ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8n08 |
|---|---|
| Clone Library Name | barley_pub |
>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC| 2.1.1.103) Length = 475 Score = 216 bits (551), Expect = 3e-56 Identities = 101/130 (77%), Positives = 116/130 (89%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLED 457 IQDKPALFR FFKWLKPGGKVLI+DYCRS TPS EFA YIKQRGYDLHDV+ YG+ML+D Sbjct: 345 IQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPEFAEYIKQRGYDLHDVQAYGQMLKD 404 Query: 456 AGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGE 277 AGF DVIAEDRTDQF++VL REL + EK KE F++DFS+EDY+DIV GWSAKL+R+++GE Sbjct: 405 AGFDDVIAEDRTDQFVQVLRRELEKVEKEKEEFISDFSEEDYNDIVGGWSAKLERTASGE 464 Query: 276 QKWGLFIATK 247 QKWGLFIA K Sbjct: 465 QKWGLFIADK 474
>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)| (PEAMT 1) (AtNMT1) Length = 491 Score = 216 bits (549), Expect = 6e-56 Identities = 100/130 (76%), Positives = 114/130 (87%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLED 457 IQDKPALFR FFKWLKPGGKVLISDYCRSP TPS EF+ YIKQRGYDLHDV+ YG+ML+D Sbjct: 361 IQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAEFSEYIKQRGYDLHDVQAYGQMLKD 420 Query: 456 AGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGE 277 AGF DVIAEDRTDQF++VL+REL EK KE F++DFS+EDYDDIV GW +KL+R ++ E Sbjct: 421 AGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSKEDYDDIVGGWKSKLERCASDE 480 Query: 276 QKWGLFIATK 247 QKWGLFIA K Sbjct: 481 QKWGLFIANK 490
>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC| 2.1.1.103) Length = 490 Score = 212 bits (539), Expect = 9e-55 Identities = 96/130 (73%), Positives = 114/130 (87%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLED 457 IQDKPALFR F+KWLKPGGKVLI+DYCRSP TPS +FA YIK+RGYDLHDV+ YG+ML D Sbjct: 360 IQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPSPDFAIYIKKRGYDLHDVQAYGQMLRD 419 Query: 456 AGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGE 277 AGF +VIAEDRTDQF++VL+REL EK KE F++DFS+EDY+DI+ GW +KL RSS+GE Sbjct: 420 AGFEEVIAEDRTDQFMKVLKRELDAVEKEKEEFISDFSKEDYEDIIGGWKSKLLRSSSGE 479 Query: 276 QKWGLFIATK 247 QKWGLFIA + Sbjct: 480 QKWGLFIAKR 489
>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)| Length = 494 Score = 207 bits (527), Expect = 2e-53 Identities = 96/130 (73%), Positives = 115/130 (88%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLED 457 IQDKPALFR+F KWLKPGGKVLISDYC+S GTPS EFAAYI+QRGYDLHDVK YGKML+D Sbjct: 364 IQDKPALFRSFHKWLKPGGKVLISDYCKSAGTPSAEFAAYIRQRGYDLHDVKAYGKMLKD 423 Query: 456 AGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGE 277 AGF +VIAE+RTDQF++VL++EL E+ K+ F+ DFS+EDY+DIV+GW AKL R++ GE Sbjct: 424 AGFVEVIAENRTDQFIQVLQKELDALEQEKDDFIDDFSEEDYNDIVDGWKAKLVRTTEGE 483 Query: 276 QKWGLFIATK 247 Q+WGLFIA K Sbjct: 484 QQWGLFIAKK 493
>UBIE_SHEON (Q8E9R7) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 251 Score = 37.0 bits (84), Expect = 0.049 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKM--- 466 + DK A R+ + LKPGGK+L+ ++ + P E + ++ YDL+ K KM Sbjct: 146 VTDKDAALRSMNRVLKPGGKLLVLEFSK----PQHE----VMRKVYDLYSFKVLPKMGQL 197 Query: 465 -LEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNG 313 +DA ++ +AE + + + A F Q DY ++ +G Sbjct: 198 ITKDADSYEYLAES--------IRMHPDQDTLKQMMVDAGFEQVDYTNMTDG 241
