ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1i01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109497.1| Zea mays CL2656_1 mRNA sequence 260 3e-66
2ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
4dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
5dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
6gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 170 2e-39
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
8dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
9dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
10gb|BT017000.1| Zea mays clone EK07D2309E12.c mRNA sequence 123 5e-25
11gb|AY105280.1| Zea mays PCO151044 mRNA sequence 123 5e-25
12dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
13gb|AY109803.1| Zea mays CL59926_1 mRNA sequence 86 1e-13
14gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
16dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
17dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
20emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 82 2e-12
21emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 82 2e-12
22gb|AY279313.1| Malus x domestica phosphate/phosphoenolpyruvate t... 66 1e-07
23dbj|AK110242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
24gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete... 44 0.36
25gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete... 44 0.36
26ref|XM_953936.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.36
27ref|XM_331392.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.36
28gb|AC185538.1| Drosophila melanogaster clone BACR04D19, complete... 44 0.36
29gb|AC068714.9| Homo sapiens chromosome 15 clone RP11-315O8 map 1... 44 0.36
30gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 44 0.36
31gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29... 44 0.36
32gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718... 44 0.36
33gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, r... 44 0.36
34gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 ... 44 0.36
35ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
36ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
37ref|XM_456297.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F27357g ... 42 1.4
38gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.4
39emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.4
40ref|NM_142521.1| Drosophila melanogaster CG6026-RA (CG6026), mRNA 42 1.4
41gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, r... 42 1.4
42gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, r... 42 1.4
43gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.4
44emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, ... 42 1.4
45gb|AY884188.1| Cochliobolus heterostrophus nonribosomal peptide ... 42 1.4
46gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62... 42 1.4
47gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, co... 40 5.6
48ref|XM_641340.1| Dictyostelium discoideum hypothetical protein (... 40 5.6
49ref|XM_637679.1| Dictyostelium discoideum hypothetical protein (... 40 5.6
50ref|XM_635835.1| Dictyostelium discoideum hypothetical protein (... 40 5.6
51ref|XM_630327.1| Dictyostelium discoideum hypothetical protein (... 40 5.6
52ref|XM_629340.1| Dictyostelium discoideum RhoGAP domain-containi... 40 5.6
53ref|NM_031737.1| Rattus norvegicus NK6 transcription factor rela... 40 5.6
54gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 5.6
55gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6,... 40 5.6
56gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, c... 40 5.6
57gb|AY515027.1| Eulimnadia texana microsatellite CS12 sequence 40 5.6
58gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 5.6
59ref|XM_417477.1| PREDICTED: Gallus gallus similar to cadherin 22... 40 5.6
60gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete... 40 5.6
61ref|NM_144955.1| Mus musculus NK6 transcription factor related, ... 40 5.6
62gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173... 40 5.6
63gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, com... 40 5.6
64ref|XM_820209.1| Trypanosoma brucei TREU927 clone RPCI93-1P6 hyp... 40 5.6
65emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in ... 40 5.6
66gb|AC121983.3| Mus musculus BAC clone RP24-292F8 from chromosome... 40 5.6
67ref|XM_646942.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 5.6
68ref|XM_725342.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 5.6
69gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete... 40 5.6
70emb|AL445674.12| Human DNA sequence from clone RP11-477L5 on chr... 40 5.6
71gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell... 40 5.6
72gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell ... 40 5.6
73ref|NM_164855.1| Drosophila melanogaster numb CG3779-RB, transcr... 40 5.6
74gb|AC105263.2| Drosophila melanogaster 3L BAC RP98-48G3 (Roswell... 40 5.6
75ref|NM_078799.2| Drosophila melanogaster numb CG3779-RA, transcr... 40 5.6
76gb|AY051728.1| Drosophila melanogaster LD25907 full length cDNA 40 5.6
77ref|NM_001029481.1| Caenorhabditis elegans F41E7.9 (F41E7.9) mRN... 40 5.6
78tpg|BK000997.1| TPA: TPA_exp: Anopheles gambiae str. PEST Kurtz ... 40 5.6
79gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, r... 40 5.6
80gb|AF357883.1|AF357883 Mus musculus homeodomain transcription fa... 40 5.6
81gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, ... 40 5.6
82gb|AF291666.1|AF291666 Mus musculus homeodomain-containing trans... 40 5.6
83gb|AE004953.1| Pseudomonas aeruginosa PAO1, section 514 of 529 o... 40 5.6
84ref|XM_579527.1| PREDICTED: Rattus norvegicus NK6 transcription ... 40 5.6
85gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
86gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell ... 40 5.6
87gb|AF004431.1|AF004431 Rattus norvegicus homeodomain protein Nkx... 40 5.6
88emb|BX901879.18| Zebrafish DNA sequence from clone CH211-226N2 i... 40 5.6
89emb|Z49207.1|CER07E3 Caenorhabditis elegans Cosmid R07E3, comple... 40 5.6
90gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21... 40 5.6
91gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34... 40 5.6
92gb|AE003543.4| Drosophila melanogaster chromosome 3L, section 42... 40 5.6
93gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 5.6
94gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 ... 40 5.6
95gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 ... 40 5.6
96gb|U62154.1|BRU62154 Bovine rotavirus outer capsid glycoprotein ... 40 5.6
97gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.6
98gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.10... 40 5.6
99gb|AC004562.1|AC004562 Homo sapiens chromosome 17, clone hRPC.34... 40 5.6
100gb|AC004637.1|AC004637 Homo sapiens chromosome 19, cosmid F16815... 40 5.6
101emb|AL954333.7| Zebrafish DNA sequence from clone CH211-287M15, ... 40 5.6
102gb|L36951.1|TFEMADE Thiobacillus versutus membrane protein (madE... 40 5.6
103gb|M27815.1|DRONUMB D.melanogaster numb mRNA, complete cds 40 5.6
104gb|U06346.1|SIU06346 Simian immunodeficiency virus Mne clone SIV... 40 5.6
105gb|U06281.1|SIU06281 Simian immunodeficiency virus Mne clone SIV... 40 5.6 
>gb|AY109497.1| Zea mays CL2656_1 mRNA sequence
          Length = 927

