ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd2d24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 420 bits (212), Expect = e-114 Identities = 268/287 (93%) Strand = Plus / Minus Query: 246 atactaactacatgacgggataagcaccgtacatggccatgccacacagcccgcggggcc 305 ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 1153 atactaactacatgacggggtaggcaccgtacatggcgatgccacacagcccgcggggcc 1094 Query: 306 cgtcggctcccctacgcatgaagaagaagccattctggccccacgtctggccccacgagt 365 ||||||||||||| |||| |||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1093 cgtcggctcccctgcgcacgaagaagaagcccttctgaccccaggtctgtccccacgagt 1034 Query: 366 tcttggcgatccagtactcttctcctgcgccggtgaccccgtagccgaccaccgtcacca 425 ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1033 tcttggcgatccagtactcttctccggcaccggtgactccgtagccgaccaccgtcacca 974 Query: 426 cgtggttctggctggtggtgcacggccccttgtacacgccggacttgtagttctgcagca 485 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | Sbjct: 973 cgtggttctggctggtggtgcacggccccctgtacacgccggacttgtagtcctgcagga 914 Query: 486 cggagccgctcccgtcgatctggacggtcaccggcgtnctgagcacg 532 ||| ||||||||||||||||||||||||||||||| | | ||||||| Sbjct: 913 cggggccgctcccgtcgatctggacggtcaccggcctcccgagcacg 867
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 983 ccccacgtcttgccccacgagttcttggctatccagtact 944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 12728727 ccccacgtcttgccccacgagttcttggctatccagtact 12728766 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagtact 383 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 6395235 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 6395280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||||||||||||||||||| Sbjct: 6400964 gccccacgagttcttggcgatccagtact 6400936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 13826295 ccccacgtctttccccacgagttcttggcgacccagtact 13826256 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 39495697 gccccacgagttcttgacgatccagtactc 39495668 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 13843214 ccacgagttcttggcgatccagtact 13843189 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 13821085 ccacgagttcttggcgatccagtact 13821110 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 12735936 ccacgagttcttggcgatccagtact 12735911 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 13830962 ccccacgtcttaccccacgagttcttggccagccagtact 13831001 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cattaatgcatcttatttta 211 |||||||||||||||||||| Sbjct: 6143689 cattaatgcatcttatttta 6143670
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 9126 ccccacgtcttgccccacgagttcttggctatccagtact 9165 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 16335 ccacgagttcttggcgatccagtact 16310
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 95756 ccccacgtcttgccccacgagttcttggctatccagtact 95795 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 102965 ccacgagttcttggcgatccagtact 102940
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1052 ccccacttctcgccccacgagttcttggcgatccagtact 1013
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagtact 383 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 965 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 920
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagtact 383 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 17630 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 17675 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||||||||||||||||||| Sbjct: 23359 gccccacgagttcttggcgatccagtact 23331
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagtact 383 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 166301 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 166346 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||||||||||||||||||| Sbjct: 172030 gccccacgagttcttggcgatccagtact 172002
>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA Length = 1101 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||||||||||||||||||| Sbjct: 999 gccccacgagttcttggcgatccagtact 971
>gb|AY253445.1| Triticum aestivum P9346A1-2-5-1 putative thiol protease mRNA, partial cds Length = 560 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtactc 384 |||||| ||| ||||||||||||| |||||||||||||||| Sbjct: 429 ccccacttctcgccccacgagttcctggcgatccagtactc 389
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 938 ccccacgtctttccccacgagttcttggcgacccagtact 899
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 63698 ccccacgtctttccccacgagttcttggcgacccagtact 63659 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 80617 ccacgagttcttggcgatccagtact 80592 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 58488 ccacgagttcttggcgatccagtact 58513 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 68365 ccccacgtcttaccccacgagttcttggccagccagtact 68404
