| Clone Name | bags10a17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF112964.1|AF112964 Triticum aestivum small GTP-binding protein (Sgp) mRNA, complete cds Length = 1136 Score = 710 bits (358), Expect = 0.0 Identities = 412/430 (95%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatga 60 |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct: 486 gtaccacagcctggcgcccatgtactaccgcggcgccgcggccgcgatcgtcgtctacga 545 Query: 61 catcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 catcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcaca 605 Query: 121 agggaatccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 606 agggaatccaaacacagtaatggctcttgctgggaacaaggctgatatgttggaggcaag 665 Query: 181 gcaggtgccagtggaagaagcgacgacttacgcacaagagaatgggctcttcttcatgga 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 666 gcaggtgccagtggaagaagcgacgacttacgcacaagggaatgggctcttcttcattga 725 Query: 241 aacgtctgccaagacagccatcaacgtgaatgacgtattctatgagatcgccaagaggct 300 |||||||||||| ||||||||||| ||||||||||||||||||||| |||| ||||| || Sbjct: 726 aacgtctgccaaaacagccatcaatgtgaatgacgtattctatgagctcgcaaagagact 785 Query: 301 gctcgcggggcagcaggcgcagaacccgcaggcagggatggtgctctcgcagagaccagc 360 ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 786 gctcgcggggcagcaggcgcagaacccgcaggcggggatggtgctctcacagagaccggc 845 Query: 361 cgagaggatggtgagcagcacgtcgtgctgctcatcataggatgcttggccgtggagaga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 cgagaggatggtgagcagcacgtcgtgctgctcatcataggatgcttggccgtggagaga 905 Query: 421 cggctgccat 430 |||| ||||| Sbjct: 906 cggccgccat 915 Score = 280 bits (141), Expect = 6e-72 Identities = 154/157 (98%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 455 atgctctgtggacgattgctgccatcccagcttgctacactacagtctagcccttgtttc 514 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 atgcgctgtggacgattgctgccatcccagcttgctacactacagtctagcccttgtttc 1012 Query: 515 ttgtcatatgttggttctgtaaatgtgaatagtagtggggtgttgctgctgcagatgttc 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 ttgtcatatgttggttctgtaaatgtgaatagtagtggggtgttgctgctgcagatgttc 1072 Query: 575 agatatgttgtggcagttgcattctggtgcttaaata 611 ||||||||||| |||| |||||||||||||||||||| Sbjct: 1073 agatatgttgttgcag-tgcattctggtgcttaaata 1108
>emb|AJ292320.1|OSA292320 Oryza sativa mRNA for RAB5A protein Length = 969 Score = 238 bits (120), Expect = 2e-59 Identities = 312/376 (82%) Strand = Plus / Plus Query: 20 atgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcaccaacgcggcctct 79 |||||||| ||||| || || ||||| || || ||||| |||||||| || ||||||||| Sbjct: 412 atgtactatcgtggtgcggctgccgcaatagttgtctacgacatcacaaatgcggcctct 471 Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 || ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 472 ttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggaaacccaaacacgata 531 Query: 140 atggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgccagtggaagaa 199 |||||||||||||| ||||||||||||||| |||| || ||||||||||||| ||||| Sbjct: 532 atggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtgccagcagaagag 591 Query: 200 gcgacgacttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagcc 259 || | ||| ||||||||||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 592 gcaaagacctacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacagcg 651 Query: 260 atcaacgtgaatgacgtattctatgagatcgccaagaggctgctcgcggggcagcaggcg 319 ||||| ||||| || || ||| | |||||||| ||||| |||| || |||||||| Sbjct: 652 atcaatgtgaacgatgtgttccacgagatcgcaaagagattgcttcaaggacagcaggct 711 Query: 320 cagaacccgcaggcagggatggtgctctcgcagagaccagccgagaggatggtgagcagc 379 || || | | ||| || ||||| ||| ||||||||||| ||||||||||||||||| Sbjct: 712 caagacacaccggctggaatggttctcaaccagagaccagctgagaggatggtgagcagt 771 Query: 380 acgtcgtgctgctcat 395 | || |||||||||| Sbjct: 772 tcttcatgctgctcat 787 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 925 atgttcgttctgtaaatgtgaata 948
>gb|AY029301.1| Oryza sativa small GTP-binding protein (rab5A) mRNA, complete cds Length = 1125 Score = 238 bits (120), Expect = 2e-59 Identities = 312/376 (82%) Strand = Plus / Plus Query: 20 atgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcaccaacgcggcctct 79 |||||||| ||||| || || ||||| || || ||||| |||||||| || ||||||||| Sbjct: 412 atgtactatcgtggtgcggctgccgcaatagttgtctacgacatcacaaatgcggcctct 471 Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 || ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 472 ttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggaaacccaaacacgata 531 Query: 140 atggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgccagtggaagaa 199 |||||||||||||| ||||||||||||||| |||| || ||||||||||||| ||||| Sbjct: 532 atggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtgccagcagaagag 591 Query: 200 gcgacgacttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagcc 259 || | ||| ||||||||||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 592 gcaaagacctacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacagcg 651 Query: 260 atcaacgtgaatgacgtattctatgagatcgccaagaggctgctcgcggggcagcaggcg 319 ||||| ||||| || || ||| | |||||||| ||||| |||| || |||||||| Sbjct: 652 atcaatgtgaacgatgtgttccacgagatcgcaaagagattgcttcaaggacagcaggct 711 Query: 320 cagaacccgcaggcagggatggtgctctcgcagagaccagccgagaggatggtgagcagc 379 || || | | ||| || ||||| ||| ||||||||||| ||||||||||||||||| Sbjct: 712 caagacacaccggctggaatggttctcaaccagagaccagctgagaggatggtgagcagt 771 Query: 380 acgtcgtgctgctcat 395 | || |||||||||| Sbjct: 772 tcttcatgctgctcat 787 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 925 atgttcgttctgtaaatgtgaata 948
>dbj|AK061116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E04, full insert sequence Length = 1043 Score = 230 bits (116), Expect = 5e-57 Identities = 311/376 (82%) Strand = Plus / Plus Query: 20 atgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcaccaacgcggcctct 79 |||||||| || || || || ||||| || || ||||| |||||||| || ||||||||| Sbjct: 413 atgtactatcggggtgcggctgccgcgatagttgtctacgacatcacaaatgcggcctct 472 Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 || ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 473 ttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggaaacccaaacacgata 532 Query: 140 atggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgccagtggaagaa 199 |||||||||||||| ||||||||||||||| |||| || ||||||||||||| ||||| Sbjct: 533 atggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtgccagcagaagag 592 Query: 200 gcgacgacttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagcc 259 || | ||| ||||||||||||||||| || |||||||||||||| ||||| || || || Sbjct: 593 gcaaagacctacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacggcg 652 Query: 260 atcaacgtgaatgacgtattctatgagatcgccaagaggctgctcgcggggcagcaggcg 319 ||||| ||||| || |||||| | |||||||| ||||| |||| || |||||||| Sbjct: 653 atcaatgtgaacgatgtattccacgagatcgcaaagagattgcttcaaggacagcaggct 712 Query: 320 cagaacccgcaggcagggatggtgctctcgcagagaccagccgagaggatggtgagcagc 379 || || | | ||| || ||||| ||| ||||||||||| ||||||||||||||||| Sbjct: 713 caagacacaccggctggaatggttctcaaccagagaccagctgagaggatggtgagcagt 772 Query: 380 acgtcgtgctgctcat 395 | || |||||||||| Sbjct: 773 tcttcatgctgctcat 788 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 923 atgttcgttctgtaaatgtgaata 946
>dbj|AK066784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I11, full insert sequence Length = 1032 Score = 226 bits (114), Expect = 8e-56 Identities = 237/278 (85%) Strand = Plus / Plus Query: 20 atgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcaccaacgcggcctct 79 |||||||| || || || || ||||| || || ||||| |||||||| || ||||||||| Sbjct: 345 atgtactatcggggtgcggctgccgcgatagttgtctacgacatcacaaatgcggcctct 404 Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 || ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 405 ttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggaaacccaaacacgata 464 Query: 140 atggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgccagtggaagaa 199 |||||||||||||| ||||||||||||||| |||| || ||||||||||||| ||||| Sbjct: 465 atggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtgccagcagaagag 524 Query: 200 gcgacgacttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagcc 259 || | ||| ||||||||||||||||| || |||||||||||||| ||||| || || || Sbjct: 525 gcaaagacctacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacggcg 584 Query: 260 atcaacgtgaatgacgtattctatgagatcgccaagag 297 ||||| ||||| || |||||| | |||||||| ||||| Sbjct: 585 atcaatgtgaacgatgtattccacgagatcgcaaagag 622 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 855 atgttcgttctgtaaatgtgaata 878
>gb|AY104686.1| Zea mays PCO088233 mRNA sequence Length = 1239 Score = 178 bits (90), Expect = 2e-41 Identities = 213/254 (83%) Strand = Plus / Plus Query: 44 gccatcgtcgtctatgacatcaccaacgcggcctcttttacacgtgcaaagaaatgggtt 103 ||||| || |||||||||||||| || ||||||| || || ||||| |||||||||||| Sbjct: 452 gccattgttgtctatgacatcacaaatccggcctccttcacccgtgccaagaaatgggtt 511 Query: 104 caagaacttcaagcacaagggaatccaaacacagtaatggctcttgctgggaacaaggct 163 |||||||||||||| ||||| |||| || ||| || ||||||||||||| ||||||| | Sbjct: 512 caagaacttcaagctcaaggaaatcagaatacaatagtggctcttgctggaaacaaggtt 571 Query: 164 gatatgctagaagcaaggcaggtgccagtggaagaagcgacgacttacgcacaagagaat 223 ||||||||||| || ||||||||||||| || ||||| | | | || || || |||||| Sbjct: 572 gatatgctagatgcgaggcaggtgccagcagaggaagcaaaggcgtatgcccaggagaat 631 Query: 224 gggctcttcttcatggaaacgtctgccaagacagccatcaacgtgaatgacgtattctat 283 ||||||||||||||||| || ||||| || || || ||||| ||||||||| |||| ||| Sbjct: 632 gggctcttcttcatggagacatctgctaaaactgcaatcaatgtgaatgacatattttat 691 Query: 284 gagatcgccaagag 297 ||||| || ||||| Sbjct: 692 gagattgcaaagag 705
>gb|AY107131.1| Zea mays PCO080814 mRNA sequence Length = 559 Score = 163 bits (82), Expect = 9e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatga 60 |||||||||| |||| |||||||| ||||| ||||| || || ||||| || ||||| || Sbjct: 384 gtaccacagcttggctcccatgtattaccggggcgctgcggctgccatagttgtctacga 443 Query: 61 catcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcaca 120 |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 444 catcacgaacgcggcctcttttacgcgtgcgaagaaatgggttcaagaacttcaagcaca 503 Query: 121 agggaatccaaacacagtaatggctcttgctgggaacaaggctgat 166 ||| || | || ||| || |||||||||| ||||||||||||||| Sbjct: 504 aggaaactcgaatacaatagtggctcttgccgggaacaaggctgat 549