 Score =  260 bits (131), Expect = 3e-66
 Identities = 155/163 (95%)
 Strand = Plus / Plus

                                                                       
Query: 249 gtcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcc 308
           |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 301 gtcttgcggtcgccgtgcgagtcgcgctcctgcagcagcgacccggcctcctcgtcggcc 360

                                                                       
Query: 309 tgcgccaccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtag 368
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcgccgccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtag 420

                                                      
Query: 369 tagcccacgcccaggaaggcgatcccgtagccgaagaggttga 411
           || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 421 tatcccaccccgaggaaggcgatcccgtagccgaagaggttga 463
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>ref|NM_190949.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score =  218 bits (110), Expect = 1e-53
 Identities = 152/166 (91%)
 Strand = Plus / Minus

                                                                        
Query: 250  tcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcct 309
            ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1069 tcttgcgttcgccgtgcgagtcacgctcctgcagcagcgagccggcctcctcgtcggcct 1010

                                                                        
Query: 310  gcgccaccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtagt 369
            | ||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 1009 gtgcggccttcttctgcgcctccttcgccttgagcgcctgaagcttgacgtggttgtagt 950

                                                          
Query: 370  agcccacgcccaggaaggcgatcccgtagccgaagaggttgatcgg 415
            |||| || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 949  agcctacaccgaggaatgcgatcccgtagccgaacaggttgatcgg 904
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  218 bits (110), Expect = 1e-53
 Identities = 152/166 (91%)
 Strand = Plus / Plus

                                                                            
Query: 250      tcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcct 309
                ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 34011150 tcttgcgttcgccgtgcgagtcacgctcctgcagcagcgagccggcctcctcgtcggcct 34011209

                                                                            
Query: 310      gcgccaccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtagt 369
                | ||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 34011210 gtgcggccttcttctgcgcctccttcgccttgagcgcctgaagcttgacgtggttgtagt 34011269

                                                              
Query: 370      agcccacgcccaggaaggcgatcccgtagccgaagaggttgatcgg 415
                |||| || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 34011270 agcctacaccgaggaatgcgatcccgtagccgaacaggttgatcgg 34011315



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                            
Query: 62       tttcctgtatttatttgccttgctaccacaaattaaggcaagaaatgaacagattctgca 121
                ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 34010992 tttcctgtatttatttgccttcctaccacaaattaagacaagaaatgaacagattttgca 34011051

                   
Query: 122      tca 124
                |||
Sbjct: 34011052 tca 34011054
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>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0034E02
          Length = 165497

