagtgatgaaactgtgtcgatgattgaagcttacctccgggcaaataaaa 1275 Query: 152 tgttcgtcgacta 164 |||| || ||||| Sbjct: 1276 tgtttgttgacta 1288
>gb|AY359940.1| Trachelomonas strain T603 large subunit ribosomal RNA gene, partial sequence Length = 1345 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 gaggtggaaccatgtctgtctggac 244 ||||||||||||||| ||||||||| Sbjct: 647 gaggtggaaccatgtgtgtctggac 671
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 attgcggctatcaccagttgcaccaacac 446 ||||| || |||||||||||||||||||| Sbjct: 1131108 attgccgccatcaccagttgcaccaacac 1131136
>gb|AC068777.19| Homo sapiens 3 BAC RP11-278D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gtcagattggctttcttgcct 305 ||||||||||||||||||||| Sbjct: 47552 gtcagattggctttcttgcct 47572
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1380743 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1380794
>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence Length = 215002 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 480 ggttgccaaaaaggcttgtgaccta 504 |||||||||||||| |||||||||| Sbjct: 108813 ggttgccaaaaagggttgtgaccta 108837
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 gaaccatgtctgtctggacca 246 ||||||||||||||||||||| Sbjct: 13377 gaaccatgtctgtctggacca 13357
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1426527 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1426578
>gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, complete sequence Length = 175699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 gaaccatgtctgtctggacca 246 ||||||||||||||||||||| Sbjct: 140764 gaaccatgtctgtctggacca 140784
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1391843 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1391894
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1288070 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1288121
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1368040 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1368091
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1352189 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1352240
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 gcaaacatggcaccagnaatatggtgcaactatgggtttcttcccagttgatg 67 |||||||||||||||| | ||||| |||||| || |||||||||||||||| Sbjct: 1350198 gcaaacatggcaccag-agtatggagcaacttgcggattcttcccagttgatg 1350249
>gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, complete sequence Length = 168588 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 ggttgccaaaaaggcttgtgaccta 504 |||||||||||||| |||||||||| Sbjct: 90631 ggttgccaaaaagggttgtgaccta 90607
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 1962466 atcaccagttgcaccaacac 1962485
>gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, complete sequence Length = 175819 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 atcttatcttgaacttgact 214 |||||||||||||||||||| Sbjct: 14712 atcttatcttgaacttgact 14731
>gb|AC112929.12| Mus musculus chromosome 14, clone RP23-432A7, complete sequence Length = 181674 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gtgtattcatcttatcttga 206 |||||||||||||||||||| Sbjct: 43871 gtgtattcatcttatcttga 43852
>ref|NM_030167.1| Mus musculus RIKEN cDNA 4632404H22 gene (4632404H22Rik), mRNA Length = 3543 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcaactatgggtttcttccc 59 |||||||||||||||||||| Sbjct: 1406 gcaactatgggtttcttccc 1387
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 2532039 atcaccagttgcaccaacac 2532058
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 2433848 atcaccagttgcaccaacac 2433867
>gb|AC123802.2| Mus musculus BAC clone RP24-398M15 from 3, complete sequence Length = 121242 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 atcttatcttgaacttgact 214 |||||||||||||||||||| Sbjct: 106646 atcttatcttgaacttgact 106665
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gctatcaccagttgcaccaacaca 447 ||||||||||| |||||||||||| Sbjct: 1935979 gctatcaccagctgcaccaacaca 1936002
>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence Length = 204891 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 atcttatcttgaacttgact 214 |||||||||||||||||||| Sbjct: 201994 atcttatcttgaacttgact 201975
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 2069725 atcaccagttgcaccaacac 2069744
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 2606281 atcaccagttgcaccaacac 2606262
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 7.8 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 21 atggcaccagnaatatggtgcaactatgggtttcttccca 60 |||||||||| |||||||||||||| | |||| ||||||| Sbjct: 811563 atggcaccag-aatatggtgcaactgtaggttacttccca 811525 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 408 tgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcc 455 |||||||||| | || || || |||||||| || |||||||||||||| Sbjct: 811273 tgatgttgtattagctgcaataaccagttgtacaaacacatcaaatcc 811226