>gb|AY112178.1| Zea mays CL13607_1 mRNA sequence Length = 614 Score = 157 bits (79), Expect = 6e-35 Identities = 238/291 (81%) Strand = Plus / Minus Query: 86 cgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggct 145 ||||| |||||||||||||||||||||||||| ||||| || | || ||| || ||||| Sbjct: 612 cgtgcgaagaaatgggttcaagaacttcaagcccaaggaaactcgaatacaatagtggct 553 Query: 146 cttgctgggaacaaggctgatatgctagaagcaaggcaggtgccagtggaagaagcgacg 205 ||||| ||||||||||||||| || |||| | ||||||||| ||| || ||||| | | Sbjct: 552 cttgccgggaacaaggctgatttgttagatacgaggcaggtgtcagcagatgaagcaaag 493 Query: 206 acttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccatcaac 265 | || || ||||||||||| ||||||||||||||||| |||||||| ||||| | ||| Sbjct: 492 gcgtatgctcaagagaatggtctcttcttcatggaaacttctgccaaaacagctaccaat 433 Query: 266 gtgaatgacgtattctatgagatcgccaagaggctgctcgcggggcagcaggcgcagaac 325 ||||| ||||| ||||||||||| || |||| ||||| |||||||||| |||||| Sbjct: 432 gtgaacgacgtgttctatgagattgcgaagaaactgcttcaagggcagcaggttcagaac 373 Query: 326 ccgcaggcagggatggtgctctcgcagagaccagccgagaggatggtgagc 376 || || | |||||||| ||| ||||||||| | ||||||||||||||| Sbjct: 372 ccacaaggcgggatggttctcaaccagagaccacctgagaggatggtgagc 322
>ref|XM_469184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1046 Score = 147 bits (74), Expect = 6e-32 Identities = 284/354 (80%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 |||||| |||| ||||||||||| | || || || || ||||| || |||||||||||| Sbjct: 381 cacagcttggctcccatgtactataggggtgcggctgctgccatagttgtctatgacatc 440 Query: 65 accaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaaggg 124 || || |||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 441 acgaatccggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaaggt 500 Query: 125 aatccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcag 184 || | | ||||| ||||||||||||| ||||| || ||| ||||||| | |||||| Sbjct: 501 aactcgagtacagtggtggctcttgctggcaacaaagccgatttgctagagactaggcag 560 Query: 185 gtgccagtggaagaagcgacgacttacgcacaagagaatgggctcttcttcatggaaacg 244 |||| | | || ||||| | ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 561 gtgcaaatagaggaagcaaagacatatgcacaggagaatgggcttttcttcatggaaaca 620 Query: 245 tctgccaagacagccatcaacgtgaatgacgtattctatgagatcgccaagaggctgctc 304 ||||| || || || | || ||||||||| |||| ||||| || || || || |||| Sbjct: 621 tctgcgaaaactgcaacaaatgtgaatgacatattttatgaaattgcaaaaagattgctt 680 Query: 305 gcggggcagcaggcgcagaacccgcaggcagggatggtgctctcgcagagacca 358 || |||| || |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 681 caaggacagccagctcagaacccgcaggccggcatggtcctctcccagagacca 734
>dbj|AK067459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107F02, full insert sequence Length = 891 Score = 147 bits (74), Expect = 6e-32 Identities = 284/354 (80%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 |||||| |||| ||||||||||| | || || || || ||||| || |||||||||||| Sbjct: 289 cacagcttggctcccatgtactataggggtgcggctgctgccatagttgtctatgacatc 348 Query: 65 accaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaaggg 124 || || |||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 349 acgaatccggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaaggt 408 Query: 125 aatccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcag 184 || | | ||||| ||||||||||||| ||||| || ||| ||||||| | |||||| Sbjct: 409 aactcgagtacagtggtggctcttgctggcaacaaagccgatttgctagagactaggcag 468 Query: 185 gtgccagtggaagaagcgacgacttacgcacaagagaatgggctcttcttcatggaaacg 244 |||| | | || ||||| | ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 469 gtgcaaatagaggaagcaaagacatatgcacaggagaatgggcttttcttcatggaaaca 528 Query: 245 tctgccaagacagccatcaacgtgaatgacgtattctatgagatcgccaagaggctgctc 304 ||||| || || || | || ||||||||| |||| ||||| || || || || |||| Sbjct: 529 tctgcgaaaactgcaacaaatgtgaatgacatattttatgaaattgcaaaaagattgctt 588 Query: 305 gcggggcagcaggcgcagaacccgcaggcagggatggtgctctcgcagagacca 358 || |||| || |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 589 caaggacagccagctcagaacccgcaggccggcatggtcctctcccagagacca 642
>dbj|AK061203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B04, full insert sequence Length = 1101 Score = 147 bits (74), Expect = 6e-32 Identities = 284/354 (80%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 |||||| |||| ||||||||||| | || || || || ||||| || |||||||||||| Sbjct: 406 cacagcttggctcccatgtactataggggtgcggctgctgccatagttgtctatgacatc 465 Query: 65 accaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaaggg 124 || || |||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 466 acgaatccggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaaggt 525 Query: 125 aatccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcag 184 || | | ||||| ||||||||||||| ||||| || ||| ||||||| | |||||| Sbjct: 526 aactcgagtacagtggtggctcttgctggcaacaaagccgatttgctagagactaggcag 585 Query: 185 gtgccagtggaagaagcgacgacttacgcacaagagaatgggctcttcttcatggaaacg 244 |||| | | || ||||| | ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 586 gtgcaaatagaggaagcaaagacatatgcacaggagaatgggcttttcttcatggaaaca 645 Query: 245 tctgccaagacagccatcaacgtgaatgacgtattctatgagatcgccaagaggctgctc 304 ||||| || || || | || ||||||||| |||| ||||| || || || || |||| Sbjct: 646 tctgcgaaaactgcaacaaatgtgaatgacatattttatgaaattgcaaaaagattgctt 705 Query: 305 gcggggcagcaggcgcagaacccgcaggcagggatggtgctctcgcagagacca 358 || |||| || |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 706 caaggacagccagctcagaacccgcaggccggcatggtcctctcccagagacca 759
>dbj|AK100036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150K06, full insert sequence Length = 1046 Score = 145 bits (73), Expect = 2e-31 Identities = 202/245 (82%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 |||||| |||| ||||||||||| | || || || || ||||| || |||||||||||| Sbjct: 381 cacagcttggctcccatgtactataggggtgcggctgctgccatagttgtctatgacatc 440 Query: 65 accaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaaggg 124 || || |||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 441 acgaatccggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaaggt 500 Query: 125 aatccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcag 184 || | | ||||| ||||||||||||| ||||| || ||| ||||||| | |||||| Sbjct: 501 aactcgagtacagtggtggctcttgctggcaacaaagccgatttgctagagactaggcag 560 Query: 185 gtgccagtggaagaagcgacgacttacgcacaagagaatgggctcttcttcatggaaacg 244 |||| | | || ||||| | ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 561 gtgcaaatagaggaagcaaagacatatgcacaggagaatgggcttttcttcatggaaaca 620 Query: 245 tctgc 249 ||||| Sbjct: 621 tctgc 625 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 320 cagaacccgcaggcagggatggtgctctcgcagagacca 358 |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 696 cagaacccgcaggccggcatggtcctctcccagagacca 734
>emb|AJ437656.1|SCH437656 Simmondsia chinensis mRNA for Rab-related small GTP-binding protein (rab gene) Length = 837 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 12 tggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcaccaacg 71 |||| |||||||||||| | |||||||| || ||||| | |||||||||||||||| || Sbjct: 254 tggctcccatgtactacagaggcgccgcagctgccattattgtctatgacatcaccagcg 313 Query: 72 cggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaa 131 ||| || ||| ||| ||| ||||||||||| || |||||||| ||||| ||||||| Sbjct: 314 cggattcatttgcacttgctaagaaatgggtacaggaacttcagaagcaaggaaatccaa 373 Query: 132 acacagtaatggctcttgctgggaacaaggctgat 166 ||| |||||||| ||||| || ||||| |||||| Sbjct: 374 acatggtaatggcacttgcaggcaacaaagctgat 408
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatcca 130 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 27059833 ggcctctttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggtaatcca 27059890 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 128 ccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtg 187 |||||||| |||||||||||||||| ||||||||||||||| |||| || ||||||||| Sbjct: 27060089 ccaaacacgataatggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtg 27060148 Query: 188 ccag 191 |||| Sbjct: 27060149 ccag 27060152 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 209 tacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccatcaacgtg 268 ||||||||||||||||| || |||||||||||||| ||||| || || || ||||| ||| Sbjct: 27060704 tacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacggcgatcaatgtg 27060763 Query: 269 aatgacgtattctatgagatcg 290 || || |||||| | ||||||| Sbjct: 27060764 aacgatgtattccacgagatcg 27060785 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 350 cagagaccagccgagaggatggtgagcagcacgtcgtgctgctcat 395 ||||||||||| ||||||||||||||||| | || |||||||||| Sbjct: 27060983 cagagaccagctgagaggatggtgagcagttcttcatgctgctcat 27061028 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 27061163 atgttcgttctgtaaatgtgaata 27061186 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctaccgtggcgccgccgccg 44 |||||||||||||||||||| Sbjct: 10206215 ctaccgtggcgccgccgccg 10206196
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatcca 130 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 26985422 ggcctctttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggtaatcca 26985479 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 128 ccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtg 187 |||||||| |||||||||||||||| ||||||||||||||| |||| || ||||||||| Sbjct: 26985678 ccaaacacgataatggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtg 26985737 Query: 188 ccag 191 |||| Sbjct: 26985738 ccag 26985741 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 209 tacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccatcaacgtg 268 ||||||||||||||||| || |||||||||||||| ||||| || || || ||||| ||| Sbjct: 26986293 tacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacggcgatcaatgtg 26986352 Query: 269 aatgacgtattctatgagatcg 290 || || |||||| | ||||||| Sbjct: 26986353 aacgatgtattccacgagatcg 26986374 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 350 cagagaccagccgagaggatggtgagcagcacgtcgtgctgctcat 395 ||||||||||| ||||||||||||||||| | || |||||||||| Sbjct: 26986572 cagagaccagctgagaggatggtgagcagttcttcatgctgctcat 26986617 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 26986752 atgttcgttctgtaaatgtgaata 26986775 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctaccgtggcgccgccgccg 44 |||||||||||||||||||| Sbjct: 10206097 ctaccgtggcgccgccgccg 10206078
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatcca 130 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 96404 ggcctctttcacacgtgcaaaaaaatgggttcaagaacttcaagcgcaaggtaatcca 96347 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 128 ccaaacacagtaatggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtg 187 |||||||| |||||||||||||||| ||||||||||||||| |||| || ||||||||| Sbjct: 96148 ccaaacacgataatggctcttgctggtaacaaggctgatatggtagaggcgaggcaggtg 96089 Query: 188 ccag 191 |||| Sbjct: 96088 ccag 96085 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 209 tacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccatcaacgtg 268 ||||||||||||||||| || |||||||||||||| ||||| || || || ||||| ||| Sbjct: 95533 tacgcacaagagaatggccttttcttcatggaaacatctgcgaaaacggcgatcaatgtg 95474 Query: 269 aatgacgtattctatgagatcg 290 || || |||||| | ||||||| Sbjct: 95473 aacgatgtattccacgagatcg 95452 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 350 cagagaccagccgagaggatggtgagcagcacgtcgtgctgctcat 395 ||||||||||| ||||||||||||||||| | || |||||||||| Sbjct: 95254 cagagaccagctgagaggatggtgagcagttcttcatgctgctcat 95209 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 atgttggttctgtaaatgtgaata 545 ||||| |||||||||||||||||| Sbjct: 95074 atgttcgttctgtaaatgtgaata 95051
