>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 95/115 (82%), Gaps = 6/115 (5%)
 Strand = Plus / Minus

                                                                        
Query: 3    acacaggtgtngnatgtgtgtaggcggtgctagaattgacatatgcatatatgctncaca 62
            |||| ||||| | || ||||||| ||||||||||||| ||||||||    ||||| ||||
Sbjct: 1445 acactggtgttgtatatgtgtagccggtgctagaatttacatatgc----atgctccaca 1390

                                                                   
Query: 63   acactatgctcgtgcatacacagatcatagagaa-gaaaatnatgctctggtcgg 116
            || ||||| |||| || ||||||||||||  ||| |||||  |||||||||||||
Sbjct: 1389 ac-ctatgttcgtacaaacacagatcataccgaaggaaaaatatgctctggtcgg 1336

>gb|U64862.2| Caenorhabditis elegans cosmid ZC8, complete sequence
          Length = 34351

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   gaattgacatatgcatatat 54
            ||||||||||||||||||||
Sbjct: 8888 gaattgacatatgcatatat 8907

>gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosome 16, complete sequence
          Length = 206219

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     attgacatatgcatatatgc 56
              ||||||||||||||||||||
Sbjct: 147082 attgacatatgcatatatgc 147063

>gb|AC099607.6| Mus musculus chromosome 5, clone RP23-361G20, complete sequence
          Length = 204179

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     attgacatatgcatatatg 55
              |||||||||||||||||||
Sbjct: 111159 attgacatatgcatatatg 111141

>gb|AC098190.5| Rattus norvegicus 2 BAC CH230-197E15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 156786

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 83    cagatcatagagaagaaaatnatgct 108
             ||||||| |||||||||||| |||||
Sbjct: 51925 cagatcagagagaagaaaataatgct 51950

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 39       tgacatatgcatatatgct 57
                |||||||||||||||||||
Sbjct: 21403105 tgacatatgcatatatgct 21403123

>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 34     agaattgacatatgcatatatgc 56
              |||||| ||||||||||||||||
Sbjct: 124176 agaatttacatatgcatatatgc 124198

>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1729_E01
          Length = 155527

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tgacatatgcatatatgct 57
             |||||||||||||||||||
Sbjct: 47161 tgacatatgcatatatgct 47179

>emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 on chromosome 3,
             complete sequence
          Length = 107411

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    ttgacatatgcatatatgc 56
             |||||||||||||||||||
Sbjct: 52265 ttgacatatgcatatatgc 52283

>emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete
             sequence
          Length = 194770

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    aattgacatatgcatatat 54
             |||||||||||||||||||
Sbjct: 57522 aattgacatatgcatatat 57540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 746,208
Number of Sequences: 3902068
Number of extensions: 746208
Number of successful extensions: 56777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56742
Number of HSP's gapped (non-prelim): 33
length of query: 116
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 95
effective length of database: 17,151,101,840
effective search space: 1629354674800
effective search space used: 1629354674800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)