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagta 381 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 637 ttctcgccccacttctcgccccacgagttcttgacgatccagta 594
>gb|M95060.1|MZEORFA Zea mays putative thiol protease homolog mRNA, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 338 ttctggccccacgtctggccccacgagttcttggcgatccagta 381 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 112 ttctcgccccacttctcgccccacgagttcttgacgatccagta 69
>ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 999 ccacgagttcttggcgatccagtact 974
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 960 gccccacgagttcttgacgatccagtactc 931
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 50139 gccccacgagttcttgacgatccagtactc 50110
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 70711 gccccacgagttcttgacgatccagtactc 70682
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 ccacgagttcttggcgatccagtact 383 |||||||||||||||||||||||||| Sbjct: 3516 ccacgagttcttggcgatccagtact 3491
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 1924 gccccacgagttcttgacgatccagtactc 1895
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 970 gccccacgagttcttgacgatccagtactc 941
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtactc 384 |||||||||||||||| ||||||||||||| Sbjct: 1886 gccccacgagttcttgacgatccagtactc 1857
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 34062 gccccacgagttcttgacgatccagtact 34034
>emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chromosome 9, complete sequence Length = 233365 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaacaata 101 ||||||||||||||||||||||||| Sbjct: 186282 cacacacatatatatagtaacaata 186258
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 1074 gccccacgagttcttgacgatccagtact 1046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 8298338 gccccacgagttcttgacgatccagtact 8298366 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 agccgctcccgtcgatctggacgg 512 ||||||||| |||||||||||||| Sbjct: 7706990 agccgctccggtcgatctggacgg 7707013
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 1080 gccccacgagttcttgacgatccagtact 1052
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 2596 gccccacgagttcttgacgatccagtact 2568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 355 gccccacgagttcttggcgatccagtact 383 |||||||||||||||| |||||||||||| Sbjct: 8369101 gccccacgagttcttgacgatccagtact 8369129 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 agccgctcccgtcgatctggacgg 512 ||||||||| |||||||||||||| Sbjct: 7777077 agccgctccggtcgatctggacgg 7777100
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 344 ccccacgtctggccccacgagttcttggcgatccagtact 383 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 935 ccccacgtcttaccccacgagttcttggccagccagtact 896
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 ccccacgagttcttggcgatccagtact 383 ||||||||||||||| |||||||||||| Sbjct: 152882 ccccacgagttcttgacgatccagtact 152855
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 354 ggccccacgagttcttggcgatccagta 381 ||||||||||||||||| |||||||||| Sbjct: 1052 ggccccacgagttcttgacgatccagta 1025
>ref|XM_346301.2| PREDICTED: Rattus norvegicus similar to ankyrin repeat and SOCS box-containing protein 9 (LOC367785), mRNA Length = 1137 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 ttctgcagcacggagccgctccc 498 ||||||||||||||||||||||| Sbjct: 524 ttctgcagcacggagccgctccc 546
>dbj|AB091669.1| Pandalus borealis PbCys mRNA for crustapain, complete cds Length = 1242 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 356 ccccacgagttcttggcgatccagtactcttctcc 390 ||||||||||||||| |||||||||| ||| |||| Sbjct: 890 ccccacgagttcttgacgatccagtaatctcctcc 856
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 ccgtacatggccatgccacacagccc 297 ||||||||||| |||||||||||||| Sbjct: 22154171 ccgtacatggcaatgccacacagccc 22154196 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ccccacgagttcttggcgatccagtact 383 |||||||||||||| |||||||||||| Sbjct: 22126325 ccccacgagttcttaacgatccagtact 22126352 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ccccacgagttcttggcgatccagtact 383 ||||||||||||||| ||||||||||| Sbjct: 22050555 ccccacgagttcttgatgatccagtact 22050582 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ccccacgagttcttggcgatccagtact 383 |||||||||||||| |||||||||||| Sbjct: 18948275 ccccacgagttcttcacgatccagtact 18948302
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 ccgtacatggccatgccacacagccc 297 ||||||||||| |||||||||||||| Sbjct: 75664 ccgtacatggcaatgccacacagccc 75689 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ccccacgagttcttggcgatccagtact 383 |||||||||||||| |||||||||||| Sbjct: 47818 ccccacgagttcttaacgatccagtact 47845
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>gb|DQ079995.1| Drosophila simulans male accessory gland protein (CG4847) mRNA, partial cds Length = 1086 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 cccacgagttcttggcgatccagta 381 |||||||||||||| |||||||||| Sbjct: 997 cccacgagttcttgacgatccagta 973
>emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in linkage group 16, complete sequence Length = 162349 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 87049 gcacttacatttaaaaataca 87069
>emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21, complete sequence Length = 146026 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 18234 gcacttacatttaaaaataca 18214
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 27868939 gccccacgagttcctgacgatccagtact 27868911
>emb|BX323052.5| Zebrafish DNA sequence from clone CH211-234A12 in linkage group 24, complete sequence Length = 173982 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 119848 gcacttacatttaaaaataca 119828
>emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 in linkage group 4, complete sequence Length = 216208 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 213477 gcacttacatttaaaaataca 213457
>emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, complete sequence Length = 211331 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 24292 gcacttacatttaaaaataca 24312
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 77017 gccccacgagttcctgacgatccagtact 76989
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 ggccccacgagttcttggcgatccagtac 382 ||||||||||||||||| |||||||||| Sbjct: 733 ggccccacgagttcttgatgatccagtac 705
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 ggccccacgagttcttggcgatccagtac 382 ||||||||||||||||| |||||||||| Sbjct: 1489 ggccccacgagttcttgatgatccagtac 1461
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 955 gccccacgagttcctgacgatccagtact 927
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7, complete sequence Length = 144689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 95164 gcacttacatttaaaaataca 95144
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtact 383 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>emb|AL714005.17| Zebrafish DNA sequence from clone BUSM1-13F19 in linkage group 9, complete sequence Length = 104829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 43153 gcacttacatttaaaaataca 43173
>emb|AL928944.8| Zebrafish DNA sequence from clone DKEYP-2H4 in linkage group 8, complete sequence Length = 55565 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 7719 gcacttacatttaaaaataca 7739
>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence Length = 136892 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gcacttacatttaaaaataca 38 ||||||||||||||||||||| Sbjct: 76182 gcacttacatttaaaaataca 76162
>ref|NM_105073.2| Arabidopsis thaliana WRKY56; transcription factor AT1G64000 (WRKY56) mRNA, complete cds Length = 888 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 65 cacacacatatatatagtaa 84
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 158158 cacacacatatatatagtaa 158177
>ref|XM_528595.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 13J1 (LOC473225), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tctgcagcacggagccgctc 496 |||||||||||||||||||| Sbjct: 68 tctgcagcacggagccgctc 87
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 1023 gccccacgagttcttgatgatccagtac 996
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cggtgaccccgtagccgacc 415 |||||||||||||||||||| Sbjct: 1075 cggtgaccccgtagccgacc 1056
>gb|BT017224.1| Zea mays clone EL01N0302C04.c mRNA sequence Length = 617 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cggtgaccccgtagccgacc 415 |||||||||||||||||||| Sbjct: 187 cggtgaccccgtagccgacc 168
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 28661 cacacacatatatatagtaa 28680
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 agccgctcccgtcgatctggacgg 512 ||||||||| |||||||||||||| Sbjct: 9277 agccgctccggtcgatctggacgg 9254
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 agccgctcccgtcgatctggacgg 512 ||||||||| |||||||||||||| Sbjct: 109965 agccgctccggtcgatctggacgg 109942
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aagcatacacatcataatat 67 |||||||||||||||||||| Sbjct: 19416 aagcatacacatcataatat 19397
>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 320187 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatgcatcttattttaatag 215 |||||||||||||||||||| Sbjct: 110251 aatgcatcttattttaatag 110270
>ref|XM_757119.1| Ustilago maydis 521 hypothetical protein (UM06065.1) partial mRNA Length = 2055 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gcgatccagtactcttctcc 390 |||||||||||||||||||| Sbjct: 551 gcgatccagtactcttctcc 532
>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence Length = 202404 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaccacacacatatatata 92 |||||||||||||||||||| Sbjct: 120086 gaaccacacacatatatata 120105
