ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3g04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E03, full insert sequence Length = 622 Score = 214 bits (108), Expect = 3e-52 Identities = 208/240 (86%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 308 cttcaaggttgcggttcgtgctggggcgtggcaggagaatctggtgctatggtgaaatgc 367 |||||||| || || |||||||| || |||| || ||||| ||||| |||||||||||| Sbjct: 242 cttcaaggctgtggctcgtgctgcggtgtggtcggcgaatccggtgcaatggtgaaatgc 183 Query: 368 actcctctcccttgcccagactggaggatgaatgccacctcagttgctgccaacgcagct 427 ||||| | |||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 182 actccggttccttgcccagactgaagaatgaatgccacctcagttgctgctaaggcagcc 123 Query: 428 gcctcctgccgatgtctgcgacgctgcaatatactaattgcccaagccattatatagaat 487 |||||||| || |||||||| |||||||| ||||| | |||||||||||||||||||||| Sbjct: 122 gcctcctgtcgctgtctgcggcgctgcaagatactcactgcccaagccattatatagaat 63 Query: 488 gggagaagaaaaccagcagcacgcagtaaggaaaagtgaaaacattgctgaagtgtcatc 547 || || ||||| ||||||||||||| | || ||||||||||||||||| ||||| ||||| Sbjct: 62 ggtagcagaaatccagcagcacgcaat-agaaaaagtgaaaacattgcagaagtatcatc 4
>gb|AY107433.1| Zea mays PCO148931 mRNA sequence Length = 1033 Score = 135 bits (68), Expect = 2e-28 Identities = 123/140 (87%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 534 gctgaagtgtcatcatcatcttcatcagttagtgtcaatgcatgcccttagtaataggag 593 ||||||||||| || ||||||||||||||||| |||| ||| || | | | |||| ||| Sbjct: 1031 gctgaagtgtcgtcgtcatcttcatcagttagagtcagtgcgtgtc-tcaacaataagag 973 Query: 594 agccattaaaacaagagcagcagaacggcaaaaggcagcagtgctggcattcgtggctga 653 |||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| || Sbjct: 972 agccattaaaacaagagcagcagagcggcagaaggcagcagtgctcgcatttgtggcaga 913 Query: 654 atagtcatcatattcagctt 673 ||| |||||||||||||||| Sbjct: 912 ataatcatcatattcagctt 893
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 308 cttcaaggttgcggttcgtgctggggcgtggcaggagaatctggtgctatggtgaaatgc 367 |||||||| || || |||||||| || |||| || ||||| ||||| |||||||||||| Sbjct: 14621671 cttcaaggctgtggctcgtgctgcggtgtggtcggcgaatccggtgcaatggtgaaatgc 14621612 Query: 368 actcctctcccttgcccagactggaggatgaatgccacctcagttgctgccaacgcagct 427 ||||| | |||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 14621611 actccggttccttgcccagactgaagaatgaatgccacctcagttgctgctaaggcagcc 14621552 Query: 428 gcctcctg 435 |||||||| Sbjct: 14621551 gcctcctg 14621544 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 |||||||| |||||||| ||||| | |||||||||||||||||||||||| || ||||| Sbjct: 14621147 tgtctgcggcgctgcaagatactcactgcccaagccattatatagaatggtagcagaaat 14621088 Query: 500 ccagcagcacgca 512 ||||||||||||| Sbjct: 14621087 ccagcagcacgca 14621075 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 607 agagcagcagaacggcaaaaggcagcagtgctggcattcgtggctgaatagtcatcatat 666 ||||||||||| || ||||| ||||||||||||||||| ||||| || || ||||| ||| Sbjct: 14620770 agagcagcagagcgacaaaaagcagcagtgctggcatttgtggcagagtaatcatcgtat 14620711 Query: 667 tcagctt 673 ||||||| Sbjct: 14620710 tcagctt 14620704 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 524 tgaaaacattgctgaagtgtcatcatcatcttcatcagttagtgtca 570 |||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 14620971 tgaaaacattgcagaagtatcatcgtcatcttcatcagttagagtca 14620925
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 308 cttcaaggttgcggttcgtgctggggcgtggcaggagaatctggtgctatggtgaaatgc 367 |||||||| || || |||||||| || |||| || ||||| ||||| |||||||||||| Sbjct: 43338 cttcaaggctgtggctcgtgctgcggtgtggtcggcgaatccggtgcaatggtgaaatgc 43279 Query: 368 actcctctcccttgcccagactggaggatgaatgccacctcagttgctgccaacgcagct 427 ||||| | |||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 43278 actccggttccttgcccagactgaagaatgaatgccacctcagttgctgctaaggcagcc 43219 Query: 428 gcctcctg 435 |||||||| Sbjct: 43218 gcctcctg 43211 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 |||||||| |||||||| ||||| | |||||||||||||||||||||||| || ||||| Sbjct: 42814 tgtctgcggcgctgcaagatactcactgcccaagccattatatagaatggtagcagaaat 42755 Query: 500 ccagcagcacgca 512 ||||||||||||| Sbjct: 42754 ccagcagcacgca 42742 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 607 agagcagcagaacggcaaaaggcagcagtgctggcattcgtggctgaatagtcatcatat 666 ||||||||||| || ||||| ||||||||||||||||| ||||| || || ||||| ||| Sbjct: 42437 agagcagcagagcgacaaaaagcagcagtgctggcatttgtggcagagtaatcatcgtat 42378 Query: 667 tcagctt 673 ||||||| Sbjct: 42377 tcagctt 42371 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 524 tgaaaacattgctgaagtgtcatcatcatcttcatcagttagtgtca 570 |||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 42638 tgaaaacattgcagaagtatcatcgtcatcttcatcagttagagtca 42592
>ref|XM_482577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1462 Score = 95.6 bits (48), Expect = 2e-16 Identities = 275/348 (79%), Gaps = 2/348 (0%) Strand = Plus / Minus Query: 326 tgctggggcgtggcaggagaatctggtgctatggtgaaatgcactcctctcccttgccca 385 ||||| || |||||||| ||||||||||| |||||||||| || || || | ||| || Sbjct: 1129 tgctgaggtgtggcaggggaatctggtgcgatggtgaaattcatgccccttctttgtcct 1070 Query: 386 gactggaggatgaatgccacctcagttgctgccaacgcagctgcctcctgccgatgtctg 445 ||||| || |||||||||||||||||||| || | ||||| || |||||| | || Sbjct: 1069 gactgtagaatgaatgccacctcagttgcagctagagcagccgctacctgcctccgcctt 1010 Query: 446 cgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaaccagca 505 || | ||| || ||| | |||||||||||||| || |||||||| || ||||| || | Sbjct: 1009 cggccctgtaagatattgattgcccaagccatgatgtagaatggtagcagaaacccggtg 950 Query: 506 gcacgcagtaaggaaaagtgaaaacattgctgaagtgtcatcatcatcttcatcagttag 565 | || |||| | ||||| ||||||||| |||| ||| || ||||||||||||||||| Sbjct: 949 actcgtagta-gaaaaagcaaaaacattgaagaagcgtcgtcttcatcttcatcagttag 891 Query: 566 tgtcaatgcatgcccttagtaataggagagccattaaaacaagagcagcagaacggcaaa 625 | ||| |||| ||| | | || ||||||||||||| ||| |||||||| ||||||| Sbjct: 890 taccaacacatg-cctcaacactaacagagccattaaaataagcgcagcagagcggcaaa 832 Query: 626 aggcagcagtgctggcattcgtggctgaatagtcatcatattcagctt 673 ||||||||| ||| ||||| || ||||||| |||||||| ||||||| Sbjct: 831 aggcagcagagctcgcatttgttactgaataatcatcatagtcagctt 784
