ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3o14 |
|---|---|
| Clone Library Name | barley_pub |
>SPC18_MOUSE (Q9R0P6) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) (Sid 2895) Length = 179 Score = 188 bits (477), Expect = 1e-47 Identities = 93/147 (63%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q+ G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQD-GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY ++ LGL V+ +E Sbjct: 153 TILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC21_RAT (Q9WTR7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 187 bits (476), Expect = 2e-47 Identities = 91/147 (61%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IP Sbjct: 45 MIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIP 104 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRVIKVHE+ ++G++ LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG V Sbjct: 105 IVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMV 163 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY L+ +G V+ +E Sbjct: 164 TIIMNDYPKFKYALVAVMGAYVLLKRE 190
>SPC18_PONPY (Q5R9C7) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 187 bits (476), Expect = 2e-47 Identities = 93/147 (63%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q +G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY ++ LGL V+ +E Sbjct: 153 TILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_HUMAN (P67812) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 187 bits (476), Expect = 2e-47 Identities = 93/147 (63%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q +G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY ++ LGL V+ +E Sbjct: 153 TILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_CANFA (P67811) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 187 bits (476), Expect = 2e-47 Identities = 93/147 (63%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q +G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY ++ LGL V+ +E Sbjct: 153 TILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_BOVIN (P67810) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 187 bits (476), Expect = 2e-47 Identities = 93/147 (63%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q +G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY ++ LGL V+ +E Sbjct: 153 TILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC21_PONPY (Q5RC30) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 187 bits (475), Expect = 2e-47 Identities = 91/147 (61%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IP Sbjct: 45 MIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIP 104 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRVIKVHE+ ++G++ LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG V Sbjct: 105 IVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMV 163 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY L+ +G V+ +E Sbjct: 164 TIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_MOUSE (Q9D8V7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 187 bits (475), Expect = 2e-47 Identities = 91/147 (61%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IP Sbjct: 45 MIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIP 104 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRVIKVHE+ ++G++ LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG V Sbjct: 105 IVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMV 163 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY L+ +G V+ +E Sbjct: 164 TIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_HUMAN (Q9BY50) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 187 bits (475), Expect = 2e-47 Identities = 91/147 (61%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IP Sbjct: 45 MIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIP 104 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRVIKVHE+ ++G++ LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG V Sbjct: 105 IVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMV 163 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY L+ +G V+ +E Sbjct: 164 TIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_CANFA (P13679) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 187 bits (475), Expect = 2e-47 Identities = 91/147 (61%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IP Sbjct: 45 MIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIP 104 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRVIKVHE+ ++G++ LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG V Sbjct: 105 IVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMV 163 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P KY L+ +G V+ +E Sbjct: 164 TIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC18_RAT (P42667) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 185 bits (469), Expect = 1e-46 Identities = 91/147 (61%), Positives = 115/147 (78%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIP 444 +IWKGLM+ TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIP Sbjct: 34 MIWKGLMLITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIP 93 Query: 443 IVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWV 264 IVHRV+K+HE+Q+ G + LTKGDNN DDR LY QGQ WL+K ++GRA G++PY+G V Sbjct: 94 IVHRVLKIHEKQD-GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIV 152 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI+M + P Y ++ LGL V+ +E Sbjct: 153 TILMNDYPKFSYAVLFLLGLFVLVHRE 179
>SEC11_YEAST (P15367) Signal sequence-processing protein SEC11 (EC 3.4.-.-)| Length = 167 Score = 135 bits (340), Expect = 1e-31 Identities = 68/147 (46%), Positives = 98/147 (66%), Gaps = 1/147 (0%) Frame = -1 Query: 620 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPI 441 + W+GL +AT S SP+VVVLSGSMEP F+RGDILFL + G++VV+ ++G++IPI Sbjct: 22 MFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNRNTFNQVGDVVVYEVEGKQIPI 81 Query: 440 VHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQK-HHIMGRAVGYLPYVGWV 264 VHRV++ H + +LTKGDNN G+D LYA +++L K I+G GY P +G++ Sbjct: 82 VHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIYLNKSKEIVGTVKGYFPQLGYI 140 Query: 263 TIVMTEKPIIKYLLIGALGLLVITSKE 183 TI ++E K+ L+G LGL + E Sbjct: 141 TIWISENKYAKFALLGMLGLSALLGGE 167