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 ggccccacgagttcttggcgatccagta 381 |||||||||||||||| |||||||||| Sbjct: 820 ggccccacgagttcttcacgatccagta 793
>emb|BX842679.19| Human DNA sequence from clone XXyac-155B6 on chromosome 1 Contains a novel gene and a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene, a profilin 1 (PFN1) pseudogene, the gene for a novel protein similar to chromosome 19 open reading frame 27 (C19orf27) and two novel genes, complete sequence Length = 163898 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 28875 cacacacatatatatagtaa 28856
>emb|AL646103.3| Human DNA sequence from clone RP11-165L6 on chromosome 13, complete sequence Length = 56712 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 16920 cacacacatatatatagtaa 16901
>emb|AL513348.12| Human DNA sequence from clone RP11-476H20 on chromosome 1 Contains a novel gene, complete sequence Length = 138641 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaccacacacatatatata 92 |||||||||||||||||||| Sbjct: 38692 gaaccacacacatatatata 38711
>emb|AL356004.9| Human DNA sequence from clone RP11-94I2 on chromosome 1 Contains the 3' end of the gene for a novel protein similar to putative G-protein coupled receptor SH120, the gene for a novel protein similar to PDZ domain containing 1 PDZK1, a novel gene, a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene and three CpG islands, complete sequence Length = 166098 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 127192 cacacacatatatatagtaa 127173
>emb|AL133348.8| Human DNA sequence from clone RP1-79P11 on chromosome Xq21.32-22.1 Contains the gene for X-linked protein and a CpG island, complete sequence Length = 40584 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 30404 cacacacatatatatagtaa 30385
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 2163 gccccacgagttcttcacgatccagtac 2136
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 21955 gccccacgagttcttgatgatccagtac 21928
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acatgacgggataagcaccg 274 |||||||||||||||||||| Sbjct: 130625 acatgacgggataagcaccg 130644
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 1026 gccccacgagttcttcacgatccagtac 999
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 562 gccccacgagttcttcacgatccagtac 535
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gcatcttattttaatagcacatta 222 |||| ||||||||||||||||||| Sbjct: 51108 gcattttattttaatagcacatta 51085
>gb|AC182687.2| Populus trichocarpa clone Pop1-39C16, complete sequence Length = 75303 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaccacacacatatatata 92 |||||||||||||||||||| Sbjct: 69070 gaaccacacacatatatata 69089
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 933 gccccacgagttcttcacgatccagtac 906
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 936 gccccacgagttcttcacgatccagtac 909
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 984 gccccacgagttcttcacgatccagtac 957
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 1102 gccccacgagttcttcacgatccagtac 1075
>emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 in linkage group 23, complete sequence Length = 171113 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cacttacatttaaaaataca 38 |||||||||||||||||||| Sbjct: 88909 cacttacatttaaaaataca 88890
>gb|AC145297.3| Mus musculus BAC clone RP24-196O7 from chromosome 10, complete sequence Length = 172595 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 83801 cacacacatatatatagtaa 83820
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 27756 gccccacgagttcttcacgatccagtac 27729
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 1291 gccccacgagttcttcacgatccagtac 1264
>emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on chromosome X, complete sequence Length = 122633 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 76722 cacacacatatatatagtaa 76741
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acatgacgggataagcaccg 274 |||||||||||||||||||| Sbjct: 18662759 acatgacgggataagcaccg 18662778 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 14184189 gccccacgagttcttgatgatccagtac 14184162
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 1708506 cacacacatatatatagtaa 1708525
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cacacatatatatagtaaca 98 |||||||||||||||||||| Sbjct: 21018144 cacacatatatatagtaaca 21018163
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acatgacgggataagcaccg 274 |||||||||||||||||||| Sbjct: 11897 acatgacgggataagcaccg 11916
>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 catatatatagtaacaatat 102 |||||||||||||||||||| Sbjct: 133767 catatatatagtaacaatat 133786
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 103526 cacacacatatatatagtaa 103507
>gb|AY088461.1| Arabidopsis thaliana clone 6858 mRNA, complete sequence Length = 888 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 65 cacacacatatatatagtaa 84
