ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA 190 4e-45
2dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
3gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian ... 182 9e-43
4dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
6dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
7dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
8dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
9dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homolog... 50 0.009
10ref|NM_179237.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCO... 48 0.034
11ref|NM_099988.3| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCO... 48 0.034
12ref|NM_001035847.1| Arabidopsis thaliana LHY (LATE ELONGATED HYP... 48 0.034
13gb|AY519507.1| Arabidopsis thaliana MYB transcription factor (At... 48 0.034
14emb|BX817115.1|CNS0AELF Arabidopsis thaliana Full-length cDNA Co... 48 0.034
15emb|AJ006404.1|ATAJ6404 Arabidopsis thaliana mRNA for LATE ELONG... 48 0.034
16gb|BC108602.1| Xenopus laevis cDNA clone MGC:131139 IMAGE:720668... 42 2.1
17gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, comp... 42 2.1
18gb|BC032563.1| Homo sapiens cytoplasmic linker associated protei... 42 2.1
19gb|BC112940.1| Homo sapiens cytoplasmic linker associated protei... 42 2.1
20gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, comp... 42 2.1
21emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clon... 42 2.1
22emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clon... 42 2.1
23emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca ge... 42 2.1
24emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in... 42 2.1
25ref|NM_015282.1| Homo sapiens cytoplasmic linker associated prot... 42 2.1
26dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204 42 2.1
27emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (... 42 2.1
28dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066 42 2.1
29emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chr... 42 2.1
30gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromoso... 42 2.1
31dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds 42 2.1
32gb|AF499719.1| Thellungiella halophila putative selenium-binding... 40 8.2
33gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, comple... 40 8.2
34emb|AL449165.1| Human DNA sequence from clone RP11-533E16 on chr... 40 8.2
35emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G... 40 8.2
36gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosom... 40 8.2
37emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC... 40 8.2
38gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, com... 40 8.2
39emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmi... 40 8.2
40gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, com... 40 8.2
41emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chr... 40 8.2
42emb|AL807398.8| Mouse DNA sequence from clone RP23-479D16 on chr... 40 8.2 
>ref|XM_480189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2178

 Score =  190 bits (96), Expect = 4e-45
 Identities = 216/256 (84%)
 Strand = Plus / Minus

                                                                        
Query: 339  tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
            ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 1969 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 1910

                                                                        
Query: 399  tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
            |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 1909 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 1850

                                                                        
Query: 459  tatcgaaagccatacgaccctcctcggaaacttccttccatgaatcattcgtgcttgaaa 518
             ||| ||||||| ||||||||| || ||||||||||||||||||||| | ||||||| | 
Sbjct: 1849 catcaaaagccagacgaccctcttcagaaacttccttccatgaatcacttgtgcttgcac 1790

                                                                        
Query: 519  tgttcctaaacctgcgatggttcatgtcaccagctgaagaattactgcaacatgcttgct 578
            || ||||||| || || |||||  ||||||| |||||||| ||||||||| |||||||||
Sbjct: 1789 tgctcctaaatctacggtggttattgtcaccggctgaagagttactgcaagatgcttgct 1730

                            
Query: 579  gtgtcttgtcgttagc 594
             || ||||||||||||
Sbjct: 1729 ttgccttgtcgttagc 1714



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                        
Query: 233  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2166 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2107

                                                
Query: 293  ctttgcttccaccgagcacctcttgtaaggtttgaa 328
            ||| |||||||| |||||||||||||| ||||||||
Sbjct: 2106 cttcgcttccactgagcacctcttgtatggtttgaa 2071
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>dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C12, full
           insert sequence
          Length = 1275

 Score =  190 bits (96), Expect = 4e-45
 Identities = 216/256 (84%)
 Strand = Plus / Minus

                                                                       
Query: 339 tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
           ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 798 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 739

                                                                       
Query: 399 tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
           |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 738 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 679

                                                                       
Query: 459 tatcgaaagccatacgaccctcctcggaaacttccttccatgaatcattcgtgcttgaaa 518
            ||| ||||||| ||||||||| || ||||||||||||||||||||| | ||||||| | 
Sbjct: 678 catcaaaagccagacgaccctcttcagaaacttccttccatgaatcacttgtgcttgcac 619

