| Clone Name | rbasd2i13 |
|---|---|
| Clone Library Name | barley_pub |
>YXX5_CAEEL (Q18179) Putative neuropeptide Y receptor (NPY-R)| Length = 455 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 160 SVMHIYDRHNLVASGSNTSFSILHTF*LVEAALLVISYA 276 +V HI++ LV S S T+FSI H + A L + YA Sbjct: 288 NVFHIFNTFELVNSFSVTTFSICHCLAMCSACLNPLIYA 326
>HS90A_HORSE (Q9GKX7) Heat shock protein HSP 90-alpha (HSP 86) (Fragment)| Length = 719 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 560 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 588
>HS90A_CHICK (P11501) Heat shock protein HSP 90-alpha| Length = 728 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 566 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 594
>HS90A_PIG (O02705) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 570 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 598
>HS90A_MOUSE (P07901) Heat shock protein HSP 90-alpha (HSP 86) (Tumor-specific| transplantation 86 kDa antigen) (TSTA) Length = 732 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 570 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 598
>HS90A_CRIGR (P46633) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 570 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 598
>HS90A_HUMAN (P07900) Heat shock protein HSP 90-alpha (HSP 86) (NY-REN-38| antigen) Length = 731 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 236 NVCKIENEVFEPEATKLCLSYMCITDYCC 150 N+CKI ++ E + K+ +S +T CC Sbjct: 569 NLCKIMKDILEKKVEKVVVSNRLVTSPCC 597 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,165,791 Number of Sequences: 219361 Number of extensions: 726320 Number of successful extensions: 1538 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1538 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)