ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TECT2_RAT (Q3B7D3) Tectonic-2 precursor 32 1.5
2REGB_BPT4 (P13312) Ribonuclease (EC 3.1.-.-) (Gp61.9) 30 5.9

>TECT2_RAT (Q3B7D3) Tectonic-2 precursor|
          Length = 700

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 191 WKLEFRYCNPQKTLVLSSYDLIKQAKCLVGRSHKTPCLAPLNFSV*VY 48
           WK    +C+P +T   S    I Q   LV  SH   CLA L   V +Y
Sbjct: 98  WKRGLDWCSPDETASFSEAPCIVQT-LLVSASHNASCLAHLLIQVEIY 144



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>REGB_BPT4 (P13312) Ribonuclease (EC 3.1.-.-) (Gp61.9)|
          Length = 153

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 527 DFGKSLEPEPGRCRRTDGKKWRCWRKTIPNEKY 429
           DF   +E  PGR   TDG  W  +    PNEK+
Sbjct: 92  DFIDGVEYRPGRLEITDGNLWLGFTVCKPNEKF 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,060,698
Number of Sequences: 219361
Number of extensions: 1446653
Number of successful extensions: 4146
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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