                                                                       
Query: 519 tgttcctaaacctgcgatggttcatgtcaccagctgaagaattactgcaacatgcttgct 578
           || ||||||| || || |||||  ||||||| |||||||| ||||||||| |||||||||
Sbjct: 618 tgctcctaaatctacggtggttattgtcaccggctgaagagttactgcaagatgcttgct 559

                           
Query: 579 gtgtcttgtcgttagc 594
            || ||||||||||||
Sbjct: 558 ttgccttgtcgttagc 543



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                       
Query: 233 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 995 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 936

                                               
Query: 293 ctttgcttccaccgagcacctcttgtaaggtttgaa 328
           ||| |||||||| |||||||||||||| ||||||||
Sbjct: 935 cttcgcttccactgagcacctcttgtatggtttgaa 900



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 60   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 1149 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 1091

                                                    
Query: 120  tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 1090 tggaaggtctg--aagtcctatggtagctcggatgtaaat 1053
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>gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian oscillator component
            (COC1) mRNA, complete cds
          Length = 2608

 Score =  182 bits (92), Expect = 9e-43
 Identities = 215/256 (83%)
 Strand = Plus / Minus

                                                                        
Query: 339  tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
            ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 2215 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 2156

                                                                        
Query: 399  tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
            |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 2155 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 2096

                                                                        
Query: 459  tatcgaaagccatacgaccctcctcggaaacttccttccatgaatcattcgtgcttgaaa 518
             ||| ||||||| ||||||||  || ||||||||||||||||||||| | ||||||| | 
Sbjct: 2095 catcaaaagccagacgaccctattcagaaacttccttccatgaatcacttgtgcttgcac 2036

                                                                        
Query: 519  tgttcctaaacctgcgatggttcatgtcaccagctgaagaattactgcaacatgcttgct 578
            || ||||||| || || |||||  ||||||| |||||||| ||||||||| |||||||||
Sbjct: 2035 tgctcctaaatctacggtggttattgtcaccggctgaagagttactgcaagatgcttgct 1976

                            
Query: 579  gtgtcttgtcgttagc 594
             || ||||||||||||
Sbjct: 1975 ttgccttgtcgttagc 1960



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                        
Query: 233  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2412 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2353

                                                
Query: 293  ctttgcttccaccgagcacctcttgtaaggtttgaa 328
            ||| |||||||| |||||||||||||| ||||||||
Sbjct: 2352 cttcgcttccactgagcacctcttgtatggtttgaa 2317



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 60   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 2566 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 2508

                                                    
Query: 120  tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
            || |||| |||  ||||||||| |||||| ||||||||||
Sbjct: 2507 tggaaggtctg--aagtcctatggtagctcagatgtaaat 2470
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>dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N16, full
            insert sequence
          Length = 3237

 Score =  176 bits (89), Expect = 5e-41
 Identities = 167/193 (86%)
 Strand = Plus / Minus

                                                                        
Query: 402  atccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtttat 461
            |||||||| |||| |||||||||||||||||||||||| || ||||||||||||||  ||
Sbjct: 2697 atccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtgcat 2638

                                                                        
Query: 462  cgaaagccatacgaccctcctcggaaacttccttccatgaatcattcgtgcttgaaatgt 521
            | ||||||| ||||||| | || ||||||||||||||||||||| | ||||||| | || 
Sbjct: 2637 caaaagccagacgacccccttcagaaacttccttccatgaatcacttgtgcttgcactgc 2578

                                                                        
Query: 522  tcctaaacctgcgatggttcatgtcaccagctgaagaattactgcaacatgcttgctgtg 581
            ||||||| || || |||||  ||||||| |||||||| ||||||||| ||||||||| ||
Sbjct: 2577 tcctaaatctacggtggttattgtcaccggctgaagagttactgcaagatgcttgctttg 2518

                         
Query: 582  tcttgtcgttagc 594
             ||||||||||||
Sbjct: 2517 ccttgtcgttagc 2505



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                        
Query: 233  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2957 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2898