>dbj|AK071857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118I21, full insert sequence Length = 1462 Score = 95.6 bits (48), Expect = 2e-16 Identities = 275/348 (79%), Gaps = 2/348 (0%) Strand = Plus / Minus Query: 326 tgctggggcgtggcaggagaatctggtgctatggtgaaatgcactcctctcccttgccca 385 ||||| || |||||||| ||||||||||| |||||||||| || || || | ||| || Sbjct: 1129 tgctgaggtgtggcaggggaatctggtgcgatggtgaaattcatgccccttctttgtcct 1070 Query: 386 gactggaggatgaatgccacctcagttgctgccaacgcagctgcctcctgccgatgtctg 445 ||||| || |||||||||||||||||||| || | ||||| || |||||| | || Sbjct: 1069 gactgtagaatgaatgccacctcagttgcagctagagcagccgctacctgcctccgcctt 1010 Query: 446 cgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaaccagca 505 || | ||| || ||| | |||||||||||||| || |||||||| || ||||| || | Sbjct: 1009 cggccctgtaagatattgattgcccaagccatgatgtagaatggtagcagaaacccggtg 950 Query: 506 gcacgcagtaaggaaaagtgaaaacattgctgaagtgtcatcatcatcttcatcagttag 565 | || |||| | ||||| ||||||||| |||| ||| || ||||||||||||||||| Sbjct: 949 actcgtagta-gaaaaagcaaaaacattgaagaagcgtcgtcttcatcttcatcagttag 891 Query: 566 tgtcaatgcatgcccttagtaataggagagccattaaaacaagagcagcagaacggcaaa 625 | ||| |||| ||| | | || ||||||||||||| ||| |||||||| ||||||| Sbjct: 890 taccaacacatg-cctcaacactaacagagccattaaaataagcgcagcagagcggcaaa 832 Query: 626 aggcagcagtgctggcattcgtggctgaatagtcatcatattcagctt 673 ||||||||| ||| ||||| || ||||||| |||||||| ||||||| Sbjct: 831 aggcagcagagctcgcatttgttactgaataatcatcatagtcagctt 784
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 603 aacaagagcagcagaacggcaaaaggcagcagtgctggcattcgtggctgaatagtcatc 662 ||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 20291 aacaagagcagcagagcggcagaaggcagcagtgctcgcatttgtggcagaataatcatc 20232 Query: 663 atattcagctt 673 ||||||||||| Sbjct: 20231 atattcagctt 20221 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 320 ggttcgtgctggggcgtggcaggagaatctggtgctatggtgaaatgcactcctctccct 379 ||||| ||||| || ||||| || || || ||||| ||||||||||||||||| || ||| Sbjct: 21539 ggttcatgctgtggtgtggccggggagtccggtgcgatggtgaaatgcactccccttcct 21480 Query: 380 tgcccagactggaggatgaatgccacctcagttgctgccaacgcagctgcctcctg 435 || || ||||| ||||||||||||||||| | ||| || | |||||||||||||| Sbjct: 21479 tggcctgactgcaggatgaatgccacctccgctgcagctagagcagctgcctcctg 21424 Score = 73.8 bits (37), Expect = 7e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 |||||||| |||||||| ||||| |||||||||||||| || ||||| || || || ||| Sbjct: 20634 tgtctgcggcgctgcaagatactgattgcccaagccatgatgtagaacggaagcaggaaa 20575 Query: 500 ccagcagcacgca 512 ||||||||||||| Sbjct: 20574 ccagcagcacgca 20562 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 524 tgaaaacattgctgaagtgtcatcatcatcttcatcagttagtgtca 570 ||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 20469 tgaaaacatcgctgaagtgtcgtcgtcatcttcatcagttagagtca 20423
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 326 tgctggggcgtggcaggagaatctggtgctatggtgaaatgcactcctctcccttgccca 385 ||||| || |||||||| ||||||||||| |||||||||| || || || | ||| || Sbjct: 21192556 tgctgaggtgtggcaggggaatctggtgcgatggtgaaattcatgccccttctttgtcct 21192497 Query: 386 gactggaggatgaatgccacctcagttgc 414 ||||| || |||||||||||||||||||| Sbjct: 21192496 gactgtagaatgaatgccacctcagttgc 21192468 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 610 gcagcagaacggcaaaaggcagcagtgctggcattcgtggctgaatagtcatcatattca 669 |||||||| |||||||||||||||| ||| ||||| || ||||||| |||||||| ||| Sbjct: 21191843 gcagcagagcggcaaaaggcagcagagctcgcatttgttactgaataatcatcatagtca 21191784 Query: 670 gctt 673 |||| Sbjct: 21191783 gctt 21191780 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 526 aaaacattgctgaagtgtcatcatcatcttcatcagttagt 566 ||||||||| |||| ||| || |||||||||||||||||| Sbjct: 21192013 aaaacattgaagaagcgtcgtcttcatcttcatcagttagt 21191973
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 326 tgctggggcgtggcaggagaatctggtgctatggtgaaatgcactcctctcccttgccca 385 ||||| || |||||||| ||||||||||| |||||||||| || || || | ||| || Sbjct: 18833 tgctgaggtgtggcaggggaatctggtgcgatggtgaaattcatgccccttctttgtcct 18774 Query: 386 gactggaggatgaatgccacctcagttgc 414 ||||| || |||||||||||||||||||| Sbjct: 18773 gactgtagaatgaatgccacctcagttgc 18745 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 610 gcagcagaacggcaaaaggcagcagtgctggcattcgtggctgaatagtcatcatattca 669 |||||||| |||||||||||||||| ||| ||||| || ||||||| |||||||| ||| Sbjct: 18120 gcagcagagcggcaaaaggcagcagagctcgcatttgttactgaataatcatcatagtca 18061 Query: 670 gctt 673 |||| Sbjct: 18060 gctt 18057 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 526 aaaacattgctgaagtgtcatcatcatcttcatcagttagt 566 ||||||||| |||| ||| || |||||||||||||||||| Sbjct: 18290 aaaacattgaagaagcgtcgtcttcatcttcatcagttagt 18250
>ref|NM_201678.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G02960 transcript variant AT2G02960.5 mRNA, complete cds Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 1126 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 1077
>ref|NM_201676.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G02960 transcript variant AT2G02960.3 mRNA, complete cds Length = 1459 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 1025 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 976