>UBIE_PHOLL (Q7MZ81) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 251 Score = 32.7 bits (73), Expect = 0.93 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKM-LE 460 + +K R+ F+ LKPGG++L+ ++ + P + AY Y H + G++ ++ Sbjct: 146 VTEKEKALRSMFRVLKPGGRLLVLEFSKPLFAPLSK--AY---DAYSFHVLPKIGQVFVQ 200 Query: 459 DAGFHDVIAE 430 DAG + +AE Sbjct: 201 DAGSYRYLAE 210
>TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine synthetase III)| [Includes: ATP-dependent asparagine adenylase (AsnA) (Asparagine activase); ATP-dependent glutamine adenylase (GlnA) (Glutamine activase); ATP-dependent tyrosine adenylase (TyrA) (Ty Length = 6486 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/88 (28%), Positives = 41/88 (46%) Frame = -2 Query: 594 LKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQ 415 + P G + Y S G + E A +++RGY + D+ + +D +AE D Sbjct: 6303 IDPSGPYTLMGYS-SGGNLAFEVAKELEERGYGVTDIILFDSYWKDKAIERTVAETEND- 6360 Query: 414 FLRVLERELGETEKNKEAFLADFSQEDY 331 + L E+GE N E F + +QED+ Sbjct: 6361 -IAQLFAEIGE---NTEMF--NMTQEDF 6382
>GH317_ARATH (Q9FZ87) Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-)| (Auxin-responsive GH3-like protein 17) (AtGH3-17) Length = 609 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/58 (25%), Positives = 31/58 (53%) Frame = -2 Query: 495 LHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDI 322 L D+ T + ++ H +++++ Q+LR GE +KN+++F +YDD+ Sbjct: 17 LEDLTTNAEAIQQQVLHQILSQNSGTQYLRAFLD--GEADKNQQSFKNKVPVVNYDDV 72
>OS9_YARLI (Q6C3U1) Protein OS-9 homolog precursor| Length = 558 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = -2 Query: 534 EEFAAYIKQRGYDLHDVKTYG-KMLEDAGFHDVIAEDRTDQFLRVLERELGETEK 373 EE A+ +++G D+ +++ G ML+DAG DV+A TD+ ++ L +E +++K Sbjct: 385 EEKYAWWQEQG-DMSNLEIQGLTMLDDAGIEDVLAR-ATDEVMKQLNKEAKQSKK 437
>EFG_LACLA (Q9CDG1) Elongation factor G (EF-G)| Length = 709 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 405 VLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKL 298 + E +G E N E DF+ E+Y ++ N W KL Sbjct: 194 IKETVVGSDEFNAELAALDFNAEEYTELANEWREKL 229
>MRAW_CHLAB (Q5L6B5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 298 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -2 Query: 618 LFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRG 502 L + +WL PGG+++I +C S P + F ++ G Sbjct: 224 LLESAMRWLAPGGRLIIISFCSSEDRPVKWFFREAEKSG 262
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -2 Query: 555 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 382 +S G P S + + K R D K+ G+ D D I E R + R ERE+ E Sbjct: 618 KSKGEPVISVKATSRSKDRSSKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRE 677 Query: 381 TEKNKE 364 TE+ +E Sbjct: 678 TERRRE 683
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 30.4 bits (67), Expect = 4.6 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Frame = -2 Query: 531 EFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVI--AEDRTDQFLRVLERELGETEKNKEAF 358 E +A +K ++ K LED DV+ AED V +LGE+ E F Sbjct: 864 ELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDH------VTTPDLGESHLGGEEF 917 Query: 357 LADFSQEDY------DDIVNGWSAKLKRSSAGEQK 271 L F DY DDI+ +LK+ EQK Sbjct: 918 LKQFEVTDYKADIDWDDIIP--EEELKKLQDEEQK 950
>UBIE_VIBVY (Q7MQ33) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 260 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAY 517 + DK R+ F+ LKPGG++L+ ++ + P S+ + AY Sbjct: 155 VTDKDKALRSMFRVLKPGGRLLVLEFSKPVFDPLSKVYDAY 195