                                                
Query: 293  ctttgcttccaccgagcacctcttgtaaggtttgaa 328
            ||| |||||||| |||||||||||||| ||||||||
Sbjct: 2897 cttcgcttccactgagcacctcttgtatggtttgaa 2862



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 60   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3111 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3053

                                                    
Query: 120  tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3052 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3015
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                           
Query: 485     gaaacttccttccatgaatcattcgtgcttgaaatgttcctaaacctgcgatggttcatg 544
               ||||||||||||||||||||| | ||||||| | || ||||||| || || |||||  ||
Sbjct: 3366327 gaaacttccttccatgaatcacttgtgcttgcactgctcctaaatctacggtggttattg 3366268

                                                                 
Query: 545     tcaccagctgaagaattactgcaacatgcttgctgtgtcttgtcgttagc 594
               ||||| |||||||| ||||||||| ||||||||| || ||||||||||||
Sbjct: 3366267 tcaccggctgaagagttactgcaagatgcttgctttgccttgtcgttagc 3366218



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Minus

                                                                           
Query: 339     tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
               ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 3366563 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 3366504

                                                                           
Query: 399     tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
               |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 3366503 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 3366444

                                    
Query: 459     tatcgaaagccatacgaccct 479
                ||| ||||||| ||||||||
Sbjct: 3366443 catcaaaagccagacgaccct 3366423



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 233     ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
               |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 3366760 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 3366701

                                                   
Query: 293     ctttgcttccaccgagcacctcttgtaaggtttgaa 328
               ||| |||||||| |||||||||||||| ||||||||
Sbjct: 3366700 cttcgcttccactgagcacctcttgtatggtttgaa 3366665



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                           
Query: 60      gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
               |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3366914 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3366856

                                                       
Query: 120     tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
               || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3366855 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3366818
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0438H08
          Length = 148626

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                          
Query: 485    gaaacttccttccatgaatcattcgtgcttgaaatgttcctaaacctgcgatggttcatg 544
              ||||||||||||||||||||| | ||||||| | || ||||||| || || |||||  ||
Sbjct: 143894 gaaacttccttccatgaatcacttgtgcttgcactgctcctaaatctacggtggttattg 143835

                                                                
Query: 545    tcaccagctgaagaattactgcaacatgcttgctgtgtcttgtcgttagc 594
              ||||| |||||||| ||||||||| ||||||||| || ||||||||||||
Sbjct: 143834 tcaccggctgaagagttactgcaagatgcttgctttgccttgtcgttagc 143785



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Minus

                                                                          
Query: 339    tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
              ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 144130 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 144071

                                                                          
Query: 399    tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
              |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 144070 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 144011

                                   
Query: 459    tatcgaaagccatacgaccct 479
               ||| ||||||| ||||||||
Sbjct: 144010 catcaaaagccagacgaccct 143990



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                          
Query: 233    ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
              |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 144327 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 144268

                                                  
Query: 293    ctttgcttccaccgagcacctcttgtaaggtttgaa 328
              ||| |||||||| |||||||||||||| ||||||||
Sbjct: 144267 cttcgcttccactgagcacctcttgtatggtttgaa 144232



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                          
Query: 60     gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
              |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 144481 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 144423

                                                      
Query: 120    tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
              || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 144422 tggaaggtctg--aagtcctatggtagctcggatgtaaat 144385
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>dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F11, full
           insert sequence
          Length = 650

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Minus

                                                                       
Query: 339 tcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctcccctctgggaaccacct 398
           ||||||||||||| ||||||||||| ||  |||||||||  ||| |  ||  || | |||
Sbjct: 162 tcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcctccttgctaatctcct 103

                                                                       
Query: 399 tcaatccttctgcttgtggaggagaaaagctttggggaagctttcctctactgaacagtt 458
           |  |||||||| |||| |||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 102 ttgatccttctacttgcggaggagaaaagctttggggaagcctttctctactgaacagtg 43

                                
Query: 459 tatcgaaagccatacgaccct 479
            ||| ||||||| ||||||||
Sbjct: 42  catcaaaagccagacgaccct 22



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                       
Query: 233 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 359 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 300