 Score =  218 bits (110), Expect = 1e-53
 Identities = 152/166 (91%)
 Strand = Plus / Plus

                                                                        
Query: 250  tcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcct 309
            ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 7628 tcttgcgttcgccgtgcgagtcacgctcctgcagcagcgagccggcctcctcgtcggcct 7687

                                                                        
Query: 310  gcgccaccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtagt 369
            | ||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 7688 gtgcggccttcttctgcgcctccttcgccttgagcgcctgaagcttgacgtggttgtagt 7747

                                                          
Query: 370  agcccacgcccaggaaggcgatcccgtagccgaagaggttgatcgg 415
            |||| || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 7748 agcctacaccgaggaatgcgatcccgtagccgaacaggttgatcgg 7793



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                        
Query: 62   tttcctgtatttatttgccttgctaccacaaattaaggcaagaaatgaacagattctgca 121
            ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 7470 tttcctgtatttatttgccttcctaccacaaattaagacaagaaatgaacagattttgca 7529

               
Query: 122  tca 124
            |||
Sbjct: 7530 tca 7532
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0003D09
          Length = 161970

 Score =  218 bits (110), Expect = 1e-53
 Identities = 152/166 (91%)
 Strand = Plus / Plus

                                                                          
Query: 250    tcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcct 309
              ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 142593 tcttgcgttcgccgtgcgagtcacgctcctgcagcagcgagccggcctcctcgtcggcct 142652

                                                                          
Query: 310    gcgccaccttcttctgcgcctccttggccttgagcgcctgcagcttgacgtggttgtagt 369
              | ||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 142653 gtgcggccttcttctgcgcctccttcgccttgagcgcctgaagcttgacgtggttgtagt 142712

                                                            
Query: 370    agcccacgcccaggaaggcgatcccgtagccgaagaggttgatcgg 415
              |||| || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 142713 agcctacaccgaggaatgcgatcccgtagccgaacaggttgatcgg 142758



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                          
Query: 62     tttcctgtatttatttgccttgctaccacaaattaaggcaagaaatgaacagattctgca 121
              ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 142435 tttcctgtatttatttgccttcctaccacaaattaagacaagaaatgaacagattttgca 142494

                 
Query: 122    tca 124
              |||
Sbjct: 142495 tca 142497
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
             complete sequence
          Length = 121466

 Score =  170 bits (86), Expect = 2e-39
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                         
Query: 270   tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
             ||||||||||||| ||||||||| |||||||| || |||||    | |||||||||||||
Sbjct: 29750 tcgcgctcctgcaacagcgagccagcctcctcatcagcctggctgatcttcttctgcgcc 29691

                                                                         
Query: 330   tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
             ||||| |||||||||||||||||||||||||||||||||||  |||| |||| |||||||
Sbjct: 29690 tccttcgccttgagcgcctgcagcttgacgtggttgtagtatgccacccccaagaaggcg 29631

                                       
Query: 390   atcccgtagccgaagaggttgatcgg 415
             |||||||||||||| |||||||||||
Sbjct: 29630 atcccgtagccgaacaggttgatcgg 29605
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  170 bits (86), Expect = 2e-39
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                            
Query: 270      tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
                ||||||||||||| ||||||||| |||||||| || |||||    | |||||||||||||
Sbjct: 24143511 tcgcgctcctgcaacagcgagccagcctcctcatcagcctggctgatcttcttctgcgcc 24143452

                                                                            
Query: 330      tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
                ||||| |||||||||||||||||||||||||||||||||||  |||| |||| |||||||
Sbjct: 24143451 tccttcgccttgagcgcctgcagcttgacgtggttgtagtatgccacccccaagaaggcg 24143392

                                          
Query: 390      atcccgtagccgaagaggttgatcgg 415
                |||||||||||||| |||||||||||
Sbjct: 24143391 atcccgtagccgaacaggttgatcgg 24143366
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>dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full
            insert sequence
          Length = 1576

 Score =  170 bits (86), Expect = 2e-39
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
            ||||||||||||| ||||||||| |||||||| || |||||    | |||||||||||||
Sbjct: 1128 tcgcgctcctgcaacagcgagccagcctcctcatcagcctggctgatcttcttctgcgcc 1069