>ref|NM_201677.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G02960 transcript variant AT2G02960.4 mRNA, complete cds Length = 1258 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 824 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 775
>ref|NM_179598.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G02960 transcript variant AT2G02960.2 mRNA, complete cds Length = 1245 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 811 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 762
>ref|NM_126348.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G02960 transcript variant AT2G02960.1 mRNA, complete cds Length = 1249 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 815 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 766
>gb|AY091335.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds Length = 847 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 641 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 592
>gb|AY065284.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds Length = 1245 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 809 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 760
>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete sequence Length = 104016 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 42874 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 42923
>emb|BX820794.1|CNS0A9IB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 1126 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 1077
>emb|BX820739.1|CNS0A9LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZC01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 1025 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 976
>emb|BX821079.1|CNS0A986 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 ||||| || ||||||||||| |||||| |||| |||||||| |||||||| Sbjct: 824 atactgatggcccaagccatgatatagcatggaagaagaaatccagcagc 775
>ref|NM_125640.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G62460 mRNA, complete cds Length = 1310 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 941 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 882 Query: 500 ccagc 504 ||||| Sbjct: 881 ccagc 877
>gb|AY142052.1| Arabidopsis thaliana At5g62460/K19B1_7 mRNA, complete cds Length = 924 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 767 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 708 Query: 500 ccagc 504 ||||| Sbjct: 707 ccagc 703
>gb|AY060581.1| Arabidopsis thaliana AT5g62460/K19B1_7 mRNA, complete cds Length = 1290 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 921 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 862 Query: 500 ccagc 504 ||||| Sbjct: 861 ccagc 857
>emb|BX830110.1|CNS0A02Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1252 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 897 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 838 Query: 500 ccagc 504 ||||| Sbjct: 837 ccagc 833
>emb|BX829421.1|CNS0A023 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 925 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 866 Query: 500 ccagc 504 ||||| Sbjct: 865 ccagc 861
>emb|BX830793.1|CNS09YMH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1274 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 941 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 882 Query: 500 ccagc 504 ||||| Sbjct: 881 ccagc 877
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 440 tgtctgcgacgctgcaatatactaattgcccaagccattatatagaatgggagaagaaaa 499 ||||| ||||| || ||||||||||| ||||||||||| || || | ||||| |||||| Sbjct: 16545 tgtcttcgacgttgtaatatactaatagcccaagccatgatgtaacacgggaggagaaaa 16486 Query: 500 ccagc 504 ||||| Sbjct: 16485 ccagc 16481
>gb|AY103639.1| Zea mays PCO142382 mRNA sequence Length = 1209 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 447 gacgctgcaatatactaattgcccaagccattatatagaatgg 489 ||||||||| |||||||| ||||||||||| |||||| |||| Sbjct: 794 gacgctgcatgatactaatagcccaagccataatatagcatgg 752
>ref|XM_466400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1303 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 |||||||| ||||||||||| |||||| |||| || | ||| |||||||| Sbjct: 705 atactaatagcccaagccatgatatagcatggcagcaaaaatccagcagc 656
>emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on chromosome 13, complete sequence Length = 174591 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 524 tgaaaacattgctgaagtgtcatcat 549 |||||||||||||||| ||||||||| Sbjct: 130747 tgaaaacattgctgaactgtcatcat 130722
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 |||||||| ||||||||||| |||||| |||| || | ||| |||||||| Sbjct: 22183902 atactaatagcccaagccatgatatagcatggcagcaaaaatccagcagc 22183951
>emb|BX841685.1|CNS09YJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 455 aatatactaattgcccaagccattatatagaatgggagaagaaaaccagc 504 ||||||||||| ||||||||||| || || | ||||| ||||||||||| Sbjct: 887 aatatactaatagcccaagccatgatgtaacacgggaggagaaaaccagc 838
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 |||||||| ||||||||||| |||||| |||| || | ||| |||||||| Sbjct: 79746 atactaatagcccaagccatgatatagcatggcagcaaaaatccagcagc 79795
>dbj|AK071239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083D22, full insert sequence Length = 1304 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagc 507 |||||||| ||||||||||| |||||| |||| || | ||| |||||||| Sbjct: 706 atactaatagcccaagccatgatatagcatggcagcaaaaatccagcagc 657
