| Clone Name | bags10a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 515 bits (260), Expect = e-143 Identities = 426/480 (88%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 260 |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 261 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 320 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 321 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 380 ||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaaca 394 Query: 381 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 440 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 441 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 500 |||||||||||||| | |||||||| |||||||| |||| |||||||||||||||||||| Sbjct: 455 acttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaag 514 Query: 501 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 560 | |||||||||||||| || ||||||||||||||||||||||| ||||| ||||| || | Sbjct: 515 cttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttcta 574 Query: 561 gttttacggttgctatgaagcttgctcctaacaaagataaatttatgggaggtaattagc 620 ||||||| || || ||||||||||||||||| | ||| |||||||| |||||| ||||| Sbjct: 575 gttttacagtggcaatgaagcttgctcctaatagagagaaatttat-ggaggtcattagt 633 Query: 621 ggaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctc 680 |||||||||||||| ||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 634 ggaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctc 693
>dbj|AK061679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H10, full insert sequence Length = 978 Score = 507 bits (256), Expect = e-140 Identities = 425/480 (88%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 260 |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 261 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 320 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 321 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 380 ||||||||||| ||||||||||||| ||||||| |||||| || ||||| | | |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggctcaaaaca 394 Query: 381 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 440 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 441 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 500 |||||||||||||| | |||||||| |||||||| |||| |||||||||||||||||||| Sbjct: 455 acttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaag 514 Query: 501 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 560 | |||||||||||||| || ||||||||||||||||||||||| ||||| ||||| || | Sbjct: 515 cttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttcta 574 Query: 561 gttttacggttgctatgaagcttgctcctaacaaagataaatttatgggaggtaattagc 620 ||||||| || || ||||||||||||||||| | ||| |||||||| |||||| ||||| Sbjct: 575 gttttacagtggcaatgaagcttgctcctaatagagagaaatttat-ggaggtcattagt 633 Query: 621 ggaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctc 680 |||||||||||||| ||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 634 ggaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctc 693
>gb|BT024039.1| Zea mays clone EL01N0429A01 mRNA sequence Length = 807 Score = 436 bits (220), Expect = e-119 Identities = 416/480 (86%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 260 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| Sbjct: 28 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcctggataaatttggagctg 87 Query: 261 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 320 ||||||||||||| |||| |||||| | || |||||||| ||| |||| |||||||| | Sbjct: 88 ctatggcaattgtaaagaatgatatcagcggcaatatcacaaggctggaaaacaagtatt 147 Query: 321 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 380 ||||||| ||| |||| |||| |||||||||| |||||| || ||||||||| |||| | Sbjct: 148 cttcagatccatcaaagtatggacacttgtacagcatggttcaggaagaagttcaaaaca 207 Query: 381 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 440 ||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 208 agaccgcgaaaggttcctcaagctgcacaaatggtcttctgtggctcacgagggccatgg 267 Query: 441 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 500 | ||||||||||| |||||||||| |||||||| |||||||||||||| |||| ||||| Sbjct: 268 atttccttgttgagttgttccgtaacctgcttgagcatccagactggaccatgactcaag 327 Query: 501 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 560 | || |||||||||||||| || || |||||||||| ||||||||||| ||||| || | Sbjct: 328 cttgcactgattcatacaccaagaccctgaagaaatttcatggctggcttgccagttcta 387 Query: 561 gttttacggttgctatgaagcttgctcctaacaaagataaatttatgggaggtaattagc 620 |||||||||| || |||||||| ||||||| | ||||||||| || |||||| ||||| Sbjct: 388 gttttacggtggccatgaagctctctcctaatagagataaattcat-ggaggtcattagt 446 Query: 621 ggaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctc 680 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| | ||| |||||| Sbjct: 447 ggaactggtgatatcaatgcagatattgagaaattttgcacaaccttctctccttttctc 506