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 25949684 ggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaagg 25949734 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 212 gcacaagagaatgggctcttcttcatggaaacgtctgc 249 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 25953594 gcacaggagaatgggcttttcttcatggaaacatctgc 25953631 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 320 cagaacccgcaggcagggatggtgctctcgcagagacca 358 |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 25953888 cagaacccgcaggccggcatggtcctctcccagagacca 25953926 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 27434878 cgccgccgccgccatcgtcgtc 27434857 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 5412078 gccgccgccgccatcgtcgtc 5412098 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ggcgccgccgccgccatcgtcgtct 56 ||||||||| ||||||||||||||| Sbjct: 965675 ggcgccgccaccgccatcgtcgtct 965651 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ggcgccgccgccgccatcgtcgtc 55 ||||||||||||||| |||||||| Sbjct: 27111938 ggcgccgccgccgccgtcgtcgtc 27111961 Score = 40.1 bits (20), Expect = 9.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 tggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgc 188 ||||||||||||| ||||| || ||| ||||||| | |||||||||| Sbjct: 25950211 tggctcttgctggcaacaaagccgatttgctagagactaggcaggtgc 25950258
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 58236 ggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaagg 58186 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 212 gcacaagagaatgggctcttcttcatggaaacgtctgc 249 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 54326 gcacaggagaatgggcttttcttcatggaaacatctgc 54289 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 320 cagaacccgcaggcagggatggtgctctcgcagagacca 358 |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 54032 cagaacccgcaggccggcatggtcctctcccagagacca 53994 Score = 40.1 bits (20), Expect = 9.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 141 tggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgc 188 ||||||||||||| ||||| || ||| ||||||| | |||||||||| Sbjct: 57709 tggctcttgctggcaacaaagccgatttgctagagactaggcaggtgc 57662
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||| Sbjct: 28267904 taccacagccttgcgcccatgtactaccgcggcgcggccgccgctgtcgtcgtctacgac 28267963 Query: 62 atc 64 ||| Sbjct: 28267964 atc 28267966
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 73 ggcctcttttacacgtgcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 26040993 ggcctctttcacccgtgcaaagaaatgggttcaagaacttcaagctcaagg 26041043 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 212 gcacaagagaatgggctcttcttcatggaaacgtctgc 249 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 26044903 gcacaggagaatgggcttttcttcatggaaacatctgc 26044940 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 320 cagaacccgcaggcagggatggtgctctcgcagagacca 358 |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 26045197 cagaacccgcaggccggcatggtcctctcccagagacca 26045235 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 27526201 cgccgccgccgccatcgtcgtc 27526180 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 5411293 gccgccgccgccatcgtcgtc 5411313 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ggcgccgccgccgccatcgtcgtct 56 ||||||||| ||||||||||||||| Sbjct: 965673 ggcgccgccaccgccatcgtcgtct 965649 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ggcgccgccgccgccatcgtcgtc 55 ||||||||||||||| |||||||| Sbjct: 27203261 ggcgccgccgccgccgtcgtcgtc 27203284 Score = 40.1 bits (20), Expect = 9.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 tggctcttgctgggaacaaggctgatatgctagaagcaaggcaggtgc 188 ||||||||||||| ||||| || ||| ||||||| | |||||||||| Sbjct: 26041520 tggctcttgctggcaacaaagccgatttgctagagactaggcaggtgc 26041567
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||| Sbjct: 65933 taccacagccttgcgcccatgtactaccgcggcgcggccgccgctgtcgtcgtctacgac 65992 Query: 62 atc 64 ||| Sbjct: 65993 atc 65995
>ref|XM_589241.2| PREDICTED: Bos taurus similar to Ras-related protein Rab-5A, transcript variant 1 (LOC539764), mRNA Length = 2076 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatga 60 |||||||||||||||||||||||||||| | |||||| |||||||| ||||| || || Sbjct: 417 gtaccacagcctggcgcccatgtactacagaggcgcccaggccgccatagtcgtgtacga 476 Query: 61 catcaccaacg 71 |||||| |||| Sbjct: 477 catcacgaacg 487
>ref|XM_864602.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-5A, transcript variant 2 (LOC539764), mRNA Length = 2097 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatga 60 |||||||||||||||||||||||||||| | |||||| |||||||| ||||| || || Sbjct: 438 gtaccacagcctggcgcccatgtactacagaggcgcccaggccgccatagtcgtgtacga 497 Query: 61 catcaccaacg 71 |||||| |||| Sbjct: 498 catcacgaacg 508
>emb|AJ249867.1|CIN249867 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (b1.5 gene) Length = 501 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 72 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 131 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 132 atggcacttgctggaaataaagctgat 158
>emb|AJ249866.1|CIN249866 Cichorium intybus x Cichorium endivia partial mRNA for GTP binding protein (gtp2 gene) Length = 650 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 330 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 389 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 390 atggcacttgctggaaataaagctgat 416
>emb|AJ249865.1|CIN249865 Cichorium intybus x Cichorium endivia partial mRNA for GTP binding protein (gtp1 gene) Length = 767 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 445 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 504 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 505 atggcacttgctggaaataaagctgat 531
>emb|AJ296336.1|CIN296336 Cichorium intybus X Cichorium endivia mRNA for GTP binding protein (chi3154 gene) Length = 797 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 341 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 400 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 401 atggcacttgctggaaataaagctgat 427
>emb|AJ296335.1|CIN296335 Cichorium intybus X Cichorium endivia mRNA for GTP binding protein (chi3152 gene) Length = 776 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 331 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 390 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 391 atggcacttgctggaaataaagctgat 417
>emb|AJ296334.1|CIN296334 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (chi3153 gene) Length = 749 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 281 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 340 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 341 atggcacttgctggaaataaagctgat 367
>emb|AJ296333.1|CIN296333 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (chi3151 gene) Length = 743 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 80 tttacacgtgcaaagaaatgggttcaagaacttcaagcacaagggaatccaaacacagta 139 |||||||| || || || |||||||||||||||||| |||||| |||||||||| ||| Sbjct: 281 tttacacgggctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggta 340 Query: 140 atggctcttgctgggaacaaggctgat 166 ||||| |||||||| || || |||||| Sbjct: 341 atggcacttgctggaaataaagctgat 367
>gb|AY389780.1| Hyacinthus orientalis ras-related protein mRNA, partial cds Length = 505 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 221 aatgggctcttcttcatggaaacgtctgccaagacagccatcaacgtgaatgacgtattc 280 ||||| || |||||| ||||||| ||||| || || |||||||| |||||||| |||||| Sbjct: 126 aatggcctattcttcctggaaacctctgctaaaaccgccatcaatgtgaatgatgtattc 185 Query: 281 tatgagat 288 |||||||| Sbjct: 186 tatgagat 193
>ref|XM_511501.1| PREDICTED: Pan troglodytes similar to General control of amino acid synthesis protein 5-like 2 (Histone acetyltransferase GCN5) (mmGCN5) (LOC454678), mRNA Length = 1174 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 338 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 397 Query: 65 accaac 70 |||||| Sbjct: 398 accaac 403
>gb|BC106039.1| Homo sapiens RAB5C, member RAS oncogene family, transcript variant 2, mRNA (cDNA clone MGC:117217 IMAGE:4938169), complete cds Length = 1668 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 449 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 508 Query: 65 accaac 70 |||||| Sbjct: 509 accaac 514
>ref|NM_004583.2| Homo sapiens RAB5C, member RAS oncogene family (RAB5C), transcript variant 2, mRNA Length = 1674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 450 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 509 Query: 65 accaac 70 |||||| Sbjct: 510 accaac 515
>ref|NM_201434.1| Homo sapiens RAB5C, member RAS oncogene family (RAB5C), transcript variant 1, mRNA Length = 1791 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 567 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 626 Query: 65 accaac 70 |||||| Sbjct: 627 accaac 632
>gb|BT019484.1| Homo sapiens RAB5C, member RAS oncogene family mRNA, complete cds Length = 651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 250 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 309 Query: 65 accaac 70 |||||| Sbjct: 310 accaac 315
>emb|Z27110.1|CFRAB5C C.familiaris mRNA for Rab5c protein Length = 763 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 352 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 411 Query: 65 accaac 70 |||||| Sbjct: 412 accaac 417
>emb|CR860097.1| Pongo pygmaeus mRNA; cDNA DKFZp468C168 (from clone DKFZp468C168) Length = 1650 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 435 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 494 Query: 65 accaac 70 |||||| Sbjct: 495 accaac 500
>emb|CR626803.1| full-length cDNA clone CS0DI004YB12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1558 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 406 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 465 Query: 65 accaac 70 |||||| Sbjct: 466 accaac 471
>emb|CR625641.1| full-length cDNA clone CS0DI053YE06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1577 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 408 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 467 Query: 65 accaac 70 |||||| Sbjct: 468 accaac 473
>emb|CR625174.1| full-length cDNA clone CS0DI013YF02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1531 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 389 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 448 Query: 65 accaac 70 |||||| Sbjct: 449 accaac 454
>emb|CR624854.1| full-length cDNA clone CS0DH002YK07 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1610 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 429 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 488 Query: 65 accaac 70 |||||| Sbjct: 489 accaac 494