>ref|NM_202667.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.6 mRNA, complete cds Length = 1835 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 1031 atgggaggagaaaaccagcagcacg 1007
>ref|NM_180337.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.2 mRNA, complete cds Length = 1674 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 877 atgggaggagaaaaccagcagcacg 853
>ref|NM_114623.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.3 mRNA, complete cds Length = 1681 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 877 atgggaggagaaaaccagcagcacg 853
>ref|NM_180336.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.1 mRNA, complete cds Length = 1751 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 947 atgggaggagaaaaccagcagcacg 923
>ref|NM_202666.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.5 mRNA, complete cds Length = 1868 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 1071 atgggaggagaaaaccagcagcacg 1047
>ref|NM_202665.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47550 transcript variant AT3G47550.4 mRNA, complete cds Length = 1945 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 1141 atgggaggagaaaaccagcagcacg 1117
>ref|XM_508699.1| PREDICTED: Pan troglodytes similar to hephaestin (LOC451487), mRNA Length = 3897 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 actcaccgagactccctggcc 105 ||||||||||||||||||||| Sbjct: 2428 actcaccgagactccctggcc 2448
>gb|DQ214534.1| Taeniopygia guttata clone 0058P0040D05 fetal globin-inducing factor variant 1-like mRNA, complete sequence Length = 1308 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatcag 561 ||||||||||||||||||||| Sbjct: 125 tgtcatcatcatcttcatcag 105
>ref|XM_526203.1| PREDICTED: Pan troglodytes similar to KIAA0800 protein (LOC470820), mRNA Length = 4650 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 4388 gtgtcatcatcatcttcatca 4368
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 aataacatggctctgcactgg 210 ||||||||||||||||||||| Sbjct: 46507 aataacatggctctgcactgg 46487
>gb|AE009151.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 177 of 256 of the complete sequence Length = 10009 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 gcagaacggcaaaaggcagca 633 ||||||||||||||||||||| Sbjct: 1081 gcagaacggcaaaaggcagca 1061
>gb|AC145991.2| Pan troglodytes BAC clone RP43-170F9 from 7, complete sequence Length = 173879 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 aaggaaaagtgaaaacattgctgaa 539 |||||||| |||||||||||||||| Sbjct: 91857 aaggaaaactgaaaacattgctgaa 91881
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 aataacatggctctgcactgg 210 ||||||||||||||||||||| Sbjct: 19788 aataacatggctctgcactgg 19808
>gb|AC079996.5| Homo sapiens BAC clone RP11-713C12 from 7, complete sequence Length = 116690 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 aaggaaaagtgaaaacattgctgaa 539 |||||||| |||||||||||||||| Sbjct: 40055 aaggaaaactgaaaacattgctgaa 40079
>gb|BC039504.2| Homo sapiens cDNA clone IMAGE:5561426, partial cds Length = 1125 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagtgtcatcatcatcttcat 558 ||||||||||||||||||||| Sbjct: 812 aagtgtcatcatcatcttcat 832
>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33 Contains the SLC2A5 gene for solute carrier family 2 (facilitated glucose/fructose transporter) member 5, two novel genes and two CpG islands, complete sequence Length = 139111 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 364 atgcactcctctcccttgcccagac 388 ||||||||||||||||| ||||||| Sbjct: 54128 atgcactcctctcccttccccagac 54152
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 38349 atgggaggagaaaaccagcagcacg 38325
>emb|AL080145.1|HSM800657 Homo sapiens mRNA; cDNA DKFZp434P113 (from clone DKFZp434P113) Length = 3935 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 3142 gtgtcatcatcatcttcatca 3122
>dbj|AK023239.1| Homo sapiens cDNA FLJ13177 fis, clone NT2RP3003870, highly similar to Homo sapiens mRNA for KIAA0800 protein Length = 2876 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 2242 gtgtcatcatcatcttcatca 2222
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence Length = 170255 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagtgtcatcatcatcttcat 558 ||||||||||||||||||||| Sbjct: 149735 aagtgtcatcatcatcttcat 149715
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 gcagaacggcaaaaggcagca 633 ||||||||||||||||||||| Sbjct: 1953152 gcagaacggcaaaaggcagca 1953132 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ccgctgcctccagccggtcg 291 |||||||||||||||||||| Sbjct: 1015680 ccgctgcctccagccggtcg 1015699
>ref|XM_936724.1| PREDICTED: Homo sapiens hephaestin-like 1 (HEPHL1), mRNA Length = 6175 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 actcaccgagactccctggcc 105 ||||||||||||||||||||| Sbjct: 2398 actcaccgagactccctggcc 2418
>ref|XM_291947.6| PREDICTED: Homo sapiens hephaestin-like 1 (HEPHL1), mRNA Length = 6175 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 actcaccgagactccctggcc 105 ||||||||||||||||||||| Sbjct: 2398 actcaccgagactccctggcc 2418
>emb|BX664625.12| Zebrafish DNA sequence from clone DKEY-286J17 in linkage group 22, complete sequence Length = 142350 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagtt 563 ||||||||||||||||||||| Sbjct: 115605 tcatcatcatcttcatcagtt 115625
>emb|BX823484.1|CNS0A59W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1002 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 atgggagaagaaaaccagcagcacg 510 ||||||| ||||||||||||||||| Sbjct: 580 atgggaggagaaaaccagcagcacg 556