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 431 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 490 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 24801074 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 24801133 Query: 491 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 550 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 24801134 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 24801193 Query: 551 gccagctccagttttacggttg 572 ||||| || |||||||| |||| Sbjct: 24801194 gccagttctagttttacagttg 24801215 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 320 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 379 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 24800882 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 24800941 Query: 380 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 433 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 24800942 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 24800995 Score = 99.6 bits (50), Expect = 1e-17 Identities = 93/106 (87%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 575 atgaagcttgctcctaacaaagataaatttatgggaggtaattagcggaacgggtgacat 634 ||||||||||||||||| | ||| |||||||||| |||| ||||| |||||||||||||| Sbjct: 24801632 atgaagcttgctcctaatagagagaaatttatgg-aggtcattagtggaacgggtgacat 24801690 Query: 635 caaagcagacattgagaaattctgcaccaccttttatccctttctc 680 ||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 24801691 aaaagctgatatcgagaaattctgcacgaccttttacccttttctc 24801736 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 301 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 24800596 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 24800652 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 245 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 24800032 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 24800076 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ctaacaaagataaatttatg 607 |||||||||||||||||||| Sbjct: 30753996 ctaacaaagataaatttatg 30753977
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 431 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 490 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 100722 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 100781 Query: 491 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 550 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 100782 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 100841 Query: 551 gccagctccagttttacggttg 572 ||||| || |||||||| |||| Sbjct: 100842 gccagttctagttttacagttg 100863 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 320 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 379 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 100530 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 100589 Query: 380 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 433 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 100590 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 100643 Score = 99.6 bits (50), Expect = 1e-17 Identities = 93/106 (87%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 575 atgaagcttgctcctaacaaagataaatttatgggaggtaattagcggaacgggtgacat 634 ||||||||||||||||| | ||| |||||||||| |||| ||||| |||||||||||||| Sbjct: 101280 atgaagcttgctcctaatagagagaaatttatgg-aggtcattagtggaacgggtgacat 101338 Query: 635 caaagcagacattgagaaattctgcaccaccttttatccctttctc 680 ||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 101339 aaaagctgatatcgagaaattctgcacgaccttttacccttttctc 101384 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 301 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 100244 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 100300 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 245 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 99680 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 99724
>dbj|AP006846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08 Length = 38265 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 431 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 490 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 4438 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 4497 Query: 491 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 550 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 4498 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 4557 Query: 551 gccagctccagttttacggttg 572 ||||| || |||||||| |||| Sbjct: 4558 gccagttctagttttacagttg 4579 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 320 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 379 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 4246 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 4305 Query: 380 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 433 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 4306 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 4359 Score = 99.6 bits (50), Expect = 1e-17 Identities = 93/106 (87%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 575 atgaagcttgctcctaacaaagataaatttatgggaggtaattagcggaacgggtgacat 