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 7.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 404 atggtgatgttgtaattgcggctatcaccagttgcaccaacacatcaaatcc 455 |||||||||||||| | |||||||| || || || |||||||| || ||||| Sbjct: 1178395 atggtgatgttgtagtggcggctattactagctgtaccaacacttccaatcc 1178344
>dbj|AK019480.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632404H22 product:hypothetical protein, full insert sequence Length = 3543 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcaactatgggtttcttccc 59 |||||||||||||||||||| Sbjct: 1406 gcaactatgggtttcttccc 1387
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 271 ttgaagaacatgaagtcagattggctttcttgcctggaca 310 |||||| | ||||| |||||||||| | |||||||||||| Sbjct: 16782191 ttgaaggaaatgaaatcagattggcatgcttgcctggaca 16782230
>gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of the complete genome Length = 10522 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 7967 atcaccagttgcaccaacac 7948
>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequence Length = 358943 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 atcacaaggtaaagttgctg 367 |||||||||||||||||||| Sbjct: 159930 atcacaaggtaaagttgctg 159949
>emb|BX294119.5| Zebrafish DNA sequence from clone CH211-113D22 in linkage group 10, complete sequence Length = 167603 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aaagagtgtattcatcttat 201 |||||||||||||||||||| Sbjct: 36121 aaagagtgtattcatcttat 36140
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 271 ttgaagaacatgaagtcagattggctttcttgcctggaca 310 |||||| | ||||| |||||||||| | |||||||||||| Sbjct: 130885 ttgaaggaaatgaaatcagattggcatgcttgcctggaca 130924
>emb|BX679674.3| Mouse DNA sequence from clone RP23-66H6 on chromosome X, complete sequence Length = 205905 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcaactatgggtttcttccc 59 |||||||||||||||||||| Sbjct: 6503 gcaactatgggtttcttccc 6522
>gb|AC154598.2| Mus musculus BAC clone RP23-356P6 from 14, complete sequence Length = 206646 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gtgtattcatcttatcttga 206 |||||||||||||||||||| Sbjct: 198582 gtgtattcatcttatcttga 198563
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 1994380 atcaccagttgcaccaacac 1994399
>gb|BC066167.1| Mus musculus RIKEN cDNA 4632404H22 gene, mRNA (cDNA clone MGC:76535 IMAGE:30433483), complete cds Length = 3555 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcaactatgggtttcttccc 59 |||||||||||||||||||| Sbjct: 1391 gcaactatgggtttcttccc 1372
>dbj|AK066120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055H16, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 271 ttgaagaacatgaagtcagattggctttcttgcctggaca 310 |||||| | ||||| |||||||||| | |||||||||||| Sbjct: 1566 ttgaaggaaatgaaatcagattggcatgcttgcctggaca 1605
>dbj|AK065937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E22, full insert sequence Length = 3259 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 271 ttgaagaacatgaagtcagattggctttcttgcctggaca 310 |||||| | ||||| |||||||||| | |||||||||||| Sbjct: 1503 ttgaaggaaatgaaatcagattggcatgcttgcctggaca 1542
>emb|CR847539.12| Zebrafish DNA sequence from clone DKEY-96K10 in linkage group 7, complete sequence Length = 104861 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 tatcaccagttgcaccaaca 445 |||||||||||||||||||| Sbjct: 33974 tatcaccagttgcaccaaca 33993
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atcaccagttgcaccaacac 446 |||||||||||||||||||| Sbjct: 2665341 atcaccagttgcaccaacac 2665360
>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome II, complete sequence Length = 350181 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 atcacaaggtaaagttgctg 367 |||||||||||||||||||| Sbjct: 158114 atcacaaggtaaagttgctg 158133
>emb|AL824706.8| Mouse DNA sequence from clone RP23-218A4 on chromosome 4, complete sequence Length = 207687 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 taatgtaatgctgggagctg 475 |||||||||||||||||||| Sbjct: 198383 taatgtaatgctgggagctg 198402
>emb|CR925745.5| Zebrafish DNA sequence from clone DKEYP-100G5 in linkage group 10, complete sequence Length = 197787 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tgaagaacatgaagtcagat 291 |||||||||||||||||||| Sbjct: 148323 tgaagaacatgaagtcagat 148304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,675,016 Number of Sequences: 3902068 Number of extensions: 4675016 Number of successful extensions: 82950 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 82185 Number of HSP's gapped (non-prelim): 778 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