>gb|AF061935.1|AF061935 Homo sapiens HIV-1 Vpr-binding protein (VprBP) mRNA, partial cds Length = 4207 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 3945 gtgtcatcatcatcttcatca 3925
>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence Length = 168499 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 25224 gtgtcatcatcatcttcatca 25244
>dbj|AK173949.1| Ciona intestinalis cDNA, clone:cicl002m06, full insert sequence Length = 1313 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ctttggtgattcatgcaagccagca 259 |||||||||||||||||| |||||| Sbjct: 585 ctttggtgattcatgcaatccagca 561
>dbj|AB018343.1| Homo sapiens mRNA for KIAA0800 protein, partial cds Length = 5984 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 4430 gtgtcatcatcatcttcatca 4410
>gb|BC022792.1| Homo sapiens Vpr (HIV-1) binding protein, mRNA (cDNA clone MGC:23092 IMAGE:4853730), complete cds Length = 4356 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 3114 gtgtcatcatcatcttcatca 3094
>ref|NM_014703.1| Homo sapiens Vpr (HIV-1) binding protein (VPRBP), mRNA Length = 5984 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 4430 gtgtcatcatcatcttcatca 4410
>gb|BC110371.1| Homo sapiens cDNA clone MGC:102804 IMAGE:5547856, complete cds Length = 5954 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 gtgtcatcatcatcttcatca 560 ||||||||||||||||||||| Sbjct: 4387 gtgtcatcatcatcttcatca 4367
>dbj|AP003966.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2508F7, complete sequence Length = 97000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 actcaccgagactccctggcc 105 ||||||||||||||||||||| Sbjct: 7288 actcaccgagactccctggcc 7308
>ref|XM_640757.1| Dictyostelium discoideum hypothetical protein (DDB0190152), partial mRNA Length = 11052 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 10234 tcatcatcatcttcatcagt 10253
>ref|XM_639929.1| Dictyostelium discoideum hypothetical protein (DDB0167953), partial mRNA Length = 3183 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 191 tcatcatcatcttcatcagt 172
>ref|XM_639300.1| Dictyostelium discoideum hypothetical protein (DDB0217446), partial mRNA Length = 3183 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 191 tcatcatcatcttcatcagt 172
>ref|XM_636811.1| Dictyostelium discoideum hypothetical protein (DDB0220593), partial mRNA Length = 4003 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1400 tgtcatcatcatcttcatca 1419
>gb|AC161608.5| Mus musculus BAC clone RP23-146P11 from chromosome 14, complete sequence Length = 198014 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 129453 tcatcatcatcttcatcagt 129472
>gb|DQ149982.1| Bombyx mori chorion specific C/EBP (C/EBP) mRNA, complete cds, alternatively spliced Length = 1993 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 aaaagtgaaaacattgctga 538 |||||||||||||||||||| Sbjct: 1147 aaaagtgaaaacattgctga 1166
>gb|DQ149981.1| Bombyx mori chorion specific C/EBP (C/EBP) mRNA, complete cds, alternatively spliced Length = 1925 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 aaaagtgaaaacattgctga 538 |||||||||||||||||||| Sbjct: 1079 aaaagtgaaaacattgctga 1098
>ref|NM_186038.2| Oryza sativa (japonica cultivar-group), mRNA Length = 998 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 402 gtcatcatcatcttcatcag 383
>ref|XM_506540.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453E03.111 mRNA Length = 1000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 404 gtcatcatcatcttcatcag 385
>ref|NM_144490.1| Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), transcript variant 2, mRNA Length = 5947 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 699 tcatcatcatcttcatcagt 680
>ref|NM_016248.2| Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), transcript variant 1, mRNA Length = 9919 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 699 tcatcatcatcttcatcagt 680
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccgatgtcgccgctgcctcc 282 |||||||||||||||||||| Sbjct: 64532 ccgatgtcgccgctgcctcc 64551
>gb|AF112374.1| Danio rerio odorant receptor gene cluster Length = 140658 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 127174 tcatcatcatcttcatcagt 127155
>gb|BT015285.1| Drosophila melanogaster GH17517 full insert cDNA Length = 8498 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 1398 gtcatcatcatcttcatcag 1379
>ref|XM_423807.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ23518 (LOC426136), partial mRNA Length = 2348 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 739 tgtcatcatcatcttcatca 720
>gb|BC077491.1| Xenopus laevis AND-1 protein, mRNA (cDNA clone IMAGE:4970671), partial cds Length = 2665 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1113 tgtcatcatcatcttcatca 1094
>ref|XM_456704.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A08778g) partial mRNA Length = 2700 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1846 tgtcatcatcatcttcatca 1827
>gb|BC072374.1| Xenopus laevis hypothetical protein MGC84516, mRNA (cDNA clone MGC:84516 IMAGE:5078862), complete cds Length = 4211 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 442 gtcatcatcatcttcatcag 423
>gb|AC092509.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-159G15, complete sequence Length = 90018 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gcaggagaatctggtgctat 357 |||||||||||||||||||| Sbjct: 54003 gcaggagaatctggtgctat 54022
>gb|AE009066.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 92 of 256 of the complete sequence Length = 10606 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ccgctgcctccagccggtcg 291 |||||||||||||||||||| Sbjct: 7865 ccgctgcctccagccggtcg 7884