>emb|CR623581.1| full-length cDNA clone CS0DI044YG15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1576 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 406 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 465 Query: 65 accaac 70 |||||| Sbjct: 466 accaac 471
>emb|CR622103.1| full-length cDNA clone CS0DI086YP22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1568 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 392 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 451 Query: 65 accaac 70 |||||| Sbjct: 452 accaac 457
>emb|CR621567.1| full-length cDNA clone CS0DC023YN19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1565 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 406 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 465 Query: 65 accaac 70 |||||| Sbjct: 466 accaac 471
>emb|CR620573.1| full-length cDNA clone CS0DE008YO18 of Placenta of Homo sapiens (human) Length = 1661 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 459 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 518 Query: 65 accaac 70 |||||| Sbjct: 519 accaac 524
>emb|CR620653.1| full-length cDNA clone CS0DF002YO05 of Fetal brain of Homo sapiens (human) Length = 1721 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 546 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 605 Query: 65 accaac 70 |||||| Sbjct: 606 accaac 611
>emb|CR617879.1| full-length cDNA clone CS0DD007YI09 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1336 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 162 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 221 Query: 65 accaac 70 |||||| Sbjct: 222 accaac 227
>emb|CR617757.1| full-length cDNA clone CS0DI010YH11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1598 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 424 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 483 Query: 65 accaac 70 |||||| Sbjct: 484 accaac 489
>emb|CR615479.1| full-length cDNA clone CS0DA009YL15 of Neuroblastoma of Homo sapiens (human) Length = 1607 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 424 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 483 Query: 65 accaac 70 |||||| Sbjct: 484 accaac 489
>emb|CR613867.1| full-length cDNA clone CS0DC028YA10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1584 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 424 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 483 Query: 65 accaac 70 |||||| Sbjct: 484 accaac 489
>emb|CR612483.1| full-length cDNA clone CS0DH005YE20 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1414 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 259 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 318 Query: 65 accaac 70 |||||| Sbjct: 319 accaac 324
>emb|CR612169.1| full-length cDNA clone CS0DI006YD09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1500 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 338 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 397 Query: 65 accaac 70 |||||| Sbjct: 398 accaac 403
>emb|CR611639.1| full-length cDNA clone CS0DE004YH07 of Placenta of Homo sapiens (human) Length = 1602 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 416 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 475 Query: 65 accaac 70 |||||| Sbjct: 476 accaac 481
>emb|CR607787.1| full-length cDNA clone CS0DI010YF11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1595 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 424 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 483 Query: 65 accaac 70 |||||| Sbjct: 484 accaac 489
>emb|CR607771.1| full-length cDNA clone CS0DI077YG09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1620 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 446 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 505 Query: 65 accaac 70 |||||| Sbjct: 506 accaac 511
>emb|CR608029.1| full-length cDNA clone CS0DC015YE20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 416 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 475 Query: 65 accaac 70 |||||| Sbjct: 476 accaac 481
>emb|CR603551.1| full-length cDNA clone CS0DM007YF04 of Fetal liver of Homo sapiens (human) Length = 1599 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 429 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 488 Query: 65 accaac 70 |||||| Sbjct: 489 accaac 494
>emb|CR601486.1| full-length cDNA clone CS0DA006YF19 of Neuroblastoma of Homo sapiens (human) Length = 1570 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 408 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 467 Query: 65 accaac 70 |||||| Sbjct: 468 accaac 473
>emb|CR600565.1| full-length cDNA clone CS0DI075YN07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1599 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 422 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 481 Query: 65 accaac 70 |||||| Sbjct: 482 accaac 487
>emb|CR600279.1| full-length cDNA clone CS0DB005YK02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1591 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 418 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 477 Query: 65 accaac 70 |||||| Sbjct: 478 accaac 483
>emb|CR599091.1| full-length cDNA clone CS0DI081YC13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 422 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 481 Query: 65 accaac 70 |||||| Sbjct: 482 accaac 487
>emb|CR595237.1| full-length cDNA clone CL0BA011ZH04 of Placenta of Homo sapiens (human) Length = 1632 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 424 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 483 Query: 65 accaac 70 |||||| Sbjct: 484 accaac 489
>emb|CR591906.1| full-length cDNA clone CS0DI042YG22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1589 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 422 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 481 Query: 65 accaac 70 |||||| Sbjct: 482 accaac 487
>emb|CR591636.1| full-length cDNA clone CS0DI022YM14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1590 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 418 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 477 Query: 65 accaac 70 |||||| Sbjct: 478 accaac 483
>gb|AF498938.1| Homo sapiens small GTP binding protein RAB5C (RAB5C) mRNA, complete cds Length = 651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 250 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 309 Query: 65 accaac 70 |||||| Sbjct: 310 accaac 315
>emb|CR541901.1| Homo sapiens full open reading frame cDNA clone RZPDo834B1233D for gene RAB5C, RAB5C, member RAS oncogene family; complete cds, incl. stopcodon Length = 651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 250 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 309 Query: 65 accaac 70 |||||| Sbjct: 310 accaac 315
>ref|NM_001003261.1| Canis familiaris RAB5C, member RAS oncogene family (RAB5C), mRNA Length = 763 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 352 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 411 Query: 65 accaac 70 |||||| Sbjct: 412 accaac 417
>gb|AC099811.7| Homo sapiens chromosome 17, clone RP11-358B23, complete sequence Length = 174902 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 454 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 395 Query: 65 accaac 70 |||||| Sbjct: 394 accaac 389
>gb|AF141304.1|AF141304 Homo sapiens small GTPase (RAB5C) mRNA, complete cds Length = 729 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 319 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 378 Query: 65 accaac 70 |||||| Sbjct: 379 accaac 384
>gb|AY888260.1| Synthetic construct Homo sapiens clone FLH009616.01X RAB5C member RAS oncogene family (RAB5C) mRNA, complete cds Length = 651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 250 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 309 Query: 65 accaac 70 |||||| Sbjct: 310 accaac 315
>dbj|AK025474.1| Homo sapiens cDNA: FLJ21821 fis, clone HEP01311, highly similar to HSU18420 Human ras-related small GTP binding protein Rab5 (rab5) mRNA Length = 2378 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 1154 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 1213 Query: 65 accaac 70 |||||| Sbjct: 1214 accaac 1219
>gb|AY893587.1| Synthetic construct Homo sapiens clone FLH130878.01X RAB5C member RAS oncogene family (RAB5C) mRNA, complete cds Length = 651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 250 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 309 Query: 65 accaac 70 |||||| Sbjct: 310 accaac 315
>gb|AC003104.1|AC003104 Homo sapiens chromosome 17, clone HCIT48C15, complete sequence Length = 100635 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 9603 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 9662 Query: 65 accaac 70 |||||| Sbjct: 9663 accaac 9668
>gb|U18420.1|HSU18420 Human ras-related small GTP binding protein Rab5 (rab5) mRNA, complete cds Length = 1590 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 385 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 444 Query: 65 accaac 70 |||||| Sbjct: 445 accaac 450
>gb|U11293.1|HSU11293 Human Rab5c-like protein mRNA, complete cds Length = 1529 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| |||||||||||| Sbjct: 325 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctatgacatc 384 Query: 65 accaac 70 |||||| Sbjct: 385 accaac 390
>gb|DQ215564.1| Taeniopygia guttata clone 0061P0006C04 RAB5C member RAS oncogene family-like mRNA, complete sequence Length = 1393 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||||||||| |||||||||||||| || || || |||||||| ||||| ||| Sbjct: 391 taccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtctacgac 450 Query: 62 atcaccaac 70 ||||||||| Sbjct: 451 atcaccaac 459
>gb|BT012805.1| Lycopersicon esculentum clone 113821R, mRNA sequence Length = 978 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagggaatcc 129 ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 472 gcaaaaaaatgggttcaggaacttcaagcacaaggtaatcc 512 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 218 gagaatgggctcttcttcatggaaacgtctgc 249 |||||||| || |||||||||||||| ||||| Sbjct: 601 gagaatggtctgttcttcatggaaacatctgc 632
>ref|NM_123881.2| Arabidopsis thaliana RHA1 AT5G45130 (RHA1) mRNA, complete cds Length = 1215 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 92 aagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggctcttgct 151 |||||||||||||| ||||| || |||||||| || || || | || |||||||||||| Sbjct: 533 aagaaatgggttcaggaactgcaggcacaaggtaaccctaatatggtgatggctcttgct 592 Query: 152 gggaacaaggctgatatgctagaagcaaggcaggtg 187 || ||||| |||||| | |||| |||||| ||||| Sbjct: 593 ggaaacaaagctgatttattagacgcaaggaaggtg 628