634 ||||||||||||||||| | ||| |||||||||| |||| ||||| |||||||||||||| Sbjct: 4996 atgaagcttgctcctaatagagagaaatttatgg-aggtcattagtggaacgggtgacat 5054 Query: 635 caaagcagacattgagaaattctgcaccaccttttatccctttctc 680 ||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 5055 aaaagctgatatcgagaaattctgcacgaccttttacccttttctc 5100 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 301 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 3960 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 4016 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 201 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 245 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 3396 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 3440
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 302 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 16231165 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 16231108
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 302 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 21343 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 21286
>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full insert sequence Length = 2519 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 302 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 1837 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 1894
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 301 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 21531134 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 21531190 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gctgctatggcaattgtgaagagtg 281 |||||||||||| |||||||||||| Sbjct: 13742624 gctgctatggcacttgtgaagagtg 13742600
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 245 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 301 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 88318 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 88374
>ref|NM_201859.1| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.2 mRNA, complete cds Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 443 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 502 Query: 557 tc 558 || Sbjct: 503 tc 504
>ref|NM_128907.2| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.1 mRNA, complete cds Length = 981 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 559 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 618 Query: 557 tc 558 || Sbjct: 619 tc 620
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 80885 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 80826 Query: 557 tc 558 || Sbjct: 80825 tc 80824
>gb|BT005674.1| Arabidopsis thaliana clone U50148 unknown protein (At2g33470) mRNA, complete cds Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 370 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 429 Query: 557 tc 558 || Sbjct: 430 tc 431
>gb|BT004207.1| Arabidopsis thaliana clone RAFL15-28-H11 (R50148) unknown protein (At2g33470) mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 463 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 522 Query: 557 tc 558 || Sbjct: 523 tc 524
>gb|AY085884.1| Arabidopsis thaliana clone 19302 mRNA, complete sequence Length = 945 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 556 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 557 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 616 Query: 557 tc 558 || Sbjct: 617 tc 618
>ref|NM_187035.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Plus Query: 521 aaaactctgaagaaatggcatggctggctcgccagctccagttttacggttgctatgaag 580 |||||||| ||||||||||| || ||||| || || || || ||| ||||||| || ||| Sbjct: 394 aaaactctcaagaaatggcacggatggctggcgagttcaagcttttcggttgccataaag 453 Query: 581 cttgctcc 588 |||||||| Sbjct: 454 cttgctcc 461 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 434 gccatggacttccttgttgaactgttccgtaat 466 |||||||||||||| |||| |||||||| |||| Sbjct: 307 gccatggacttcctggttgcactgttccataat 339
>ref|NM_179950.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G37420 mRNA, complete cds Length = 3429 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 caagaagaagttgaaaagaag 382 ||||||||||||||||||||| Sbjct: 1443 caagaagaagttgaaaagaag 1463
>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence Length = 202146 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tatgagcacttgtacaccatg 358 ||||||||||||||||||||| Sbjct: 98463 tatgagcacttgtacaccatg 98483
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gtccaagaagaagttgaaaag 379 ||||||||||||||||||||| Sbjct: 81861 gtccaagaagaagttgaaaag 81841
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gtccaagaagaagttgaaaag 379 ||||||||||||||||||||| Sbjct: 20135 gtccaagaagaagttgaaaag 20115
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 tggcaattgtgaagagtgata 284 ||||||||||||||||||||| Sbjct: 168018 tggcaattgtgaagagtgata 167998