>ref|XM_708011.1| Candida albicans SC5314 hypothetical protein (CaO19.8340), mRNA Length = 2061 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 150 gtcatcatcatcttcatcag 131
>ref|XM_707988.1| Candida albicans SC5314 hypothetical protein (CaO19.721), mRNA Length = 2061 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 150 gtcatcatcatcttcatcag 131
>gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome 10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 87265 tgtcatcatcatcttcatca 87284
>gb|AC157024.7| Mus musculus 6 BAC RP24-549F4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165219 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 tcatcatcttcatcagttag 565 |||||||||||||||||||| Sbjct: 91801 tcatcatcttcatcagttag 91782
>ref|XM_850942.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 6 (LOC606906), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 599 gtcatcatcatcttcatcag 580
>ref|XM_850904.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 5 (LOC606906), mRNA Length = 1249 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 599 gtcatcatcatcttcatcag 580
>ref|XM_850862.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 4 (LOC606906), mRNA Length = 1314 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 599 gtcatcatcatcttcatcag 580
>ref|XM_850817.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 3 (LOC606906), mRNA Length = 1328 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 599 gtcatcatcatcttcatcag 580
>ref|XM_843238.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 2 (LOC606906), mRNA Length = 1330 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 599 gtcatcatcatcttcatcag 580
>ref|XM_001001499.1| PREDICTED: Mus musculus A kinase (PRKA) anchor protein 11 (Akap11), mRNA Length = 9167 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 482 tcatcatcatcttcatcagt 463
>ref|XM_915278.2| PREDICTED: Mus musculus A kinase (PRKA) anchor protein 11 (Akap11), mRNA Length = 7673 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 482 tcatcatcatcttcatcagt 463
>ref|XM_001002157.1| PREDICTED: Mus musculus A kinase (PRKA) anchor protein 11 (Akap11), mRNA Length = 9167 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 482 tcatcatcatcttcatcagt 463
>gb|AC126251.4| Mus musculus BAC clone RP23-457L16 from chromosome 14, complete sequence Length = 181355 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 4688 tcatcatcatcttcatcagt 4707
>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14, complete sequence Length = 189098 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 13138 tgtcatcatcatcttcatca 13157
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 40.1 bits (20), Expect = 9.2 Identities = 50/60 (83%) Strand = Plus / Minus Query: 458 atactaattgcccaagccattatatagaatgggagaagaaaaccagcagcacgcagtaag 517 ||||| |||||||||||||| |||||| | || | ||||| |||||||| || |||||| Sbjct: 37083 atactgattgcccaagccataatatagcaaggtaagagaaatccagcagctcgaagtaag 37024
>ref|XM_855285.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 5 (LOC608196), mRNA Length = 1245 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 594 gtcatcatcatcttcatcag 575
>ref|XM_855251.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 4 (LOC608196), mRNA Length = 1283 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 551 gtcatcatcatcttcatcag 532
>ref|XM_855222.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 3 (LOC608196), mRNA Length = 1217 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 485 gtcatcatcatcttcatcag 466
>ref|XM_844853.1| PREDICTED: Canis familiaris similar to nucleophosmin 1, transcript variant 1 (LOC608196), mRNA Length = 1327 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 595 gtcatcatcatcttcatcag 576
>emb|Z78421.1|HSN121E8 Human DNA sequence from clone LL22NC03-121E8 on chromosome 22, complete sequence Length = 39372 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 17926 tgtcatcatcatcttcatca 17945
>emb|AL590702.17| Human DNA sequence from clone RP13-371D18 on chromosome 6 Contains the 5' end of a novel gene (CD001, BM-021, FLJ11240), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 113587 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 3863 tcatcatcatcttcatcagt 3882
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagttagt 566 ||||||||||| |||||||||||| Sbjct: 49729 tcatcatcatcgtcatcagttagt 49706
>ref|XM_788738.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5937-PA (LOC589084), partial mRNA Length = 2287 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 274 tcatcatcatcttcatcagt 255
>emb|AL358857.16| Human DNA sequence from clone RP11-452J13 on chromosome 1 Contains a novel gene, complete sequence Length = 117059 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 aatatactaattgcccaagc 474 |||||||||||||||||||| Sbjct: 26430 aatatactaattgcccaagc 26411
>emb|AL139136.17| Human DNA sequence from clone RP11-53I24 on chromosome 1 Contains the 3' end of the CRB1 gene for crumbs homolog 1 (Drosophila) and the 3' end of a novel gene, complete sequence Length = 181596 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 40627 tgtcatcatcatcttcatca 40646
>emb|AL136527.9| Human DNA sequence from clone RP11-215B13 on chromosome 13 Contains the AKAP11 gene for A kinase (PRKA) anchor protein 11, part of a novel gene, a fumarate hydratase (FH) pseudogene, the 3' end of the DGKH gene for diacylglycerol kinase eta and a CpG Island, complete sequence Length = 146853 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 70449 tcatcatcatcttcatcagt 70468
