ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3l02 |
|---|---|
| Clone Library Name | barley_pub |
>PSBH_HORVU (P12363) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 67.0 bits (162), Expect = 5e-11 Identities = 34/36 (94%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSSILLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 72
>PSBH_WHEAT (P69555) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGILTN 72
>PSBH_SECCE (P69554) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGILTN 72
>PSBH_SACOF (Q6ENT5) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGILTN 72
>PSBH_SACHY (Q6L373) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGILTN 72
>PSBH_MAIZE (P24993) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGILTN Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGILTN 72
>PSBH_ORYSA (P09449) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 63.9 bits (154), Expect = 4e-10 Identities = 31/36 (86%), Positives = 33/36 (91%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFA+FLSIILEIYNSS+LLDGIL N Sbjct: 37 GTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 72
>PSBH_ORYNI (Q6ENE5) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 63.9 bits (154), Expect = 4e-10 Identities = 31/36 (86%), Positives = 33/36 (91%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFA+FLSIILEIYNSS+LLDGIL N Sbjct: 37 GTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 72
>PSBH_CALFE (Q7YJU9) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 62.4 bits (150), Expect = 1e-09 Identities = 31/36 (86%), Positives = 33/36 (91%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G PFMGVAMALFAIFLSIILEIYNSS+LLDGI T+ Sbjct: 37 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGISTS 72
>PSBH_AMBTC (Q70XX9) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 60.8 bits (146), Expect = 4e-09 Identities = 30/33 (90%), Positives = 31/33 (93%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G PFMGVAMALFAIFLSIILEIYNSS+LLDGI Sbjct: 38 GTTPFMGVAMALFAIFLSIILEIYNSSVLLDGI 70
>PSBH_LOTJA (Q9BBQ7) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.7 bits (143), Expect = 8e-09 Identities = 30/36 (83%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+AMALFAIFLSIILEIYNSSILLDGI N Sbjct: 37 GTTPLMGIAMALFAIFLSIILEIYNSSILLDGISMN 72
>PSBH_ARATH (P56780) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.7 bits (143), Expect = 8e-09 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISVN 72
>PSBH_TOBAC (P06415) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.3 bits (142), Expect = 1e-08 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_SPIOL (P05146) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.3 bits (142), Expect = 1e-08 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_POPDE (Q36632) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.3 bits (142), Expect = 1e-08 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_ATRBE (Q7FNS3) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 59.3 bits (142), Expect = 1e-08 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_OENHO (P69553) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 58.2 bits (139), Expect = 2e-08 Identities = 28/36 (77%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+AMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGLAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_OENAR (P69552) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 58.2 bits (139), Expect = 2e-08 Identities = 28/36 (77%), Positives = 31/36 (86%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+AMALFA+FLSIILEIYNSS+LLDGI N Sbjct: 37 GTTPLMGLAMALFAVFLSIILEIYNSSVLLDGISMN 72
>PSBH_NYMAL (Q6EW23) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 58.2 bits (139), Expect = 2e-08 Identities = 28/33 (84%), Positives = 30/33 (90%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGVAMALFA+FLSIILEIYNSS+LLDGI Sbjct: 37 GTTPLMGVAMALFAVFLSIILEIYNSSVLLDGI 69
>PSBH_PANGI (Q68RX8) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MGVAMALFAIFLSIILEIYNSS+LLD I N Sbjct: 37 GTTPLMGVAMALFAIFLSIILEIYNSSVLLDEISMN 72
>PSBH_PINTH (P41627) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 74 Score = 56.2 bits (134), Expect = 9e-08 Identities = 27/33 (81%), Positives = 29/33 (87%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG AMALFA+FLSIILEIYNSS+LLDGI Sbjct: 37 GTTPLMGFAMALFAVFLSIILEIYNSSVLLDGI 69
