| Clone Name | rbasd2o18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GAT2_YEAST (P40209) Protein GAT2 | 32 | 1.2 | 2 | YEAG_ECOLI (P0ACY3) Hypothetical protein yeaG | 30 | 4.4 | 3 | YEAG_ECOL6 (P0ACY4) Hypothetical protein yeaG | 30 | 4.4 | 4 | YEAG_ECO57 (P0ACY5) Hypothetical protein yeaG | 30 | 4.4 | 5 | YR791_MIMIV (Q5UQ04) Putative ankyrin repeat protein R791 | 30 | 5.8 | 6 | TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily memb... | 29 | 9.9 |
|---|
>GAT2_YEAST (P40209) Protein GAT2| Length = 560 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = +2 Query: 365 AQLYIHISHNVNGLHSQMGISHIYYNSILNQINIPXNXDCHVEMXHYIIVA*QQ-----Q 529 A Y H ++N N HS I + NS+L +NI + + H H I A Q+ Sbjct: 69 AYYYHHPNNNDNNNHSNNTIKNNNINSVLPAVNIQISNNSHYRNTHQIPSAPQRLVSIIP 128 Query: 530 DPH 538 DPH Sbjct: 129 DPH 131
>YEAG_ECOLI (P0ACY3) Hypothetical protein yeaG| Length = 644 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = -3 Query: 332 PDMG*FCSHRKGSQWVHSENNRNPQAFSDTTLLIF*GGSLYEQYCLCSQHGLFIWKPLQH 153 P G +H S+WV NN+N +AF D ++ YCL + I++ L + Sbjct: 294 PFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIV------KVPYCLRISEEIKIYEKLLN 347 Query: 152 LNIMFRLSHCQC 117 + L+H C Sbjct: 348 HS---ELTHAPC 356
>YEAG_ECOL6 (P0ACY4) Hypothetical protein yeaG| Length = 644 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = -3 Query: 332 PDMG*FCSHRKGSQWVHSENNRNPQAFSDTTLLIF*GGSLYEQYCLCSQHGLFIWKPLQH 153 P G +H S+WV NN+N +AF D ++ YCL + I++ L + Sbjct: 294 PFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIV------KVPYCLRISEEIKIYEKLLN 347 Query: 152 LNIMFRLSHCQC 117 + L+H C Sbjct: 348 HS---ELTHAPC 356
>YEAG_ECO57 (P0ACY5) Hypothetical protein yeaG| Length = 644 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = -3 Query: 332 PDMG*FCSHRKGSQWVHSENNRNPQAFSDTTLLIF*GGSLYEQYCLCSQHGLFIWKPLQH 153 P G +H S+WV NN+N +AF D ++ YCL + I++ L + Sbjct: 294 PFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIV------KVPYCLRISEEIKIYEKLLN 347 Query: 152 LNIMFRLSHCQC 117 + L+H C Sbjct: 348 HS---ELTHAPC 356
>YR791_MIMIV (Q5UQ04) Putative ankyrin repeat protein R791| Length = 287 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = +2 Query: 275 FLNEPTEILFCVNKINPYQATXFFFHRIHPAQLYIHISHNVNGLHS--QMGISHI 433 +LN PTEI C+ K++ F + L+ HN N LH + G HI Sbjct: 2 YLNIPTEIWLCILKMDIDSTINLLFTNKYFFDLFEFAKHNFNVLHEVIKRGYVHI 56
>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily m Length = 282 Score = 29.3 bits (64), Expect = 9.9 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = -3 Query: 323 G*FCSHRKGSQWVHSENNRNPQAFSDTTLLIF*GGSLYEQYCLCSQHGLFIWKPLQHLNI 144 G +C+++ S V++ N+R PQ L++ G + YC Q +W +L Sbjct: 200 GQYCNNQPLSHKVYTRNSRYPQ-----DLVLMEGKMM--NYCTTGQ----MWARSSYLGA 248 Query: 143 MFRLSHCQCLYLNSS 99 +F L+ LY+N S Sbjct: 249 VFNLTSADHLYVNVS 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,582,795 Number of Sequences: 219361 Number of extensions: 1646391 Number of successful extensions: 2533 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2533 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)