                                               
Query: 293 ctttgcttccaccgagcacctcttgtaaggtttgaa 328
           ||| |||||||| |||||||||||||| ||||||||
Sbjct: 299 cttcgcttccactgagcacctcttgtatggtttgaa 264



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 60  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 513 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 455

                                                   
Query: 120 tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 454 tggaaggtctg--aagtcctatggtagctcggatgtaaat 417
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>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0498E12
          Length = 153523

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                       
Query: 233 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 292
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 179 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 120

                                               
Query: 293 ctttgcttccaccgagcacctcttgtaaggtttgaa 328
           ||| |||||||| |||||||||||||| ||||||||
Sbjct: 119 cttcgcttccactgagcacctcttgtatggtttgaa 84



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 60  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 119
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 333 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 275

                                                   
Query: 120 tgcaaggactggcaagtcctatagtagcttagatgtaaat 159
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 274 tggaaggtctg--aagtcctatggtagctcggatgtaaat 237
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>dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homologue1, complete cds
          Length = 2338

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 300  tccaccgagcacctcttgtaaggtttgaa 328
            ||||||||||||||||||||||| |||||
Sbjct: 2116 tccaccgagcacctcttgtaaggcttgaa 2088
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>ref|NM_179237.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding /
            transcription factor AT1G01060 (LHY) transcript variant
            AT1G01060.2 mRNA, complete cds
          Length = 2814

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2160 atacgaccctcttcggagacttccttccacgaatca 2125
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>ref|NM_099988.3| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding /
            transcription factor AT1G01060 (LHY) transcript variant
            AT1G01060.1 mRNA, complete cds
          Length = 2704

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2050 atacgaccctcttcggagacttccttccacgaatca 2015
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>ref|NM_001035847.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding
            AT1G01060 (LHY) transcript variant AT1G01060.3 mRNA,
            complete cds
          Length = 2517

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1967 atacgaccctcttcggagacttccttccacgaatca 1932
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>gb|AY519507.1| Arabidopsis thaliana MYB transcription factor (At1g01060) mRNA,
            complete cds
          Length = 1938

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1610 atacgaccctcttcggagacttccttccacgaatca 1575
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>emb|BX817115.1|CNS0AELF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZB04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2427

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2037 atacgaccctcttcggagacttccttccacgaatca 2002
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>emb|AJ006404.1|ATAJ6404 Arabidopsis thaliana mRNA for LATE ELONGATED HYPOCOTYL MYB
            transcription factor
          Length = 2526

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 470  atacgaccctcctcggaaacttccttccatgaatca 505
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1947 atacgaccctcttcggagacttccttccacgaatca 1912
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>gb|BC108602.1| Xenopus laevis cDNA clone MGC:131139 IMAGE:7206683, complete cds
          Length = 2690

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 403  tccttctgcttgtggaggaga 423
            |||||||||||||||||||||
Sbjct: 1937 tccttctgcttgtggaggaga 1957
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>gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, complete sequence
          Length = 239915

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 581   gtcttgtcgttagcttgatcttggt 605
             |||||| ||||||||||||||||||
Sbjct: 39341 gtcttgacgttagcttgatcttggt 39317
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>gb|BC032563.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
           clone IMAGE:5579440), complete cds
          Length = 3746

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 tagtagcttcatcttgctccc 383
           |||||||||||||||||||||
Sbjct: 561 tagtagcttcatcttgctccc 541
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>gb|BC112940.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
            clone MGC:131895 IMAGE:5501463), complete cds
          Length = 4974

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 4675 tagtagcttcatcttgctccc 4655
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>gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, complete cds
          Length = 7888

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 4707 tagtagcttcatcttgctccc 4687
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>emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clone DKFZp686H2039)
          Length = 4021

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 3752 tagtagcttcatcttgctccc 3732
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>emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clone DKFZp686D1968)
          Length = 4787

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 1612 tagtagcttcatcttgctccc 1592
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>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like
             retrotransposon, cosmids C012B17 and C123B01
          Length = 64219

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 132   caagtcctatagtagcttagatgta 156
             ||||||||| |||||||||||||||
Sbjct: 15454 caagtcctacagtagcttagatgta 15478
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>emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in linkage group 1,
              complete sequence
          Length = 172983