>emb|X59152.1|ATRHA1 A.thaliana mRNA for RHA1 GTP-binding protein Length = 900 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 92 aagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggctcttgct 151 |||||||||||||| ||||| || |||||||| || || || | || |||||||||||| Sbjct: 364 aagaaatgggttcaggaactgcaggcacaaggtaaccctaatatggtgatggctcttgct 423 Query: 152 gggaacaaggctgatatgctagaagcaaggcaggtg 187 || ||||| |||||| | |||| |||||| ||||| Sbjct: 424 ggaaacaaagctgatttattagacgcaaggaaggtg 459
>gb|AY097362.1| Arabidopsis thaliana AT5g45130/K17O22_15 mRNA, complete cds Length = 603 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 92 aagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggctcttgct 151 |||||||||||||| ||||| || |||||||| || || || | || |||||||||||| Sbjct: 304 aagaaatgggttcaggaactgcaggcacaaggtaaccctaatatggtgatggctcttgct 363 Query: 152 gggaacaaggctgatatgctagaagcaaggcaggtg 187 || ||||| |||||| | |||| |||||| ||||| Sbjct: 364 ggaaacaaagctgatttattagacgcaaggaaggtg 399
>gb|AF389298.1|AF389298 Arabidopsis thaliana AT5g45130/K17O22_15 mRNA, complete cds Length = 1003 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 92 aagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggctcttgct 151 |||||||||||||| ||||| || |||||||| || || || | || |||||||||||| Sbjct: 491 aagaaatgggttcaggaactgcaggcacaaggtaaccctaatatggtgatggctcttgct 550 Query: 152 gggaacaaggctgatatgctagaagcaaggcaggtg 187 || ||||| |||||| | |||| |||||| ||||| Sbjct: 551 ggaaacaaagctgatttattagacgcaaggaaggtg 586
>gb|AY089141.1| Arabidopsis thaliana clone 37862 mRNA, complete sequence Length = 1218 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 92 aagaaatgggttcaagaacttcaagcacaagggaatccaaacacagtaatggctcttgct 151 |||||||||||||| ||||| || |||||||| || || || | || |||||||||||| Sbjct: 535 aagaaatgggttcaggaactgcaggcacaaggtaaccctaatatggtgatggctcttgct 594 Query: 152 gggaacaaggctgatatgctagaagcaaggcaggtg 187 || ||||| |||||| | |||| |||||| ||||| Sbjct: 595 ggaaacaaagctgatttattagacgcaaggaaggtg 630
>gb|BC029678.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone MGC:36507 IMAGE:5368061), complete cds Length = 1587 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 617 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 659 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 391 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 450 Query: 65 accaac 70 |||||| Sbjct: 451 accaac 456
>gb|BC023027.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone MGC:36517 IMAGE:5369566), complete cds Length = 1620 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 633 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 675 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 407 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 466 Query: 65 accaac 70 |||||| Sbjct: 467 accaac 472
>ref|NM_024456.1| Mus musculus RAB5C, member RAS oncogene family (Rab5c), mRNA Length = 1943 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 732 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 774 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 452 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 511 Query: 65 accaac 70 |||||| Sbjct: 512 accaac 517
>dbj|AK134691.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330525E15 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1829 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 617 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 659
>dbj|AK167599.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530024J05 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1877 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 667 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 709 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 441 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 500 Query: 65 accaac 70 |||||| Sbjct: 501 accaac 506
>dbj|AK172328.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201H23 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1580 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 624 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 666 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 398 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 457 Query: 65 accaac 70 |||||| Sbjct: 458 accaac 463
>dbj|AK159832.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032F05 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 667 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 709 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 441 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 500 Query: 65 accaac 70 |||||| Sbjct: 501 accaac 506
>dbj|AK170540.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107G03 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1642 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 687 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 729 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 461 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 520 Query: 65 accaac 70 |||||| Sbjct: 521 accaac 526
>gb|BC027378.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone IMAGE:4951081), partial cds Length = 1528 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 439 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 481 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 213 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 272 Query: 65 accaac 70 |||||| Sbjct: 273 accaac 278
>dbj|AK089199.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630036C17 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1943 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 732 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 774 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 452 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 511 Query: 65 accaac 70 |||||| Sbjct: 512 accaac 517
>emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chromosome 11, complete sequence Length = 168981 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 231 tcttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 127732 tcttcatggagacgtctgccaagactgcaatgaacgtgaatga 127690 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Minus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 129414 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 129355 Query: 65 accaac 70 |||||| Sbjct: 129354 accaac 129349
>ref|NM_001034743.1| Bos taurus RAB5C, member RAS oncogene family isoform b (RAB5C), mRNA Length = 1045 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| ||||| |||||| Sbjct: 433 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctacgacatc 492 Query: 65 accaac 70 |||||| Sbjct: 493 accaac 498
>gb|BT021518.1| Bos taurus RAB5C, member RAS oncogene family (RAB5C), mRNA, complete cds Length = 1045 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| ||||||||||| || || ||| || |||||||| ||||| |||||| Sbjct: 433 cacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtctacgacatc 492 Query: 65 accaac 70 |||||| Sbjct: 493 accaac 498
>gb|BC047803.1| Danio rerio RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:56009 IMAGE:3819814), complete cds Length = 2408 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| |||||||||||| | || ||| |||||||| || || |||||| Sbjct: 441 taccacagtctggcccccatgtactacagaggtgcccaggccgccattgtagtttatgac 500 Query: 62 atcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttca 114 |||||||| | || || ||| || | |||||||| |||||| |||| ||||| Sbjct: 501 atcaccaatgaggagtcatttgcaagagcaaagaactgggttaaagagcttca 553
>gb|BC063966.1| Danio rerio RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:77676 IMAGE:6997315), complete cds Length = 1858 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| |||||||||||| | || ||| |||||||| || || |||||| Sbjct: 436 taccacagtctggcccccatgtactacagaggtgcccaggccgccattgtagtttatgac 495 Query: 62 atcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttca 114 |||||||| | || || ||| || | |||||||| |||||| |||| ||||| Sbjct: 496 atcaccaatgaggagtcatttgcaagagcaaagaactgggttaaagagcttca 548
>ref|XM_697418.1| PREDICTED: Danio rerio hypothetical protein LOC554855 (LOC554855), mRNA Length = 2378 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| |||||||||||| | || ||| |||||||| || || |||||| Sbjct: 441 taccacagtctggcccccatgtactacagaggtgcccaggccgccattgtagtttatgac 500 Query: 62 atcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttca 114 |||||||| | || || ||| || | |||||||| |||||| |||| ||||| Sbjct: 501 atcaccaatgaggagtcatttgcaagagcaaagaactgggttaaagagcttca 553
>ref|NM_201485.1| Danio rerio RAB5A, member RAS oncogene family (rab5a), mRNA Length = 2408 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| |||||||||||| | || ||| |||||||| || || |||||| Sbjct: 441 taccacagtctggcccccatgtactacagaggtgcccaggccgccattgtagtttatgac 500 Query: 62 atcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaacttca 114 |||||||| | || || ||| || | |||||||| |||||| |||| ||||| Sbjct: 501 atcaccaatgaggagtcatttgcaagagcaaagaactgggttaaagagcttca 553
>gb|BT013315.1| Lycopersicon esculentum clone 135000F, mRNA sequence Length = 1546 Score = 48.1 bits (24), Expect = 0.038 Identities = 93/116 (80%) Strand = Plus / Plus Query: 51 tcgtctatgacatcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaac 110 |||||||||||||||||| | | | || ||| |||| |||||||||||||| |||||| Sbjct: 305 tcgtctatgacatcaccagcactgattcatttgcacgggcaaagaaatgggtgcaagaat 364 Query: 111 ttcaagcacaagggaatccaaacacagtaatggctcttgctgggaacaaggctgat 166 | || ||||| ||||| | | ||||||||||||||||| || ||||||||| Sbjct: 365 tgcagaagcaaggtaatccgattatggtaatggctcttgctggcaataaggctgat 420
>gb|BT012776.1| Lycopersicon esculentum clone 113755R, mRNA sequence Length = 1003 Score = 48.1 bits (24), Expect = 0.038 Identities = 93/116 (80%) Strand = Plus / Plus Query: 51 tcgtctatgacatcaccaacgcggcctcttttacacgtgcaaagaaatgggttcaagaac 110 |||||||||||||||||| | | | || ||| |||| |||||||||||||| |||||| Sbjct: 303 tcgtctatgacatcaccagcactgattcatttgcacgggcaaagaaatgggtgcaagaat 362 Query: 111 ttcaagcacaagggaatccaaacacagtaatggctcttgctgggaacaaggctgat 166 | || ||||| ||||| | | ||||||||||||||||| || ||||||||| Sbjct: 363 tgcagaagcaaggtaatccgattatggtaatggctcttgctggcaataaggctgat 418
>emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in linkage group 9, complete sequence Length = 183988 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 156322 taccacagcttggctcccatgtactaccgtgg 156291
>emb|X64941.1|NPGTPBPM N.plumbaginifolia mRNA for small GTP binding protein Length = 870 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Plus Query: 119 caagggaatccaaacacagtaatggctcttgctgggaacaaggctgat 166 ||||| ||||| |||| || |||||||||||||| |||||||||||| Sbjct: 331 caaggtaatcctaacatggtcatggctcttgctggcaacaaggctgat 378
>emb|BX323459.20| Zebrafish DNA sequence from clone DKEYP-27C11 in linkage group 6, complete sequence Length = 168538 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 11 ctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 ||||| |||||||||||| | ||| | || || |||||| |||||||||||||||| Sbjct: 143227 ctggctcccatgtactacagaggctctgctgcggccatcatcgtctatgacatcac 143172