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagttagt 566 ||||||||||| |||||||||||| Sbjct: 136737 tcatcatcatcatcatcagttagt 136714
>ref|XM_776201.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575828 (LOC575828), mRNA Length = 912 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 766 tcatcatcatcttcatcagt 785
>emb|X98884.1|XLAND1PRO X.laevis mRNA for AND-1 protein Length = 3978 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1145 tgtcatcatcatcttcatca 1126
>ref|XM_795030.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581156 (LOC581156), mRNA Length = 441 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 244 tgtcatcatcatcttcatca 225
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 704246 tgtcatcatcatcttcatca 704227
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agtgtcatcatcatcttcat 558 |||||||||||||||||||| Sbjct: 19733 agtgtcatcatcatcttcat 19714
>gb|BC076291.1| Danio rerio zgc:92827, mRNA (cDNA clone MGC:92827 IMAGE:7090712), complete cds Length = 913 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 580 tcatcatcatcttcatcagt 561
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagttagt 566 ||||||||||| |||||||||||| Sbjct: 105727 tcatcatcatcatcatcagttagt 105704
>emb|AL022139.1|DMC65F1 Drosophila melanogaster cosmid clone 65F1 Length = 33000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 24029 gtcatcatcatcttcatcag 24010
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 36964 tcatcatcatcttcatcagt 36945
>emb|BX927262.9| Zebrafish DNA sequence from clone CH211-276D15 in linkage group 5, complete sequence Length = 170455 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 aaggaaaagtgaaaacattg 534 |||||||||||||||||||| Sbjct: 32644 aaggaaaagtgaaaacattg 32663
>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16, complete sequence Length = 132039 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cattgctgaagtgtcatcat 549 |||||||||||||||||||| Sbjct: 102445 cattgctgaagtgtcatcat 102426
>gb|BC074735.2| Homo sapiens hypothetical protein FLJ20054, mRNA (cDNA clone MGC:103810 IMAGE:30915191), complete cds Length = 1096 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 306 tgtcatcatcatcttcatca 287
>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170186 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 135139 gtcatcatcatcttcatcag 135120
>emb|CR627087.1| Homo sapiens mRNA; cDNA DKFZp781I12161 (from clone DKFZp781I12161) Length = 1954 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 862 tcatcatcatcttcatcagt 843
>dbj|AK091207.1| Homo sapiens cDNA FLJ33888 fis, clone CTONG2007417 Length = 3043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1481 tgtcatcatcatcttcatca 1462
>gb|AC007535.3| Homo sapiens 12p13 BAC RPCI11-154I21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161339 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 129609 tgtcatcatcatcttcatca 129590
>dbj|AB158488.1| Sus scrofa TRIM39, FLJ22638, GNL1, CAT56 genes, SLA-11 pseudogene, complete cds Length = 147386 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgcactcctctcccttgccc 384 |||||||||||||||||||| Sbjct: 72035 tgcactcctctcccttgccc 72016
>dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clone: CH230-65K18, complete sequence Length = 193613 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaatggctttgttactttat 73 |||||||||||||||||||| Sbjct: 127515 aaatggctttgttactttat 127496
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161668 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 21574 gtcatcatcatcttcatcag 21555
>gb|AC084209.6| Homo sapiens BAC clone RP11-462C24 from 4, complete sequence Length = 151980 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 8873 tgtcatcatcatcttcatca 8854
>ref|XM_695983.1| PREDICTED: Danio rerio similar to RNA binding motif protein 16 (LOC572283), mRNA Length = 2584 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gagaagaaaaccagcagcac 509 |||||||||||||||||||| Sbjct: 1078 gagaagaaaaccagcagcac 1097
>gb|U53466.2|U53466 Cydia pomonella granulovirus, complete genome Length = 123500 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 20387 tgtcatcatcatcttcatca 20406
>dbj|AK158300.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930102B02 product:similar to A-kinase anchor protein 11 (Protein kinase A anchoring protein 11) (PRKA11) (A kinase anchor protein 220 kDa) (AKAP 220) (hAKAP220) [Homo sapiens], full insert sequence Length = 1370 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 655 tcatcatcatcttcatcagt 636
>gb|AY283928.2| Bacteriophage KVP40, complete genome Length = 244834 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 acactcagggcaatgacgta 180 |||||||||||||||||||| Sbjct: 119757 acactcagggcaatgacgta 119738
>gb|AC012169.8|AC012169 Homo sapiens chromosome 15 clone RP11-522G20 map 15q21.2, complete sequence Length = 180722 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 34974 tgtcatcatcatcttcatca 34993
>ref|NM_001029734.1| Caenorhabditis elegans T13H2.5b (T13H2.5) mRNA, complete cds Length = 3279 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 catcatcatcttcatcagtt 563 |||||||||||||||||||| Sbjct: 709 catcatcatcttcatcagtt 690
>ref|NM_001029733.1| Caenorhabditis elegans T13H2.5a (T13H2.5) mRNA, complete cds Length = 7538 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 catcatcatcttcatcagtt 563 |||||||||||||||||||| Sbjct: 4846 catcatcatcttcatcagtt 4827
>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence Length = 220216 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 125871 tcatcatcatcttcatcagt 125890