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 74     attaacatacaacacataacaaatt 98
              ||||||||| |||||||||||||||
Sbjct: 162761 attaacatataacacataacaaatt 162785
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>ref|NM_015282.1| Homo sapiens cytoplasmic linker associated protein 1 (CLASP1), mRNA
          Length = 8089

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 4932 tagtagcttcatcttgctccc 4912
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>dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204
          Length = 2326

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 2042 tagtagcttcatcttgctccc 2022
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>emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (from clone DKFZp686A1844)
          Length = 5770

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 2581 tagtagcttcatcttgctccc 2561
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>dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066
          Length = 5906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 2990 tagtagcttcatcttgctccc 2970
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>emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chromosome 2, complete
              sequence
          Length = 191379

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 316    tgtaaggtttgaagctgcagc 336
              |||||||||||||||||||||
Sbjct: 135315 tgtaaggtttgaagctgcagc 135295
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>gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromosome ul, complete
             sequence
          Length = 105327

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   ttctgcttgtggaggagaaaa 426
             |||||||||||||||||||||
Sbjct: 41811 ttctgcttgtggaggagaaaa 41831
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>dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds
          Length = 6951

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tagtagcttcatcttgctccc 383
            |||||||||||||||||||||
Sbjct: 3795 tagtagcttcatcttgctccc 3775
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>gb|AF499719.1| Thellungiella halophila putative selenium-binding protein mRNA,
           complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ttttggtaccaacctcgtca 272
           ||||||||||||||||||||
Sbjct: 509 ttttggtaccaacctcgtca 528
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>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence
          Length = 141509

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 546   caccagctgaagaattactgcaacatgc 573
             |||||||||||||| ||| |||||||||
Sbjct: 49609 caccagctgaagaagtacagcaacatgc 49582
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>emb|AL449165.1| Human DNA sequence from clone RP11-533E16 on chromosome 6, complete
            sequence
          Length = 57313

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 487  aacttccttccatgaatcat 506
            ||||||||||||||||||||
Sbjct: 5018 aacttccttccatgaatcat 4999
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>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the
             RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene)
             and part of a ribosomal protein S4 pseudogene, complete
             sequence
          Length = 100167

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ttgcaaggactggcaagtcc 138
             ||||||||||||||||||||
Sbjct: 24880 ttgcaaggactggcaagtcc 24899
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>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    catacaacacataacaaatt 98
             ||||||||||||||||||||
Sbjct: 69968 catacaacacataacaaatt 69949
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>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2
          Length = 99814

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    cattaacatacaacacataa 92
             ||||||||||||||||||||
Sbjct: 99133 cattaacatacaacacataa 99152
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>gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, complete sequence
          Length = 151601

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   taccgcaatttcttgaaaat 178
             ||||||||||||||||||||
Sbjct: 13926 taccgcaatttcttgaaaat 13907
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>emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmid pJW565 DNA, LlaBIIM,
            LlaBIIR genes and orfX
          Length = 12828

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  aatttcttgaaaatacacta 184
            ||||||||||||||||||||
Sbjct: 8201 aatttcttgaaaatacacta 8182
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>gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, complete sequence
          Length = 179805

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   taccgcaatttcttgaaaat 178
             ||||||||||||||||||||
Sbjct: 87184 taccgcaatttcttgaaaat 87165
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>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete
              sequence
          Length = 166025

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ccataaagtagcatgcatag 28
              ||||||||||||||||||||
Sbjct: 128441 ccataaagtagcatgcatag 128460
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>emb|AL807398.8| Mouse DNA sequence from clone RP23-479D16 on chromosome X, complete
            sequence
          Length = 106217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 312  ctcttgtaaggtttgaagctgcag 335
            ||||||||||||| ||||||||||
Sbjct: 8615 ctcttgtaaggttagaagctgcag 8592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,962,322
Number of Sequences: 3902068
Number of extensions: 4962322
Number of successful extensions: 90158
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90035
Number of HSP's gapped (non-prelim): 123
length of query: 605
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 582
effective length of database: 17,143,297,704
effective search space: 9977399263728
effective search space used: 9977399263728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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