>gb|BC066634.1| Danio rerio RAB5B, member RAS oncogene family, mRNA (cDNA clone MGC:76978 IMAGE:6525746), complete cds Length = 2364 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 396 taccacagcttggctcccatgtactaccgtgg 427
>ref|XM_703529.1| PREDICTED: Danio rerio similar to RAB5A member RAS oncogene family, transcript variant 2 (LOC573322), mRNA Length = 729 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 430 taccacagcttggctcccatgtactaccgtgg 461
>ref|XM_681894.1| PREDICTED: Danio rerio similar to RAB5A member RAS oncogene family, transcript variant 1 (LOC573322), mRNA Length = 684 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 385 taccacagcttggctcccatgtactaccgtgg 416
>ref|NM_212885.1| Danio rerio RAB5B, member RAS oncogene family (rab5b), mRNA Length = 2364 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 396 taccacagcttggctcccatgtactaccgtgg 427
>ref|NM_205719.2| Danio rerio RAB22A, member RAS oncogene family (rab22a), mRNA Length = 1652 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 11 ctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 ||||| |||||||||||| | ||| | || || |||||| |||||||||||||||| Sbjct: 450 ctggctcccatgtactacagaggctctgctgcggccatcatcgtctatgacatcac 505
>gb|BC094134.1| Xenopus laevis cDNA clone MGC:115056 IMAGE:6957039, complete cds Length = 1610 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 206 acttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccat 261 ||||| ||| |||| | ||| ||||| |||||||||||||||||||| || ||||| Sbjct: 560 acttatgcagaagacactggactcttattcatggaaacgtctgccaaaactgccat 615
>emb|BX950869.14| Zebrafish DNA sequence from clone CH211-1J13 in linkage group 19, complete sequence Length = 91362 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| |||||||||||| | || ||| |||||||| || || |||||| Sbjct: 52102 taccacagtctggcccccatgtactacagaggtgcccaggccgccattgtagtttatgac 52161 Query: 62 atcaccaa 69 |||||||| Sbjct: 52162 atcaccaa 52169
>emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 in linkage group 9, complete sequence Length = 211682 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtgg 33 ||||||||| |||| ||||||||||||||||| Sbjct: 207722 taccacagcttggctcccatgtactaccgtgg 207753
>gb|BC085393.1| Danio rerio RAB22A, member RAS oncogene family, mRNA (cDNA clone MGC:101631 IMAGE:7225498), complete cds Length = 1652 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 11 ctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 ||||| |||||||||||| | ||| | || || |||||| |||||||||||||||| Sbjct: 450 ctggctcccatgtactacagaggctctgctgcggccatcatcgtctatgacatcac 505
>gb|M94264.1|XELCDC25C Xenopus laevis cdc25 protein mRNA, complete cds Length = 2998 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 206 acttacgcacaagagaatgggctcttcttcatggaaacgtctgccaagacagccat 261 ||||| ||| |||| | ||| ||||| |||||||||||||||||||| || ||||| Sbjct: 1938 acttatgcagaagacactggactcttattcatggaaacgtctgccaaaactgccat 1993
>ref|NM_118084.2| Arabidopsis thaliana ARA7; GTP binding AT4G19640 (ARA7) mRNA, complete cds Length = 958 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 463 gcaaagaaatgggttcaggaactgcaggcacaagg 497
>ref|NM_001032303.2| Xenopus tropicalis RAB5B, member RAS oncogene family (LOC613071), mRNA Length = 1542 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 223 tgggctcttcttcatggaaacgtctgc 249 ||||||||| ||||||||||||||||| Sbjct: 510 tgggctcttattcatggaaacgtctgc 536
>gb|BC091014.1| Xenopus tropicalis MGC107830 protein, mRNA (cDNA clone MGC:107830 IMAGE:7021699), complete cds Length = 1551 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 223 tgggctcttcttcatggaaacgtctgc 249 ||||||||| ||||||||||||||||| Sbjct: 514 tgggctcttattcatggaaacgtctgc 540
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 31681 cgccgccgccgccatcgtcgtct 31703
>gb|AY063095.1| Arabidopsis thaliana putative small GTP-binding protein (At4g19640) mRNA, complete cds Length = 634 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 301 gcaaagaaatgggttcaggaactgcaggcacaagg 335
>ref|NM_001030405.1| Xenopus tropicalis MGC107830 protein (MGC107830), mRNA Length = 1551 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 223 tgggctcttcttcatggaaacgtctgc 249 ||||||||| ||||||||||||||||| Sbjct: 514 tgggctcttattcatggaaacgtctgc 540
>gb|AF370309.1| Arabidopsis thaliana putative small GTP-binding protein (At4g19640) mRNA, complete cds Length = 918 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 427 gcaaagaaatgggttcaggaactgcaggcacaagg 461
>emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 51 Length = 197114 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 78319 gcaaagaaatgggttcaggaactgcaggcacaagg 78285
>emb|AL021768.1|ATF24J7 Arabidopsis thaliana DNA chromosome 4, BAC clone F24J7 (ESSA project) Length = 86554 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 80959 gcaaagaaatgggttcaggaactgcaggcacaagg 80925
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 77386 cgccgccgccgccatcgtcgtct 77364
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 127851 cgccgccgccgccatcgtcgtct 127829
>gb|AY052670.1| Arabidopsis thaliana AT4g19640/F24J7_190 mRNA, complete cds Length = 956 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 463 gcaaagaaatgggttcaggaactgcaggcacaagg 497
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 8872779 cgccgccgccgccatcgtcgtct 8872757 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 15043373 cgccgccgccgccatcgtcgtc 15043352 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 2893028 cgccgccgccgccatcgtcgtc 2893049
>ref|XM_345479.2| PREDICTED: Rattus norvegicus RAB22A, member RAS oncogene family (predicted) (Rab22a_predicted), mRNA Length = 984 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 12 tggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 |||| |||||||||||||| || | || || |||||| |||||||||||||||| Sbjct: 446 tggcacccatgtactaccgagggtcagcagcagccatcatcgtctatgacatcac 500
>dbj|AK119350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-F02, full insert sequence Length = 2839 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 117 cgccgccgccgccatcgtcgtct 95
>emb|CR760935.2| Xenopus tropicalis finished cDNA, clone TEgg089a05 Length = 1542 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 223 tgggctcttcttcatggaaacgtctgc 249 ||||||||| ||||||||||||||||| Sbjct: 510 tgggctcttattcatggaaacgtctgc 536
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtct 56 ||||||||||||||||||||||| Sbjct: 8877918 cgccgccgccgccatcgtcgtct 8877896 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 15051614 cgccgccgccgccatcgtcgtc 15051593 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 2892979 cgccgccgccgccatcgtcgtc 2893000
>dbj|AB038491.1| Arabidopsis thaliana mRNA for Ara7, complete cds Length = 603 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 gcaaagaaatgggttcaagaacttcaagcacaagg 123 ||||||||||||||||| ||||| || |||||||| Sbjct: 301 gcaaagaaatgggttcaggaactgcaggcacaagg 335
>ref|NM_194851.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBb0016M10.9), mRNA Length = 1662 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 544 cgccgccgccgccatcgtcgtc 523
>ref|XM_519779.1| PREDICTED: Pan troglodytes similar to RAB2, member RAS oncogene family; small GTP binding protein RAB2A (LOC464197), mRNA Length = 886 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 497 atggactcatcttcatggaaacgtctgctaagac 530
>ref|XM_466697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 956 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 197 cgccgccgccgccatcgtcgtc 176
>ref|XM_463876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2694 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 216 cgccgccgccgccatcgtcgtc 237
>ref|NM_002865.1| Homo sapiens RAB2, member RAS oncogene family (RAB2), mRNA Length = 1148 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 630 atggactcatcttcatggaaacgtctgctaagac 663
>gb|BT019695.1| Homo sapiens RAB2, member RAS oncogene family mRNA, complete cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>gb|BT019694.1| Synthetic construct Homo sapiens RAB2, member RAS oncogene family mRNA, partial cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>gb|BT019693.1| Synthetic construct Homo sapiens RAB2, member RAS oncogene family mRNA, partial cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19, complete sequence Length = 153276 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 101992 cgccgccgccgccatcgtcgtc 101971
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 34624 cgccgccgccgccatcgtcgtc 34603
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 135085 cgccgccgccgccatcgtcgtc 135064
>gb|BC008929.2| Homo sapiens RAB2, member RAS oncogene family, mRNA (cDNA clone MGC:1656 IMAGE:2966694), complete cds Length = 1013 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 610 atggactcatcttcatggaaacgtctgctaagac 643
>gb|AY239490.1| Sundasciurus philippinensis C-myc (c-myc) gene, exon 2 and partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gccgccgccgccatcgtcgtct 56 |||||||||||||||||||||| Sbjct: 241 gccgccgccgccatcgtcgtct 220
>emb|CR724508.1|CNS0GLZ6 Tetraodon nigroviridis full-length cDNA Length = 646 Score = 44.1 bits (22), Expect = 0.60 Identities = 58/70 (82%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgac 61 |||||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||| ||| Sbjct: 483 taccacagtctggctcctatgtattaccgaggcgcgcaggccgccatcgtggtctacgac 542 Query: 62 atcaccaacg 71 ||||| |||| Sbjct: 543 atcacaaacg 552
>emb|BX052473.1|CNS09CNH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 685 gtaccacagtttggcgcccatgtactaccg 656
>emb|BX052472.1|CNS09CNG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1001 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 595 gtaccacagtttggcgcccatgtactaccg 624
>emb|BX032716.1|CNS08XEO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 361 gtaccacagtttggcgcccatgtactaccg 390
>emb|BX028734.1|CNS08UC2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 756 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 680 gtaccacagtttggcgcccatgtactaccg 651
>emb|BX028733.1|CNS08UC1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 532 gtaccacagtttggcgcccatgtactaccg 561
>emb|BX020822.1|CNS08O8A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 516 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 231 gtaccacagtttggcgcccatgtactaccg 260
>emb|X12953.1|HSRAB2 Human rab2 mRNA, YPT1-related and member of ras family Length = 1148 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 630 atggactcatcttcatggaaacgtctgctaagac 663
>emb|CR860575.1| Pongo pygmaeus mRNA; cDNA DKFZp459F037 (from clone DKFZp459F037) Length = 3231 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 674 atggactcatcttcatggaaacgtctgctaagac 707
