ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC044123.1| Xenopus laevis alpha-subunit of G-protein, type G... 36 8.0
2emb|X56090.1|XLGAI3 X. laevis mRNA for alpha-subunit of G-protei... 36 8.0

>gb|BC044123.1| Xenopus laevis alpha-subunit of G-protein, type G-alpha-i-3, mRNA
            (cDNA clone MGC:53612 IMAGE:4684144), complete cds
          Length = 2181

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 23/25 (92%)
 Strand = Plus / Minus

                                     
Query: 1    cacattaagnagtgtaaaatacatt 25
            ||||||||| | |||||||||||||
Sbjct: 1987 cacattaaggaatgtaaaatacatt 1963



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>emb|X56090.1|XLGAI3 X. laevis mRNA for alpha-subunit of G-protein, type G-alpha-i-3,
            partial cds
          Length = 2015

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 23/25 (92%)
 Strand = Plus / Minus

                                     
Query: 1    cacattaagnagtgtaaaatacatt 25
            ||||||||| | |||||||||||||
Sbjct: 1899 cacattaaggaatgtaaaatacatt 1875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 130,398
Number of Sequences: 3902068
Number of extensions: 130398
Number of successful extensions: 21952
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21950
Number of HSP's gapped (non-prelim): 2
length of query: 56
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 36
effective length of database: 17,155,003,908
effective search space: 617580140688
effective search space used: 617580140688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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