>PSBH_PEA (Q9XQR3) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 72 Score = 55.5 bits (132), Expect = 2e-07 Identities = 27/36 (75%), Positives = 30/36 (83%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+AMALFA+FLSIILEIYNSS+LLD I N Sbjct: 37 GTTPLMGIAMALFAVFLSIILEIYNSSLLLDQISMN 72
>PSBH_PHYPA (Q6YXN1) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 53.1 bits (126), Expect = 8e-07 Identities = 24/33 (72%), Positives = 28/33 (84%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGVAM LFA+FL IILE+YNSS+LLDG+ Sbjct: 37 GTTPLMGVAMGLFAVFLVIILELYNSSVLLDGV 69
>PSBH_ANTFO (Q85CN0) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 52.8 bits (125), Expect = 1e-06 Identities = 23/33 (69%), Positives = 28/33 (84%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG+AM LFA+FL IILE+YNSS+LLDG+ Sbjct: 37 GTTPLMGIAMGLFAVFLVIILELYNSSVLLDGV 69
>PSBH_MARPO (P12160) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 52.0 bits (123), Expect = 2e-06 Identities = 22/33 (66%), Positives = 28/33 (84%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG+ MALFA+FL +ILE+YNSS+LLDG+ Sbjct: 37 GTTPLMGIMMALFAVFLVVILELYNSSVLLDGV 69
>PSBH_PINKO (Q85X08) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 74 Score = 51.6 bits (122), Expect = 2e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MG MALFA+FLSIILEIYNSS+LLDGI Sbjct: 37 GTTALMGFTMALFAVFLSIILEIYNSSVLLDGI 69
>PSBH_PSINU (Q8WHZ4) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG MALFAIFL IILEIYNSS+LLDG+ Sbjct: 37 GTTPLMGFFMALFAIFLVIILEIYNSSVLLDGL 69
>PSBH_CHAGL (Q8M9Z3) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 50.1 bits (118), Expect = 7e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MGV MALFA+FL IILEIYNSS+LLDGI Sbjct: 37 GTTVLMGVFMALFAVFLVIILEIYNSSVLLDGI 69
>PSBH_ADICA (Q85FJ4) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 50.1 bits (118), Expect = 7e-06 Identities = 25/33 (75%), Positives = 26/33 (78%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG MALFAIFL ILEIYNSS+LLDGI Sbjct: 37 GTTPLMGFFMALFAIFLVTILEIYNSSVLLDGI 69
>PSBH_SPIMX (Q71KP6) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 77 Score = 48.9 bits (115), Expect = 1e-05 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MGV MALFA+FL IILEIYN+S+LLDGI Sbjct: 37 GTTVLMGVFMALFAVFLVIILEIYNASVLLDGI 69
>PSBH_MESVI (Q9MUV4) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 48.9 bits (115), Expect = 1e-05 Identities = 24/36 (66%), Positives = 28/36 (77%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G MGV MALFA+FL IIL+IYN+S+LLDGI N Sbjct: 31 GTTVLMGVFMALFAVFLVIILQIYNASVLLDGIPAN 66
>PSBH_HUPLU (Q5SD22) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 73 Score = 48.1 bits (113), Expect = 3e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGVAMA FA+F IILE+YNSS+ LDGI Sbjct: 37 GTTPIMGVAMASFAVFSVIILELYNSSVSLDGI 69
>PSBH_SYNEL (Q8DJ43) Photosystem II reaction center H protein (PSII-H)| Length = 66 Score = 45.1 bits (105), Expect(2) = 3e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P M V M LF +FL IILEIYNS+++LDG+ Sbjct: 26 GTTPLMAVFMGLFLVFLLIILEIYNSTLILDGV 58 Score = 22.7 bits (47), Expect(2) = 3e-05 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -1 Query: 700 PGWGTTP 680 PGWGTTP Sbjct: 23 PGWGTTP 29
>PSBH_NEPOL (Q9TKW7) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 81 Score = 47.8 bits (112), Expect = 3e-05 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG+ MALFA+FL IILEIYNSS++LD + Sbjct: 40 GTTPVMGLFMALFAVFLLIILEIYNSSLILDDV 72
>PSBH_KLEBI (Q71KN4) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 78 Score = 47.8 bits (112), Expect = 3e-05 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MGV MALFA+FL IILE+YN+S+LLDG+ Sbjct: 37 GTTVLMGVFMALFAVFLVIILELYNASVLLDGV 69
>PSBH_COLOB (Q71KQ7) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 78 Score = 46.6 bits (109), Expect = 7e-05 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MGV +ALFA+FL IILE+YN+S+LLDGI Sbjct: 37 GTTVLMGVFIALFAVFLVIILELYNASVLLDGI 69
>PSBH_CHLVU (P56323) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 79 Score = 46.6 bits (109), Expect = 7e-05 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G MG+ MALFA+FL IILEIYNSS+LLD + Sbjct: 38 GTTVLMGIFMALFAVFLVIILEIYNSSVLLDDV 70
>PSBH_SYNY3 (P14835) Photosystem II reaction center H protein (PSII-H)| Length = 63 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/32 (65%), Positives = 26/32 (81%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDG 595 G P MGV MALF +FL IIL+IYNSS++L+G Sbjct: 25 GTTPVMGVFMALFLVFLLIILQIYNSSLILEG 56