>gb|U39653.1| Caenorhabditis elegans cosmid T13H2, complete sequence Length = 37206 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 catcatcatcttcatcagtt 563 |||||||||||||||||||| Sbjct: 6105 catcatcatcttcatcagtt 6124
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agtgtcatcatcatcttcat 558 |||||||||||||||||||| Sbjct: 19733 agtgtcatcatcatcttcat 19714
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 27889733 gtcatcatcatcttcatcag 27889714
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccgatgtcgccgctgcctcc 282 |||||||||||||||||||| Sbjct: 25830590 ccgatgtcgccgctgcctcc 25830609
>gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394B5 map 15q21.2, complete sequence Length = 189796 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 140946 tgtcatcatcatcttcatca 140965
>ref|NM_019049.1| Homo sapiens hypothetical protein FLJ20054 (FLJ20054), mRNA Length = 2035 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 457 tgtcatcatcatcttcatca 438
>gb|AC087255.1|AC087255 Caenorhabditis briggsae cosmid CB021H06, complete sequence Length = 110191 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 9899 tcatcatcatcttcatcagt 9918
>gb|AC009495.5| Homo sapiens BAC clone RP11-490I2 from 2, complete sequence Length = 134174 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 aagtgtcatcatcatcttcatcag 561 |||||||||||||||| ||||||| Sbjct: 96391 aagtgtcatcatcatcatcatcag 96368
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 37519 tcatcatcatcttcatcagt 37538
>gb|AC055717.36| Homo sapiens 12 BAC RP11-572C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204425 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 caacgcagctgcctcctgcc 437 |||||||||||||||||||| Sbjct: 131232 caacgcagctgcctcctgcc 131213
>ref|XM_236685.3| PREDICTED: Rattus norvegicus solute carrier family 22 (organic cation transporter), member 13 (predicted) (Slc22a13_predicted), mRNA Length = 1681 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gtgtcatcatcatcttcatc 559 |||||||||||||||||||| Sbjct: 1236 gtgtcatcatcatcttcatc 1255
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 53091 gtcatcatcatcttcatcag 53072
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ccgctgcctccagccggtcg 291 |||||||||||||||||||| Sbjct: 2908179 ccgctgcctccagccggtcg 2908198
>dbj|AK121942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107E20, full insert sequence Length = 1028 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 405 gtcatcatcatcttcatcag 386
>dbj|AK000061.1| Homo sapiens cDNA FLJ20054 fis, clone COL00849 Length = 2035 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 457 tgtcatcatcatcttcatca 438
>dbj|AK098892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M09, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 402 gtcatcatcatcttcatcag 383
>gb|AF176555.1|AF176555 Homo sapiens A-kinase anchoring protein 220 mRNA, complete cds Length = 9923 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 699 tcatcatcatcttcatcagt 680
>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol precursor -orf2, putative Fourf gag/pol protein, putative NADP-dependent malic enzyme, putative argonaute protein, putative pinhead protein, putative pol protein, putative gag protein, putative TNP2, r1-B73 proteins, putative genetic modifier, putative S-receptor kinase, putative aldose reductase-related protein, putative glutathione peroxidase, putative glycerol 3-phosphate permease, putative response regulator, and putative 4-coumarate-CoA ligase-like protein genes, complete cds Length = 290350 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 tgaagtgtcatcatcatcttcatc 559 |||||||||||||||||| ||||| Sbjct: 248791 tgaagtgtcatcatcatcatcatc 248814
>dbj|AK061761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B01, full insert sequence Length = 1000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 404 gtcatcatcatcttcatcag 385
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 4942 gtcatcatcatcttcatcag 4923
>dbj|D12821.1|RICEF1B Oryza sativa (japonica cultivar-group) mRNA for elongation factor 1 beta', complete cds Length = 956 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gtcatcatcatcttcatcag 561 |||||||||||||||||||| Sbjct: 363 gtcatcatcatcttcatcag 344
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 tgaagtgtcatcatcatcttcatc 559 ||||||||||| |||||||||||| Sbjct: 1478999 tgaagtgtcataatcatcttcatc 1479022
>gb|BC110708.1| Xenopus laevis AND-1 protein, mRNA (cDNA clone MGC:130701 IMAGE:7202123), complete cds Length = 4031 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tgtcatcatcatcttcatca 560 |||||||||||||||||||| Sbjct: 1193 tgtcatcatcatcttcatca 1174
>emb|AL845428.5| Zebrafish DNA sequence from clone CH211-133D24 in linkage group 20, complete sequence Length = 157787 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcatcatcatcttcatcagt 562 |||||||||||||||||||| Sbjct: 27198 tcatcatcatcttcatcagt 27217
>gb|L02529.1|RATFRZZH Rattus norvegicus Drosophila polarity gene (frizzled) homologue mRNA, complete cds Length = 4540 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgtcggctatattttaagtt 26 |||||||||||||||||||| Sbjct: 357 tgtcggctatattttaagtt 338 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,928,748 Number of Sequences: 3902068 Number of extensions: 6928748 Number of successful extensions: 209196 Number of sequences better than 10.0: 167 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 208352 Number of HSP's gapped (non-prelim): 839 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