>emb|CR605346.1| full-length cDNA clone CS0DI077YH13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1612 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 427 atggactcatcttcatggaaacgtctgctaagac 460
>gb|AF498930.1| Homo sapiens small GTP binding protein RAB2A (RAB2A) mRNA, complete cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 74060 cgccgccgccgccatcgtcgtc 74081
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 117023 cgccgccgccgccatcgtcgtc 117002
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 638 attatatattttttatattcaa 659 |||||||||||||||||||||| Sbjct: 15840054 attatatattttttatattcaa 15840075 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ccgccgccgccatcgtcgtc 55 |||||||||||||||||||| Sbjct: 6719283 ccgccgccgccatcgtcgtc 6719264 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcg 53 |||||||||||||||||||| Sbjct: 377848 cgccgccgccgccatcgtcg 377829
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 517225 cgccgccgccgccatcgtcgtc 517204 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtctatgac 61 ||||||||||||| ||||||||| |||| Sbjct: 25710848 cgccgccgccgccgtcgtcgtctttgac 25710875 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 accgtggcgccgccgccgcc 46 |||||||||||||||||||| Sbjct: 21001036 accgtggcgccgccgccgcc 21001055
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 24172271 cgccgccgccgccatcgtcgtc 24172292 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 869078 cgccgccgccgccatcgtcgtc 869057 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ggcgccgccgccgccatcgtcgtc 55 |||||||||||||||| ||||||| Sbjct: 19769768 ggcgccgccgccgccaccgtcgtc 19769791 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 accgtggcgccgccgccgcc 46 |||||||||||||||||||| Sbjct: 2639861 accgtggcgccgccgccgcc 2639880
>gb|AC068389.10| Homo sapiens chromosome 8, clone RP11-91I20, complete sequence Length = 171515 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 83138 atggactcatcttcatggaaacgtctgctaagac 83105
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 115636 cgccgccgccgccatcgtcgtc 115657
>ref|XM_213463.3| PREDICTED: Rattus norvegicus RAB5C, member RAS oncogene family (predicted) (Rab5c_predicted), mRNA Length = 1878 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 5 cacagcctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatc 64 ||||||||||| || |||||||| || || ||| || ||||| || |||||||||||| Sbjct: 449 cacagcctggccccgatgtactatcggggggcccaagcagccattgtggtctatgacatc 508 Query: 65 accaac 70 |||||| Sbjct: 509 accaac 514
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 78286 cgccgccgccgccatcgtcgtc 78265
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 131012 cgccgccgccgccatcgtcgtc 131033
>gb|AY888662.1| Synthetic construct Homo sapiens clone FLH010119.01X RAB2 member RAS oncogene family (RAB2) mRNA, complete cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 638 attatatattttttatattcaa 659 |||||||||||||||||||||| Sbjct: 20097 attatatattttttatattcaa 20118
>gb|AY891306.1| Synthetic construct Homo sapiens clone FLH010115.01L RAB2 member RAS oncogene family (RAB2) mRNA, partial cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>gb|AY891305.1| Synthetic construct Homo sapiens clone FLH010114.01L RAB2 member RAS oncogene family (RAB2) mRNA, partial cds Length = 639 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 422 atggactcatcttcatggaaacgtctgctaagac 455
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 638 attatatattttttatattcaa 659 |||||||||||||||||||||| Sbjct: 154510 attatatattttttatattcaa 154531
>ref|XM_555603.1| Anopheles gambiae str. PEST ENSANGP00000027173 (ENSANGG00000007604), partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 351 gtaccacagtttggcgcccatgtactaccg 380
>ref|XM_317586.2| Anopheles gambiae str. PEST ENSANGP00000023894 (ENSANGG00000007604), partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 351 gtaccacagtttggcgcccatgtactaccg 380
>ref|XM_317587.2| Anopheles gambiae str. PEST ENSANGP00000023388 (ENSANGG00000007604), partial mRNA Length = 890 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 506 gtaccacagtttggcgcccatgtactaccg 535
>ref|XM_317584.2| Anopheles gambiae str. PEST ENSANGP00000022645 (ENSANGG00000007604), partial mRNA Length = 916 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 532 gtaccacagtttggcgcccatgtactaccg 561
>ref|XM_317588.2| Anopheles gambiae str. PEST ENSANGP00000010093 (ENSANGG00000007604), partial mRNA Length = 966 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 582 gtaccacagtttggcgcccatgtactaccg 611
>ref|XM_317585.2| Anopheles gambiae str. PEST ENSANGP00000022624 (ENSANGG00000007604), partial mRNA Length = 916 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gtaccacagcctggcgcccatgtactaccg 30 ||||||||| ||||||||||||||||||| Sbjct: 532 gtaccacagtttggcgcccatgtactaccg 561
>dbj|AK111313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-C05, full insert sequence Length = 1014 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 82 cgccgccgccgccatcgtcgtc 103
>dbj|AK072347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D10, full insert sequence Length = 2692 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 216 cgccgccgccgccatcgtcgtc 237
>dbj|AK071108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078B21, full insert sequence Length = 956 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 197 cgccgccgccgccatcgtcgtc 176
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 tggctcttgctgggaacaaggctgat 166 ||||||| |||||||||||||||||| Sbjct: 30829 tggctctggctgggaacaaggctgat 30854
>dbj|AK059787.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D10, full insert sequence Length = 961 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcgtc 55 |||||||||||||||||||||| Sbjct: 86 cgccgccgccgccatcgtcgtc 107
>gb|AF070629.1|AF070629 Homo sapiens clone 24484 RAB2 mRNA, partial cds Length = 1487 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 atgggctcttcttcatggaaacgtctgccaagac 255 |||| ||| ||||||||||||||||||| ||||| Sbjct: 141 atggactcatcttcatggaaacgtctgctaagac 174
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ggcgccgccgccgccatcgtcgtct 56 ||||||||| ||||||||||||||| Sbjct: 120872 ggcgccgccaccgccatcgtcgtct 120848
>gb|BC050558.1| Homo sapiens RAB5B, member RAS oncogene family, mRNA (cDNA clone IMAGE:6191566), partial cds Length = 3300 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 610 ttcatggagacttcagccaagacagctatgaacgtgaatga 650
>gb|BC072698.1| Rattus norvegicus RAB31, member RAS oncogene family, mRNA (cDNA clone MGC:91462 IMAGE:7105732), complete cds Length = 3335 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 10 cctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 |||||| |||||||| ||||| ||| | ||||| ||| || | |||||||||||||| Sbjct: 300 cctggctcccatgtattaccgaggctcggccgcagccgtcatagtctatgacatcac 356
>ref|NM_031718.1| Rattus norvegicus RAB2, member RAS oncogene family (Rab2), mRNA Length = 639 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 431 tcttcatggaaacttctgccaagac 455
>gb|BC040143.1| Homo sapiens RAB5B, member RAS oncogene family, mRNA (cDNA clone IMAGE:6046989), partial cds Length = 3297 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 633 ttcatggagacttcagccaagacagctatgaacgtgaatga 673
>ref|NM_145094.2| Rattus norvegicus RAB31, member RAS oncogene family (Rab31), mRNA Length = 3335 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 10 cctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 |||||| |||||||| ||||| ||| | ||||| ||| || | |||||||||||||| Sbjct: 300 cctggctcccatgtattaccgaggctcggccgcagccgtcatagtctatgacatcac 356
>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete sequence Length = 193718 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 attatatattttttatattca 658 ||||||||||||||||||||| Sbjct: 55014 attatatattttttatattca 54994
>gb|AC102438.8| Mus musculus chromosome 5, clone RP24-137F10, complete sequence Length = 205785 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 25250 tcttcatggaaacttctgccaagac 25274
>ref|XM_369726.1| Magnaporthe grisea 70-15 hypothetical protein (MG06241.4) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctggcgcccatgtactaccgt 31 ||||||||||||||||||||| Sbjct: 226 ctggcgcccatgtactaccgt 246
>gb|BC058382.1| Mus musculus RAB2, member RAS oncogene family, mRNA (cDNA clone MGC:66912 IMAGE:6820798), complete cds Length = 1042 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 648 tcttcatggaaacttctgccaagac 672
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 tcgcggggcagcaggcgcaga 323 ||||||||||||||||||||| Sbjct: 2154064 tcgcggggcagcaggcgcaga 2154084
>ref|NM_021518.2| Mus musculus RAB2, member RAS oncogene family (Rab2), mRNA Length = 2058 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 651 tcttcatggaaacttctgccaagac 675
>ref|NM_002868.2| Homo sapiens RAB5B, member RAS oncogene family (RAB5B), mRNA Length = 3336 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 630 ttcatggagacttcagccaagacagctatgaacgtgaatga 670
>gb|BC032740.1| Homo sapiens RAB5B, member RAS oncogene family, mRNA (cDNA clone MGC:45320 IMAGE:5538490), complete cds Length = 3274 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 603 ttcatggagacttcagccaagacagctatgaacgtgaatga 643
>gb|BC065298.1| Homo sapiens cDNA clone IMAGE:6146668, partial cds Length = 3281 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 588 ttcatggagacttcagccaagacagctatgaacgtgaatga 628
>ref|XR_002544.1| PREDICTED: Mus musculus hypothetical LOC545747 (LOC545747), mRNA Length = 1237 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 444 tcttcatggaaacttctgccaagac 468
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 cccagcttgctacactacagt 500 ||||||||||||||||||||| Sbjct: 32743 cccagcttgctacactacagt 32763
>ref|XM_852112.1| PREDICTED: Canis familiaris hypothetical protein LOC607144 (LOC607144), mRNA Length = 564 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 taccgtggcgccgccgccgcc 46 ||||||||||||||||||||| Sbjct: 359 taccgtggcgccgccgccgcc 339
>ref|XM_762937.1| Giardia lamblia ATCC 50803 guanine nucleotide-binding protein (rab2) partial mRNA Length = 645 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 227 ctcttcttcatggaaacgtctgccaagac 255 ||||||||||| || |||||||||||||| Sbjct: 436 ctcttcttcattgagacgtctgccaagac 464
>ref|XM_764145.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_305_27064_29193) partial mRNA Length = 2130 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gaaacgtctgccaagacagccatca 263 ||||| ||||||||||||||||||| Sbjct: 1564 gaaacctctgccaagacagccatca 1588
>ref|XM_673008.1| Plasmodium berghei strain ANKA hypothetical protein (PB001093.01.0) partial mRNA Length = 1776 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 637 gattatatattttttatattcaatg 661 ||||||||||||| ||||||||||| Sbjct: 975 gattatatattttatatattcaatg 999
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 118246 gccgccgccgccatcgtcgtc 118266