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cattaatgcatcttatttta 211 |||||||||||||||||||| Sbjct: 5887 cattaatgcatcttatttta 5868
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cattaatgcatcttatttta 211 |||||||||||||||||||| Sbjct: 168046 cattaatgcatcttatttta 168027
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 111677 cacacacatatatatagtaa 111696
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 33655 cacacacatatatatagtaa 33674
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ccccacgagttcttggcgatccagtact 383 ||||||||||||||| ||||||||||| Sbjct: 92619 ccccacgagttcttgatgatccagtact 92646
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cacacatatatatagtaaca 98 |||||||||||||||||||| Sbjct: 141616 cacacatatatatagtaaca 141635
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cacacatatatatagtaaca 98 |||||||||||||||||||| Sbjct: 19889 cacacatatatatagtaaca 19908
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 1591 gccccacgagttcttgatgatccagtac 1564
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 ccccacgagttcttggcgatccagtact 383 ||||||||||||||| ||||||||||| Sbjct: 602 ccccacgagttcttgatgatccagtact 575
>gb|AC004459.1|AC004459 Homo sapiens BAC clone CTA-273G1 from 8q21, complete sequence Length = 41798 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatgcatcttattttaatag 215 |||||||||||||||||||| Sbjct: 12236 aatgcatcttattttaatag 12255
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 ccccacgagttcttggcgatccagtact 383 |||||||||||||| |||||||||||| Sbjct: 1000 ccccacgagttcttcacgatccagtact 973
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 ccccacgagttcttggcgatccagtact 383 |||||||||||||| |||||||||||| Sbjct: 1009 ccccacgagttcttcacgatccagtact 982
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cacacatatatatagtaaca 98 |||||||||||||||||||| Sbjct: 123312 cacacatatatatagtaaca 123331
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 46217 cacacacatatatatagtaa 46236
>emb|BX470096.16| Zebrafish DNA sequence from clone DKEY-163O15 in linkage group 19, complete sequence Length = 111728 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 37813 cacacacatatatatagtaa 37832
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 cggtgaccccgtagccgacc 415 |||||||||||||||||||| Sbjct: 371 cggtgaccccgtagccgacc 390
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 acgagttcttggcgatccagtact 383 ||||||||||| |||||||||||| Sbjct: 1035 acgagttcttgacgatccagtact 1012
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 accatgatataatactaactacat 258 ||||| |||||||||||||||||| Sbjct: 96723 accataatataatactaactacat 96700
>emb|CR450837.12| Zebrafish DNA sequence from clone CH211-51L13 in linkage group 16, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cacttacatttaaaaataca 38 |||||||||||||||||||| Sbjct: 127993 cacttacatttaaaaataca 128012
>emb|BX538329.1|HSM806598 Homo sapiens mRNA; cDNA DKFZp686L14188 (from clone DKFZp686L14188) Length = 3819 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aatgcatcttattttaatag 215 |||||||||||||||||||| Sbjct: 293 aatgcatcttattttaatag 274
>emb|CR848667.23| Zebrafish DNA sequence from clone CH211-257P13 in linkage group 15, complete sequence Length = 157566 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tatatatagtaacaatatcg 104 |||||||||||||||||||| Sbjct: 134785 tatatatagtaacaatatcg 134804
>gb|AC135634.4| Mus musculus BAC clone RP23-121I20 from 9, complete sequence Length = 209177 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 71522 cacacacatatatatagtaa 71541
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 ||||||||||||||| ||||||||||| Sbjct: 1136 gccccacgagttcttcacgatccagtac 1109
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 gccccacgagttcttggcgatccagtac 382 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete sequence Length = 175570 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 cacacacatatatatagtaacaat 100 |||||||||||||||| ||||||| Sbjct: 170354 cacacacatatatatattaacaat 170377
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaccacacacatatatata 92 |||||||||||||||||||| Sbjct: 44505 gaaccacacacatatatata 44524
>emb|Z70233.2|HSV870H8 Human DNA sequence from clone GHc-870H8 on chromosome X Contains the BEX1 gene for brain expressed, X-linked 1 protein and a CpG island, complete sequence Length = 36865 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cacacacatatatatagtaa 96 |||||||||||||||||||| Sbjct: 32634 cacacacatatatatagtaa 32615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,148,053 Number of Sequences: 3902068 Number of extensions: 5148053 Number of successful extensions: 198331 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 197429 Number of HSP's gapped (non-prelim): 902 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
