>OMPH2_PASMU (O54339) Major outer membrane protein precursor (MOMP) (Outer|
           membrane protein H)
          Length = 353

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 637 DGKRFSYKSKHDL-KGKDQLLHLIRRFPEGLPVVEVKDSYPTVLDDLQALKASGDV 473
           +G R S+K+ HDL +G   L +   RF + +P V+VKD    V+ + +  K   +V
Sbjct: 54  NGSRVSFKASHDLGEGLSALAYTELRFSKNVP-VQVKDQQGEVVREYEVEKLGNNV 108

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -3

Query: 413 EDQARCRLEAAVPGDRAATRHD*HREGAPEERPQASNR--HDQAACSGTDPWPATKAEGQ 240
           + + R   EAAV   RA T  D    G P   P++ +   H   A S T PWP T  E  
Sbjct: 191 DPRTRVEAEAAV---RAGTAVDFIWTGNPRTAPRSLSLGGHTVRALSPTPPWPGTDDEDD 247

Query: 239 EEAERDH 219
           + A+ D+
Sbjct: 248 DLADVDY 254

>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth|
           regulatory gene 11 protein)
          Length = 301

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
 Frame = -3

Query: 470 VAIKHGLPGRHCVPK*SQIEDQARCRL-----------EAAVPGDRAATRHD*HREGA-P 327
           VA++H  PG    P   + +   R  L           EA  P + A  + +  RE   P
Sbjct: 145 VALRHVEPGEPLAPSPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVEARRESLDP 204

Query: 326 EERPQASNRHDQAACSGTDPWPATKAEGQEEAERD--H*EDQAHKRASA*AVRPAPLAQA 153
            + P       QA   G  P P  +AEGQ EA+ D      +A  +A A    P P  +A
Sbjct: 205 VQEPGG-----QAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAEGQAEAKGDAPGPRGEA 259

Query: 152 SNDA 141
              A
Sbjct: 260 GGQA 263

>DCUP_RHILO (Q98DY6) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 343

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -1

Query: 577 HLIRRFPEGLPVVEVKDSYPTVLDDLQALKASGD---VWWLSSMDSQEDIVYPNDP 419
           +LIR+   G  VV++ DS+  VLDD     AS D   VW ++ +  Q   V+P+ P
Sbjct: 188 YLIRQIEAGADVVQIFDSWSGVLDD-----ASFDQFCVWPVAEIVRQVQAVHPDVP 238

>MASS1_MOUSE (Q8VHN7) Monogenic audiogenic seizure susceptibility protein 1|
            precursor (Very large G-protein coupled receptor 1)
            (Neurepin)
          Length = 6298

 Score = 25.8 bits (55), Expect(2) = 5.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 73   LFLCYFILGERTCCXLK 23
            +F+ YFIL  +TCC +K
Sbjct: 6141 VFVVYFILHNQTCCPMK 6157



 Score = 22.7 bits (47), Expect(2) = 5.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 140  YKVWGHFFM*ELAIIFLHAQRYXIFV 63
            +  +GHF+M  L +IF   Q   +FV
Sbjct: 6118 HMAYGHFWMLVLFVIFNSLQGLYVFV 6143

>CAAL_PSEPK (Q88HV0) Carboxylate-amine ligase PP3253 (EC 6.3.-.-)|
          Length = 368

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 559 PEGLPVVEVKDSYPTVLDDLQALKASGDVWW 467
           PE LP     + Y  +L    AL A GD+WW
Sbjct: 188 PEALPDWAAYERYRALLQRTGALAADGDLWW 218

>CHL1_ARATH (Q05085) Nitrate/chlorate transporter|
          Length = 590

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 308 WLVAVLQEL--LLDVNHVSWQLYLPVQLLQVGIELD 409
           WLVAVL  L  L+ +    W +Y   +L +VGIELD
Sbjct: 546 WLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELD 581


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,161,971
Number of Sequences: 219361
Number of extensions: 1942788
Number of successful extensions: 5693
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5691
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)