ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 32 1.0
2Y1551_THEMA (Q9X1N7) Protein TM1551 31 1.8
3KPB1_RABIT (P18688) Phosphorylase b kinase alpha regulatory chai... 30 4.0
4KPB1_MOUSE (P18826) Phosphorylase b kinase alpha regulatory chai... 30 4.0
5KPB1_HUMAN (P46020) Phosphorylase b kinase alpha regulatory chai... 30 4.0
6Y1403_METJA (Q58798) Hypothetical protein MJ1403 30 4.0
7ACDB_METKA (Q8TXF4) Acetyl-CoA decarbonylase/synthase complex be... 30 5.2
8THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (E... 29 6.8
9PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25 29 8.9
10LIN11_CAEEL (P20154) Protein lin-11 (Abnormal cell lineage prote... 29 8.9

>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 518 LGYAWTLWKEGRSTELLDEAMMGS 447
           L Y W+ WKEGR+ E++D  ++ S
Sbjct: 742 LSYVWSRWKEGRALEIVDPVIVDS 765



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>Y1551_THEMA (Q9X1N7) Protein TM1551|
          Length = 174

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 350 DNTLP*SIFXXXXXXXK*FHKSDNTLPGCDRSYCPSSPHQAVQ 478
           D ++P  +F          HK+D +L GC  +Y P+ P+ A++
Sbjct: 28  DESVPEELFKRRAGAFVTLHKTDGSLRGCIGTYLPTKPNLALE 70



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>KPB1_RABIT (P18688) Phosphorylase b kinase alpha regulatory chain, skeletal|
            muscle isoform (Phosphorylase kinase alpha M subunit)
          Length = 1237

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 197  SSTTKSMTPGRLSLGAHARKILN 129
            SSTT+ MTPG +    H   +LN
Sbjct: 1108 SSTTREMTPGEIKFSVHVESVLN 1130



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>KPB1_MOUSE (P18826) Phosphorylase b kinase alpha regulatory chain, skeletal|
            muscle isoform (Phosphorylase kinase alpha M subunit)
          Length = 1241

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 197  SSTTKSMTPGRLSLGAHARKILN 129
            SSTT+ MTPG +    H   +LN
Sbjct: 1112 SSTTREMTPGEIKFSVHVESVLN 1134



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>KPB1_HUMAN (P46020) Phosphorylase b kinase alpha regulatory chain, skeletal|
            muscle isoform (Phosphorylase kinase alpha M subunit)
          Length = 1223

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 197  SSTTKSMTPGRLSLGAHARKILN 129
            SSTT+ MTPG +    H   +LN
Sbjct: 1094 SSTTREMTPGEIKFSVHVESVLN 1116



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>Y1403_METJA (Q58798) Hypothetical protein MJ1403|
          Length = 374

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -2

Query: 189 NKEYDSGALVLRGTCTE--NSQLSSTRSCWLRYGNSDNGASTAHSNNDNGCL-VVYGTQF 19
           N  YD+GA+ +  TC +    Q +     WL Y N +     A  +  NGC    YGT F
Sbjct: 73  NMFYDAGAIRVAATCIDKIRYQDADDSDSWLGYPNGN--GKIAKPSTSNGCYNSTYGTVF 130



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>ACDB_METKA (Q8TXF4) Acetyl-CoA decarbonylase/synthase complex beta subunit (EC|
           2.3.1.-) (ACDS complex beta subunit) (ACDS complex
           acyltransferase)
          Length = 467

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = -2

Query: 261 YSEGYPYLNQR--IWCRFFKSIQE 196
           Y EG+ +LNQR  IWCR  K++ E
Sbjct: 100 YVEGFMHLNQRDQIWCRVSKNVTE 123



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>THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (EC 4.2.3.1)|
           (TS)
          Length = 526

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 63  NELWTHRCRYSHTGANMTLSMTI 131
           N+LW   C  SHTG+   L MT+
Sbjct: 187 NDLWVKHCGISHTGSFKDLGMTV 209



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>PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25|
          Length = 672

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 150 TCTENSQLSSTRSCWLRYGNSDNGASTAHSNNDNGCLVVYGTQFNLCY 7
           TC+ N+Q +S  +C       +  ++T  SN +NGCL         CY
Sbjct: 125 TCSTNTQCASGYTCNNGACCPNTNSNTCSSNGNNGCLAGQTMVNGQCY 172



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>LIN11_CAEEL (P20154) Protein lin-11 (Abnormal cell lineage protein 11)|
          Length = 405

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 437 DRSYCPSSPHQAVQYFCLPSTTSTRN 514
           D+ + P  P   VQ+FC P TTS  N
Sbjct: 325 DQQFYPPPPPSNVQFFCDPYTTSPNN 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,420,360
Number of Sequences: 219361
Number of extensions: 1443842
Number of successful extensions: 3382
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3381
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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