>PSBH_SYNPX (Q7U9I7) Photosystem II reaction center H protein (PSII-H)| Length = 66 Score = 43.9 bits (102), Expect = 5e-04 Identities = 18/36 (50%), Positives = 26/36 (72%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+ M LF +FL +IL++YN S++L+GI N Sbjct: 26 GTTPVMGIFMVLFLVFLLVILQLYNKSLILEGINVN 61
>PSBH_CYACA (O19925) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 43.9 bits (102), Expect = 5e-04 Identities = 19/33 (57%), Positives = 26/33 (78%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG+ MALF +FL IIL+IYNSS++L+ + Sbjct: 26 GTTPIMGIFMALFLLFLIIILQIYNSSLILENL 58
>PSBH_CYAPA (P48105) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 40.4 bits (93), Expect(2) = 6e-04 Identities = 18/33 (54%), Positives = 24/33 (72%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P M V M LF +FL II++IYNSS+LL+ + Sbjct: 26 GTTPLMAVFMLLFFVFLLIIIQIYNSSLLLENV 58 Score = 22.7 bits (47), Expect(2) = 6e-04 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -1 Query: 700 PGWGTTP 680 PGWGTTP Sbjct: 23 PGWGTTP 29
>PSBH_CYAME (Q85FZ2) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 64 Score = 43.1 bits (100), Expect = 8e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGV M LF +FL IIL+IYNSS+LL+ + Sbjct: 26 GTTPIMGVFMVLFLLFLVIILQIYNSSLLLNDV 58
>PSBH_SYNP6 (Q5N2J2) Photosystem II reaction center H protein (PSII-H)| Length = 67 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLD 598 G P MGV M LF +FL IIL+IYNSS++LD Sbjct: 26 GTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56
>PSBH_GRATL (Q6B8Y7) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/33 (57%), Positives = 25/33 (75%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGV M LF +FL IIL+IYNSS++L+ + Sbjct: 26 GTTPIMGVFMLLFFLFLLIILQIYNSSLILENV 58
>PSBH_EUGGR (P31555) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 70 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 6/40 (15%) Frame = -2 Query: 699 RVGGLLPFMGVA------MALFAIFLSIILEIYNSSILLD 598 + G +LP G A M LFAIFL+IILEIYNSS++LD Sbjct: 29 KYGKVLPGWGTAGIMLIFMTLFAIFLTIILEIYNSSVILD 68
>PSBH_ANASP (Q8YYK2) Photosystem II reaction center H protein (PSII-H)| Length = 62 Score = 42.0 bits (97), Expect = 0.002 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGV MALF +FL IIL++YN SIL+ + Sbjct: 26 GTTPVMGVFMALFLVFLLIILQLYNKSILIQDV 58
>PSBH_PORPU (P51325) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG+ M LF +FL IIL+IYNSS++L+ + Sbjct: 26 GTTPIMGIFMLLFFLFLLIILQIYNSSLVLENV 58
>PSBH_ODOSI (P49475) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MGV M F +FL IIL+IYNSS++++ + Sbjct: 26 GTTPIMGVVMLAFLVFLLIILQIYNSSLIIENV 58
>PSBH_GLOVI (Q7NCH7) Photosystem II reaction center H protein (PSII-H)| Length = 78 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG +ALF +FL IIL+I N+S+LL+G+ Sbjct: 26 GTTPIMGALIALFGVFLIIILQIANNSLLLEGV 58
>PSBH_PROHO (P31095) Photosystem II reaction center H protein (PSII-H)| Length = 64 Score = 40.8 bits (94), Expect = 0.004 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGILTN 583 G P MG+ M L +FL IIL+IYNS+I+LD N Sbjct: 26 GTTPLMGLFMGLLFVFLLIILQIYNSTIVLDAFSVN 61
>PSBH_GUITH (O78514) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 67 Score = 40.4 bits (93), Expect = 0.005 Identities = 18/33 (54%), Positives = 24/33 (72%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G P MG M LF +FL IIL+IYNSS++L+ + Sbjct: 26 GTTPAMGFVMLLFFLFLLIILQIYNSSLILENV 58
>PSBH_CHLRE (P22666) Photosystem II reaction center H protein (Photosystem II| 10 kDa phosphoprotein) (PSII-H) Length = 87 Score = 38.5 bits (88), Expect = 0.020 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDGI 592 G M V + LFA FL IILEIYNSS++LD + Sbjct: 44 GTTVLMAVFILLFAAFLLIILEIYNSSLILDDV 76
>PSBH_PROMP (Q7V341) Photosystem II reaction center H protein (PSII-H)| Length = 66 Score = 34.7 bits (78), Expect = 0.29 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDG 595 G +P M V L +FL I+L+IYN S+LL G Sbjct: 27 GAVPIMTVIGLLLLVFLVILLQIYNQSLLLQG 58
>PSBH_PROMA (Q7VDT5) Photosystem II reaction center H protein (PSII-H)| Length = 67 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 690 GLLPFMGVAMALFAIFLSIILEIYNSSILLDG 595 G +P M L +FL I+L+IYN S+LL G Sbjct: 27 GAVPVMAFVGVLLLVFLVILLQIYNQSLLLQG 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,517,534 Number of Sequences: 219361 Number of extensions: 1326837 Number of successful extensions: 2480 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2480 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