>emb|X63875.1|NTRAB5 N.tabacum SR1 mRNA Nt-rab5 Length = 712 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 cacgtgcaaagaaatgggttcaaga 108 |||| |||||||||||||||||||| Sbjct: 394 cacgagcaaagaaatgggttcaaga 418
>gb|BC056422.1| Homo sapiens RAB5B, member RAS oncogene family, mRNA (cDNA clone IMAGE:6151079), partial cds Length = 3273 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 585 ttcatggagacttcagccaagacagctatgaacgtgaatga 625
>emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chromosome 9 Contains part of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 164008 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 cttgtttcttgtcatatgttg 527 ||||||||||||||||||||| Sbjct: 85187 cttgtttcttgtcatatgttg 85207
>ref|XM_782786.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC582848 (LOC582848), mRNA Length = 2754 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 attatatattttttatattca 658 ||||||||||||||||||||| Sbjct: 2672 attatatattttttatattca 2692
>emb|X95403.1|MMRAB2 M.musculus mRNA for GTP-binding protein Length = 1008 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 638 tcttcatggaaacttctgccaagac 662
>emb|X54871.1|HSRAB5B H.sapiens mRNA for ras-related protein Rab5b Length = 1630 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 495 ttcatggagacttcagccaagacagctatgaacgtgaatga 535
>emb|BX537408.1|HSM805707 Homo sapiens mRNA; cDNA DKFZp686F0652 (from clone DKFZp686F0652); complete cds Length = 3336 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 630 ttcatggagacttcagccaagacagctatgaacgtgaatga 670
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 tcgcggggcagcaggcgcaga 323 ||||||||||||||||||||| Sbjct: 315692 tcgcggggcagcaggcgcaga 315712
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tgtggacgattgctgccatcccagc 485 |||||||||||||||||||| |||| Sbjct: 173760 tgtggacgattgctgccatcgcagc 173736
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 ttatatattttttatattcaa 659 ||||||||||||||||||||| Sbjct: 118514 ttatatattttttatattcaa 118494
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ggcgccgccgccgccatcgtcgtct 56 |||||||||| |||||||||||||| Sbjct: 5255 ggcgccgccggcgccatcgtcgtct 5279
>emb|AJ721020.1| Gallus gallus mRNA for hypothetical protein, clone 32j11 Length = 1090 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccg 30 |||||||| ||||| |||||||||||||| Sbjct: 389 taccacagtctggcccccatgtactaccg 417
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 8672 gccgccgccgccatcgtcgtc 8692
>gb|AF498937.1| Homo sapiens small GTP binding protein RAB5B (RAB5B) mRNA, complete cds Length = 648 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 475 ttcatggagacttcagccaagacagctatgaacgtgaatga 515
>dbj|AK135421.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820418A20 product:RAB2, member RAS oncogene family, full insert sequence Length = 2050 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 634 tcttcatggaaacttctgccaagac 658
>dbj|AK150030.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530122I07 product:RAB2, member RAS oncogene family, full insert sequence Length = 2098 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 682 tcttcatggaaacttctgccaagac 706
>dbj|AK146179.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730030F23 product:RAB2, member RAS oncogene family, full insert sequence Length = 2228 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 635 tcttcatggaaacttctgccaagac 659
>dbj|AK160333.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330148M11 product:RAB2, member RAS oncogene family, full insert sequence Length = 2058 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 651 tcttcatggaaacttctgccaagac 675
>dbj|AK163320.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020013L22 product:RAB2, member RAS oncogene family, full insert sequence Length = 1619 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 633 tcttcatggaaacttctgccaagac 657
>dbj|AK159607.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025J15 product:RAB2, member RAS oncogene family, full insert sequence Length = 2078 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 671 tcttcatggaaacttctgccaagac 695
>emb|CR541690.1| Homo sapiens full open reading frame cDNA clone RZPDo834D1028D for gene RAB5B, RAB5B, member RAS oncogene family; complete cds, without stopcodon Length = 645 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 475 ttcatggagacttcagccaagacagctatgaacgtgaatga 515
>emb|CR536482.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0320D for gene RAB5B, RAB5B, member RAS oncogene family; complete cds, incl. stopcodon Length = 648 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 475 ttcatggagacttcagccaagacagctatgaacgtgaatga 515
>dbj|AB169319.1| Macaca fascicularis testis cDNA, clone: QtsA-19013, similar to human RAB2, member RAS oncogene family (RAB2), mRNA, RefSeq: NM_002865.1 Length = 2110 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||||||||| ||||| Sbjct: 653 tcttcatggaaacgtctgctaagac 677
>dbj|AB169768.1| Macaca fascicularis brain cDNA, clone: QtrA-12017, similar to human RAB2, member RAS oncogene family (RAB2), mRNA, RefSeq: NM_002865.1 Length = 2126 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||||||||| ||||| Sbjct: 656 tcttcatggaaacgtctgctaagac 680
>emb|CR388793.1| Gallus gallus finished cDNA, clone ChEST518p6 Length = 669 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 taccacagcctggcgcccatgtactaccg 30 |||||||| ||||| |||||||||||||| Sbjct: 354 taccacagtctggcccccatgtactaccg 382
>dbj|AK042862.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730032B13 product:RAB2, member RAS oncogene family, full insert sequence Length = 2103 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 620 tcttcatggaaacttctgccaagac 644
>dbj|AK079071.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330148H14 product:RAS-RELATED PROTEIN RAB-2 homolog [Rattus norvegicus], full insert sequence Length = 2058 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 651 tcttcatggaaacttctgccaagac 675
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 tcgcggggcagcaggcgcaga 323 ||||||||||||||||||||| Sbjct: 2008953 tcgcggggcagcaggcgcaga 2008933
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 ttatatattttttatattcaa 659 ||||||||||||||||||||| Sbjct: 22781318 ttatatattttttatattcaa 22781298 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcg 53 |||||||||||||||||||| Sbjct: 18888360 cgccgccgccgccatcgtcg 18888379 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcg 53 |||||||||||||||||||| Sbjct: 15069668 cgccgccgccgccatcgtcg 15069649 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 cgccgccgccgccatcgtcg 53 |||||||||||||||||||| Sbjct: 14317278 cgccgccgccgccatcgtcg 14317297 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 cgccgccgccgccatcgtcg 53 |||||||||||||||||||| Sbjct: 3988603 cgccgccgccgccatcgtcg 3988584
>gb|AC034102.32| Homo sapiens 12 BAC RP11-603J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192203 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 169903 ttcatggagacttcagccaagacagctatgaacgtgaatga 169863
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 141722 gccgccgccgccatcgtcgtc 141742
>ref|XM_226078.3| PREDICTED: Rattus norvegicus similar to hypothetical protein 2610304F09 (predicted) (LOC307527), mRNA Length = 3540 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 aggatgcttggccgtggagag 419 ||||||||||||||||||||| Sbjct: 2300 aggatgcttggccgtggagag 2280
>dbj|AK216186.1| Mus musculus cDNA, clone:Y2G0137I01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060232, based on BLAT search Length = 333 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 154 tcttcatggaaacttctgccaagac 178
>dbj|AK212917.1| Mus musculus cDNA, clone:Y2G0126I18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060232, based on BLAT search Length = 355 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 176 tcttcatggaaacttctgccaagac 200
>gb|AF254800.1|AF254800 Rattus norvegicus GTP-binding protein Rab0 mRNA, complete cds Length = 707 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 10 cctggcgcccatgtactaccgtggcgccgccgccgccatcgtcgtctatgacatcac 66 |||||| |||||||| ||||| ||| | ||||| ||| || | |||||||||||||| Sbjct: 249 cctggctcccatgtattaccgaggctcggccgcagccgtcatagtctatgacatcac 305
>dbj|AK208722.1| Mus musculus cDNA, clone:Y2G0112I19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060232, based on BLAT search Length = 333 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 154 tcttcatggaaacttctgccaagac 178
>dbj|AK184956.1| Mus musculus cDNA, clone:Y0G0132B16, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060232, based on BLAT search Length = 335 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 155 tcttcatggaaacttctgccaagac 179
>dbj|AK181047.1| Mus musculus cDNA, clone:Y0G0116M03, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060232, based on BLAT search Length = 333 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 tcttcatggaaacgtctgccaagac 255 ||||||||||||| ||||||||||| Sbjct: 154 tcttcatggaaacttctgccaagac 178
>emb|BX647808.1|HSM807954 Homo sapiens mRNA; cDNA DKFZp686L1896 (from clone DKFZp686L1896) Length = 3163 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 482 ttcatggagacttcagccaagacagctatgaacgtgaatga 522
>emb|X59138.1|ZMR28DNA Z.mays rab28 gene Length = 1846 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 889 gccgccgccgccatcgtcgtc 869
>gb|AY893731.1| Synthetic construct Homo sapiens clone FLH131054.01L RAB5B member RAS oncogene family (RAB5B) mRNA, partial cds Length = 648 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 ttcatggaaacgtctgccaagacagccatcaacgtgaatga 273 |||||||| || || ||||||||||| || ||||||||||| Sbjct: 475 ttcatggagacttcagccaagacagctatgaacgtgaatga 515
>dbj|AK104959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C01, full insert sequence Length = 1742 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ggcgccgccgccgccatcgtcgtct 56 ||||||||| ||||||||||||||| Sbjct: 220 ggcgccgccaccgccatcgtcgtct 196
>dbj|AK072029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105G11, full insert sequence Length = 1745 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ggcgccgccgccgccatcgtcgtct 56 ||||||||| ||||||||||||||| Sbjct: 218 ggcgccgccaccgccatcgtcgtct 194
>dbj|AK070370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F22, full insert sequence Length = 1881 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gccgccgccgccatcgtcgtc 55 ||||||||||||||||||||| Sbjct: 394 gccgccgccgccatcgtcgtc 374 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,341,275 Number of Sequences: 3902068 Number of extensions: 7341275 Number of successful extensions: 212584 Number of sequences better than 10.0: 385 Number of HSP's better than 10.0 without gapping: 399 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 203748 Number of HSP's gapped (non-prelim): 8759 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)