>UBIE_VIBVU (Q8DDP9) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 260 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAY 517 + DK R+ F+ LKPGG++L+ ++ + P S+ + AY Sbjct: 155 VTDKDKALRSMFRVLKPGGRLLVLEFSKPVFDPLSKVYDAY 195
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -2 Query: 555 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 382 +S G P S + + K+R D K+ K D D I E R + R ERE+ E Sbjct: 576 KSKGEPVISVKTTSRSKERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRE 635 Query: 381 TEKNKE 364 TE+ +E Sbjct: 636 TERRRE 641
>UBIE_VIBPA (Q87TH4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 259 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAYI-----KQRGYDLHDVKTY 475 + DK R+ F+ LKPGG++L+ ++ + P S+ + AY K +D ++Y Sbjct: 154 VTDKDKALRSMFRVLKPGGRLLVLEFSKPVLEPLSKVYDAYSFHLLPKMGELVANDAESY 213 Query: 474 GKMLEDAGFH 445 + E H Sbjct: 214 RYLAESIRMH 223
>KSGA_METKA (Q8TWU7) Probable dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) Length = 278 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = -2 Query: 441 VIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVN 316 VIA + + + +L+RELGE N E ADF + D D VN Sbjct: 69 VIAVELDGRMVEILKRELGEA-PNLEIVRADFLEYDVPDDVN 109
>UBIE_VIBCH (Q9KVQ6) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 260 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML-E 460 + DK R+ F+ LKPGG++L+ ++ + P + Y H + G+++ Sbjct: 155 VTDKDKALRSMFRVLKPGGRLLVLEFSKPILEPLSKL-----YDTYSFHILPKMGQLIAN 209 Query: 459 DAGFHDVIAE 430 DA + +AE Sbjct: 210 DADSYRYLAE 219
>UBIE_HAEDU (P59911) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 259 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEE------FAAYIKQRGYDLHDVKTY 475 + DK ++ ++ LKPGG++L+ ++ + P + F K G ++D ++Y Sbjct: 154 VTDKDKALKSMYRVLKPGGRLLVLEFSKPIFDPISQLYNFYSFNILPKVGGIVVNDAESY 213 Query: 474 GKMLEDAGFH 445 + E H Sbjct: 214 RYLAESIRMH 223
>UBIE_SALTY (P0A2K5) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 251 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML-E 460 + +K R+ F+ LKPGG++L+ ++ + P + AY Y H + G M+ Sbjct: 146 VTEKEKALRSMFRVLKPGGRLLVLEFSKPIIEPLSK--AY---DAYSFHILPRIGSMVAN 200 Query: 459 DAGFHDVIAE 430 DA + +AE Sbjct: 201 DADSYRYLAE 210
>UBIE_SALTI (P0A2K6) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 251 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML-E 460 + +K R+ F+ LKPGG++L+ ++ + P + AY Y H + G M+ Sbjct: 146 VTEKEKALRSMFRVLKPGGRLLVLEFSKPIIEPLSK--AY---DAYSFHILPRIGSMVAN 200 Query: 459 DAGFHDVIAE 430 DA + +AE Sbjct: 201 DADSYRYLAE 210
>UBIE_IDILO (Q5QYG2) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 251 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Frame = -2 Query: 636 IQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLED 457 + DK R+ + LKPGG+VLI ++ S+ +A + Q YD + KM Sbjct: 146 VTDKDKALRSMLRVLKPGGRVLILEF-------SKPVSATLNQ-VYDFYSFNILPKM--- 194 Query: 456 AGFHDVIAEDRTD-QFLRVLERELGETEKNKEAF-LADFSQEDYDDIVNG 313 V+A D Q+L R + E K A + + DY ++ G Sbjct: 195 ---GQVVANDSDSYQYLAESIRMHPDQETLKSMMEAAGYEKVDYQNMTGG 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,385,949 Number of Sequences: 219361 Number of extensions: 1278547 Number of successful extensions: 4754 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4654 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4750 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