>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains the 5' end of the FGF14 gene for fibroblast growth factor 14, a lipoyltransferase (LOC51601) pseudogene and a CpG island, complete sequence Length = 188696 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 tggcaattgtgaagagtgata 284 ||||||||||||||||||||| Sbjct: 18913 tggcaattgtgaagagtgata 18893
>emb|Z98754.1|HS63M23 Human DNA sequence from clone RP1-63M23 on chromosome Xq13.1-21.1, complete sequence Length = 130594 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 aacaaagataaatttatggga 610 ||||||||||||||||||||| Sbjct: 14269 aacaaagataaatttatggga 14289
>emb|AL356476.13| Human DNA sequence from clone RP11-655H13 on chromosome 10 Contains a mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5) pseudogene and a novel gene, complete sequence Length = 184510 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 tggactatgagtcaagcatgt 505 ||||||||||||||||||||| Sbjct: 154882 tggactatgagtcaagcatgt 154862
>emb|X71621.1|SCELM1AA S.cerevisiae genes ELM1 and PRI2 Length = 17564 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 12411 aagaagaagttgaaaagaaga 12391
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 497 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggct 549 ||||| ||||||||||| || | || ||||| ||||| |||||||||||||| Sbjct: 10298 caagcctgtactgattcctataacaagactctaaagaagtggcatggctggct 10350
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 aagaagttgaaaagaagaccg 386 ||||||||||||||||||||| Sbjct: 596182 aagaagttgaaaagaagaccg 596202
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 caagaagaagttgaaaagaag 382 ||||||||||||||||||||| Sbjct: 71403 caagaagaagttgaaaagaag 71423
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 434 gccatggacttccttgttgaactgttccgtaat 466 |||||||||||||| |||| |||||||| |||| Sbjct: 15168568 gccatggacttcctggttgcactgttccataat 15168600
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gctgctatggcaattgtgaagagtg 281 |||||||||||| |||||||||||| Sbjct: 149957 gctgctatggcacttgtgaagagtg 149933
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 434 gccatggacttccttgttgaactgttccgtaat 466 |||||||||||||| |||| |||||||| |||| Sbjct: 35317 gccatggacttcctggttgcactgttccataat 35349
>dbj|AK105492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C02, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gctgctatggcaattgtgaagagtg 281 |||||||||||| |||||||||||| Sbjct: 1469 gctgctatggcacttgtgaagagtg 1493
>emb|Z28044.1|SCYKL044W S.cerevisiae chromosome XI reading frame ORF YKL044w Length = 1668 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 1595 aagaagaagttgaaaagaaga 1575
>emb|Z28043.1|SCYKL043W S.cerevisiae chromosome XI reading frame ORF YKL043w Length = 1832 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 32 aagaagaagttgaaaagaaga 12
>gb|AY949948.1| Saccharomyces cerevisiae strain YPS610 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949947.1| Saccharomyces cerevisiae strain YPS608 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949946.1| Saccharomyces cerevisiae strain YPS606 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949945.1| Saccharomyces cerevisiae strain YPS604 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949944.1| Saccharomyces cerevisiae strain YPS602 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949943.1| Saccharomyces cerevisiae strain YPS600 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949942.1| Saccharomyces cerevisiae strain YPS598 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949941.1| Saccharomyces cerevisiae strain YPS400 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949940.1| Saccharomyces cerevisiae strain YPS396 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949939.1| Saccharomyces cerevisiae strain YPH499 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949938.1| Saccharomyces cerevisiae strain Sgu52F PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949937.1| Saccharomyces cerevisiae strain Sgu52E PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949936.1| Saccharomyces cerevisiae strain ORM1-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949935.1| Saccharomyces cerevisiae strain MMW1-15h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949934.1| Saccharomyces cerevisiae strain MMW1-15 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949933.1| Saccharomyces cerevisiae strain MMW1-12 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949932.1| Saccharomyces cerevisiae strain MMW1-2h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949931.1| Saccharomyces cerevisiae strain MMW1-2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949930.1| Saccharomyces cerevisiae strain MMR2-5 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949929.1| Saccharomyces cerevisiae strain MM@2-3 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949928.1| Saccharomyces cerevisiae strain MMR2-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949927.1| Saccharomyces cerevisiae