>LEPW_BACSU (P54506) Signal peptidase I W (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 190 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Frame = -1 Query: 566 VLSGSMEPGFKRGDILFLHMSQD--PIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEV 393 VLSGSMEP F G ++ + D ++ G+++ F D + HR++ + ++ + Sbjct: 43 VLSGSMEPEFNTGSLILVKEITDVKELQKGDVITFMQDA-NTAVTHRIVDI--TKQGDHL 99 Query: 392 DILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGY-LPYVGWVTIVMTEKPIIKYLLIG 216 TKGDNN D + ++ + G+ LPY G++ + +PI +L+ Sbjct: 100 LFKTKGDNNAAAD-------SAPVSDENVRAQYTGFQLPYAGYM-LHFASQPIGTAVLLI 151 Query: 215 ALGLLVI 195 G++++ Sbjct: 152 VPGVMLL 158
>FBX42_PONPY (Q5RDA9) F-box only protein 42| Length = 717 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = +1 Query: 445 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 609 G RP + T S R GS + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>FBX42_HUMAN (Q6P3S6) F-box only protein 42| Length = 717 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = +1 Query: 445 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 609 G RP + T S R GS + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>KS6A6_HUMAN (Q9UK32) Ribosomal protein S6 kinase alpha-6 (EC 2.7.11.1)| (S6K-alpha 6) (90 kDa ribosomal protein S6 kinase 6) (p90-RSK 6) (Ribosomal S6 kinase 4) (RSK-4) (pp90RSK4) Length = 745 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Frame = -1 Query: 542 GFKRGDILFLHMSQDPIRTGEIVVFNIDG--REIPIVHRVIKVHERQESGEVDIL-TKGD 372 G G++ L M +P+ GE + +G +EIPI H V + +E+ + + ++L G Sbjct: 22 GASSGEVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADPAQFELLKVLGQ 81 Query: 371 NNFGDDRLLYAQ-----GQLWLQK 315 +FG L+ + GQL+ K Sbjct: 82 GSFGKVFLVRKKTGPDAGQLYAMK 105
>RMAR_KLULA (Q6DN56) Mitochondrial ribosomal protein VAR1| Length = 388 Score = 31.2 bits (69), Expect = 2.6 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +3 Query: 342 IQKSVIPKIIITF---REDINFSTFLAFMNLNHTVNNWNFTAINIKNNYFSSADRILAHV 512 I K +I K I + +I F +L++ N+N +NN N NI +NY + + L ++ Sbjct: 110 IYKLIISKPIFEHSINKVNIKFFYYLSYKNINKNINNNNNLINNIYSNYKFNINSKLINL 169 Query: 513 QKQNITPFKSRL 548 NI + L Sbjct: 170 LNNNINSISNIL 181
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +2 Query: 92 SSWYTAQQNLFCPRLHL--HYKIKPCTKVDSFTLSM 193 SSW+ + LF PR H H ++PC +D FTL + Sbjct: 223 SSWHVPE--LFLPRSHSTGHSLVQPCQNIDRFTLQL 256
>SMS1_RAT (Q7TSX5) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 30.8 bits (68), Expect = 3.4 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVIFC 518 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>SMS1_MOUSE (Q8VCQ6) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 30.8 bits (68), Expect = 3.4 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVIFC 518 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>SMS1_HUMAN (Q86VZ5) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 30.8 bits (68), Expect = 3.4 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVIFC 518 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>SMS1_CHICK (Q7T3T4) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Sphingomyelin synthase 1) (MOB protein) Length = 417 Score = 30.4 bits (67), Expect = 4.4 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVIFC 518 ++++ + RRLWW+ + W+L + G +FC Sbjct: 299 FIKEYSPRRLWWYHWLCWTLSMVG-MFC 325
>ARAB_SHIFL (Q83MG5) Ribulokinase (EC 2.7.1.16)| Length = 565 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +3 Query: 81 KIHRPVGTRRNKTCSALDYICTTRSNHAQRLTASLFRCYDQQAQRANQ 224 K+H + + + K SA++ RS AQR L+R Y Q A A Q Sbjct: 501 KVHADIPSAQQKMASAVEKTLQPRSEQAQRF-EQLYRRYQQWAMSAEQ 547
>ARAB_ECO57 (P58541) Ribulokinase (EC 2.7.1.16)| Length = 565 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +3 Query: 81 KIHRPVGTRRNKTCSALDYICTTRSNHAQRLTASLFRCYDQQAQRANQ 224 K+H + + + K SA++ RS AQR L+R Y Q A A Q Sbjct: 501 KVHADIPSAQQKMASAVEKTLQPRSEQAQRF-EQLYRRYQQWAMSAEQ 547
>SMS2_MOUSE (Q9D4B1) Phosphatidylcholine:ceramide cholinephosphotransferase 2| (EC 2.7.-.-) (Sphingomyelin synthase 2) Length = 365 Score = 29.6 bits (65), Expect = 7.5 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVI 524 ++++ + R WW+ LV W L G+I Sbjct: 239 FIKEYSPRHFWWYHLVCWLLSAAGII 264
>SCAM3_MOUSE (O35609) Secretory carrier-associated membrane protein 3 (Secretory| carrier membrane protein 3) Length = 349 Score = 29.3 bits (64), Expect = 9.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 524 YHPF*IQAPCYQKEPPQPATRSLSQPSIPSI 616 Y+PF + P EPP PA L PS PS+ Sbjct: 41 YNPFENREPPPAYEPPAPAPAPLPPPSAPSV 71
>SMS2_HUMAN (Q8NHU3) Phosphatidylcholine:ceramide cholinephosphotransferase 2| (EC 2.7.-.-) (Sphingomyelin synthase 2) Length = 365 Score = 29.3 bits (64), Expect = 9.8 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = -2 Query: 601 WLRQGASRRLWWFFLVAWSLDLKGVI 524 ++++ + R WW+ L+ W L G+I Sbjct: 239 FIKEYSPRHFWWYHLICWLLSAAGII 264
>RPOC_ZYMMO (Q5NPK4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1391 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 491 RTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGD 372 RTGE+V+ DGRE+ ++ H G D++ KGD Sbjct: 971 RTGEVVLVGTDGRELASSRILLGAHLLHNDG--DMVKKGD 1008 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,653,058 Number of Sequences: 219361 Number of extensions: 2044484 Number of successful extensions: 5748 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 5498 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5722 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