strain M7-8D PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949926.1| Saccharomyces cerevisiae strain M5-7B PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949925.1| Saccharomyces cerevisiae strain M5-7A PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949924.1| Saccharomyces cerevisiae strain M2-8 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949923.1| Saccharomyces cerevisiae strain M1-2A PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949922.1| Saccharomyces cerevisiae strain Fy93,5a PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949921.1| Saccharomyces cerevisiae strain Bb32(5) PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949920.1| Saccharomyces cerevisiae strain Ba194 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|U05241.1|SCU05241 Saccharomyces cerevisiae strain YPH1 putative transcription factor Phd1p (PHD1) gene, complete cds Length = 2020 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaaga 383 ||||||||||||||||||||| Sbjct: 627 aagaagaagttgaaaagaaga 607
>ref|NM_119452.3| Arabidopsis thaliana ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor AT4G32980 (ATH1) mRNA, complete cds Length = 2268 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 345 aagaagaagttgaaaagaag 326
>ref|NM_113399.1| Arabidopsis thaliana DNA binding AT3G24870 mRNA, complete cds Length = 5526 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gaagaaatggcatggctggc 548 |||||||||||||||||||| Sbjct: 1726 gaagaaatggcatggctggc 1745
>ref|NM_113400.3| Arabidopsis thaliana DNA binding AT3G24880 mRNA, complete cds Length = 6089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gaagaaatggcatggctggc 548 |||||||||||||||||||| Sbjct: 1741 gaagaaatggcatggctggc 1760
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aattgtgaagagtgatattg 287 |||||||||||||||||||| Sbjct: 147038 aattgtgaagagtgatattg 147057
>gb|AC151368.3| Aotus nancymaae clone CH258-251O19, complete sequence Length = 189563 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttggaagggatgaaccatgtcag 177 |||||| ||||||||||||||||| Sbjct: 76264 tttggatgggatgaaccatgtcag 76287
>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence Length = 201427 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 ccatccagactggactatgagtca 498 ||||||| |||||||||||||||| Sbjct: 51021 ccatccacactggactatgagtca 51044
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttggaagggatgaaccatgtcag 177 |||||| ||||||||||||||||| Sbjct: 1565176 tttggatgggatgaaccatgtcag 1565199
>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the complete genome Length = 11851 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 agaagaagttgaaaagaaga 383 |||||||||||||||||||| Sbjct: 10472 agaagaagttgaaaagaaga 10453
>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence Length = 175150 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 caagaagaagttgaaaagaa 381 |||||||||||||||||||| Sbjct: 65724 caagaagaagttgaaaagaa 65743
>gb|AC130209.3| Mus musculus BAC clone RP24-369J19 from chromosome 6, complete sequence Length = 154867 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ggcagggcctctctcctgca 52 |||||||||||||||||||| Sbjct: 119843 ggcagggcctctctcctgca 119862
>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence Length = 150507 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ccatccagactggactatgagtca 498 ||||||| |||||||||||||||| Sbjct: 15063 ccatccacactggactatgagtca 15040
>ref|XM_646239.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (170.t00017) partial mRNA Length = 696 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 ctcctaacaaagataaattt 604 |||||||||||||||||||| Sbjct: 397 ctcctaacaaagataaattt 378
>ref|XM_646996.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (133.t00008) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 44 aagaagaagttgaaaagaag 63
>emb|CR730554.1|CNS0GQN3 Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 614 actggactatgagtcaagca 595
>emb|CR727607.2|CNS0GOD9 Tetraodon nigroviridis full-length cDNA Length = 1331 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 624 actggactatgagtcaagca 605
>emb|CR703130.2|CNS0G5HI Tetraodon nigroviridis full-length cDNA Length = 1008 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 546 actggactatgagtcaagca 527
>emb|CR687850.2|CNS0FTP2 Tetraodon nigroviridis full-length cDNA Length = 1120 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 673 actggactatgagtcaagca 654
>emb|CR684165.2|CNS0FQUP Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 244 actggactatgagtcaagca 225
>emb|CR661825.2|CNS0F9MV Tetraodon nigroviridis full-length cDNA Length = 1041 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 333 actggactatgagtcaagca 314
>emb|CR657762.1|CNS0F6I0 Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 600 actggactatgagtcaagca 581
>emb|CR642978.2|CNS0EV3C Tetraodon nigroviridis full-length cDNA Length = 1080 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 actggactatgagtcaagca 502 |||||||||||||||||||| Sbjct: 389 actggactatgagtcaagca 370
>gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203983 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ggcagggcctctctcctgca 52 |||||||||||||||||||| Sbjct: 56079 ggcagggcctctctcctgca 56098
>emb|AL008733.10|HS163G9 Human DNA sequence from clone RP1-163G9 on chromosome 1p36.2-36.3 Contains two novel genes, the 5' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 143291 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctctctcctgcagttccct 59 |||||||||||||||||||| Sbjct: 86427 cctctctcctgcagttccct 86446
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 atattggaggaaatatcacgaggt 305 ||||||||||||||||||| |||| Sbjct: 95288 atattggaggaaatatcacaaggt 95311
>emb|Z83320.1|ATZ83320 A.thaliana partial ATH1 gene Length = 10072 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 8560 aagaagaagttgaaaagaag 8541
>emb|X80127.1|ATHIGEN A.thaliana AtH1 gene Length = 4878 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 1654 aagaagaagttgaaaagaag 1635
>gb|AY072174.1| Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds Length = 2277 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 347 aagaagaagttgaaaagaag 328
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ccgcaaaaggttcatcaagc 403 |||||||||||||||||||| Sbjct: 1483808 ccgcaaaaggttcatcaagc 1483789
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 139456 aagaagaagttgaaaagaag 139475
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 48760 aagaagaagttgaaaagaag 48779
>gb|AC148057.3| Callicebus moloch clone LB5-121J11, complete sequence Length = 152135 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttggaagggatgaaccatgtcag 177 |||||| ||||||||||||||||| Sbjct: 46189 tttggatgggatgaaccatgtcag 46212
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 aggttcatcaagctgcacca 410 |||||||||||||||||||| Sbjct: 3543780 aggttcatcaagctgcacca 3543799
>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete sequence Length = 131417 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 taacaaagataaatttatgg 608 |||||||||||||||||||| Sbjct: 84879 taacaaagataaatttatgg 84860
>gb|AC146883.3| Callithrix jacchus clone CH259-225J7, complete sequence Length = 216802 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttggaagggatgaaccatgtcag 177 |||||| ||||||||||||||||| Sbjct: 36785 tttggatgggatgaaccatgtcag 36808
>emb|BX826894.1|CNS0A4MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2123 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aagaagaagttgaaaagaag 382 |||||||||||||||||||| Sbjct: 203 aagaagaagttgaaaagaag 184
>dbj|AP006346.1| Marsupenaeus japonicus mitochondrial DNA, complete genome Length = 15968 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gagtgatattggaggaaata 296 |||||||||||||||||||| Sbjct: 1182 gagtgatattggaggaaata 1163
>gb|AC084571.1|CBRG39J22 Caenorhabditis briggsae cosmid G39J22, complete sequence Length = 41637 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 atggtccaagaagaagttga 375 |||||||||||||||||||| Sbjct: 13773 atggtccaagaagaagttga 13754
>gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aattgtgaagagtgatattg 287 |||||||||||||||||||| Sbjct: 22516 aattgtgaagagtgatattg 22535
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ctaacaaagataaatttatg 607 |||||||||||||||||||| Sbjct: 94143 ctaacaaagataaatttatg 94124
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gaagaaatggcatggctggc 548 |||||||||||||||||||| Sbjct: 65064 gaagaaatggcatggctggc 65045 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gaagaaatggcatggctggc 548 |||||||||||||||||||| Sbjct: 53805 gaagaaatggcatggctggc 53786
>gb|AC155305.2| Mus musculus BAC clone RP24-182I21 from 12, complete sequence Length = 172724 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 taacaaagataaatttatgg 608 |||||||||||||||||||| Sbjct: 12054 taacaaagataaatttatgg 12035
>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence Length = 159591 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 catacacaaaaactctgaagaaat 536 ||||||||||||| |||||||||| Sbjct: 142652 catacacaaaaacactgaagaaat 142675
>gb|AC147891.2| Xenopus tropicalis clone CH216-2E23, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tgctcctaacaaagataaat 602 |||||||||||||||||||| Sbjct: 166389 tgctcctaacaaagataaat 166370
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttggaagggatgaaccatgtcag 177 |||||| ||||||||||||||||| Sbjct: 1543915 tttggatgggatgaaccatgtcag 1543938
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tgatattggaggaaatatca 299 |||||||||||||||||||| Sbjct: 114759 tgatattggaggaaatatca 114778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,816,393 Number of Sequences: 3902068 Number of extensions: 5816393 Number of successful extensions: 112705 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112224 Number of HSP's gapped (non-prelim): 475 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)