                                                                        
Query: 330  tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
            ||||| |||||||||||||||||||||||||||||||||||  |||| |||| |||||||
Sbjct: 1068 tccttcgccttgagcgcctgcagcttgacgtggttgtagtatgccacccccaagaaggcg 1009

                                      
Query: 390  atcccgtagccgaagaggttgatcgg 415
            |||||||||||||| |||||||||||
Sbjct: 1008 atcccgtagccgaacaggttgatcgg 983
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>dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H01, full
            insert sequence
          Length = 1312

 Score =  170 bits (86), Expect = 2e-39
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
            ||||||||||||| ||||||||| |||||||| || |||||    | |||||||||||||
Sbjct: 1118 tcgcgctcctgcaacagcgagccagcctcctcatcagcctggctgatcttcttctgcgcc 1059

                                                                        
Query: 330  tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
            ||||| |||||||||||||||||||||||||||||||||||  |||| |||| |||||||
Sbjct: 1058 tccttcgccttgagcgcctgcagcttgacgtggttgtagtatgccacccccaagaaggcg 999

                                      
Query: 390  atcccgtagccgaagaggttgatcgg 415
            |||||||||||||| |||||||||||
Sbjct: 998  atcccgtagccgaacaggttgatcgg 973
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>gb|BT017000.1| Zea mays clone EK07D2309E12.c mRNA sequence
          Length = 778

 Score =  123 bits (62), Expect = 5e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                       
Query: 270 tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
           |||||||||||||  ||||| ||||||||||| || ||||| |   | |||||||| |||
Sbjct: 421 tcgcgctcctgcaagagcgacccggcctcctcatcagcctgtgtggctttcttctgtgcc 362

                                                                       
Query: 330 tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
           ||||| ||||||||||||||||||||||| || |||||||||||||| || |  || |||
Sbjct: 361 tccttagccttgagcgcctgcagcttgacatgattgtagtagcccacccctaaaaacgcg 302

                                     
Query: 390 atcccgtagccgaagaggttgatcgg 415
           |||||||| ||||| |||||||||||
Sbjct: 301 atcccgtacccgaacaggttgatcgg 276
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>gb|AY105280.1| Zea mays PCO151044 mRNA sequence
          Length = 1004

 Score =  123 bits (62), Expect = 5e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                       
Query: 270 tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
           |||||||||||||  ||||| ||||||||||| || ||||| |   | |||||||| |||
Sbjct: 613 tcgcgctcctgcaagagcgacccggcctcctcatcagcctgtgtggctttcttctgtgcc 554

                                                                       
Query: 330 tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaaggcg 389
           ||||| ||||||||||||||||||||||| || |||||||||||||| || |  || |||
Sbjct: 553 tccttagccttgagcgcctgcagcttgacatgattgtagtagcccacccctaaaaacgcg 494

                                     
Query: 390 atcccgtagccgaagaggttgatcgg 415
           |||||||| ||||| |||||||||||
Sbjct: 493 atcccgtacccgaacaggttgatcgg 468
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>dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A04, full
           insert sequence
          Length = 876

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 62  tttcctgtatttatttgccttgctaccacaaattaaggcaagaaatgaacagattctgca 121
           ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 792 tttcctgtatttatttgccttcctaccacaaattaagacaagaaatgaacagattttgca 733

              
Query: 122 tca 124
           |||
Sbjct: 732 tca 730



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                       
Query: 250 tcttgcgctcgccgtgagagtcgcgctcctgcagcagcgagccggcctcctcgtccgcct 309
           ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 634 tcttgcgttcgccgtgcgagtcacgctcctgcagcagcgagccggcctcctcgtcggcct 575

            
Query: 310 g 310
           |
Sbjct: 574 g 574
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>gb|AY109803.1| Zea mays CL59926_1 mRNA sequence
          Length = 592

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 270 tcgcgctcctgcagcagcgagccggcctcctcgtccgcctgcgccaccttcttctgcgcc 329
           |||||||||||||  ||||| ||  ||||||| || ||||| ||  | |||||||| |||
Sbjct: 392 tcgcgctcctgcaagagcgacccaacctcctcatcagcctgtgcggctttcttctgggcc 451

                                                          
Query: 330 tccttggccttgagcgcctgcagcttgacgtggttgtagtagcccac 376
           ||||| ||||||||||||||||||||||| || ||||||||| ||||
Sbjct: 452 tccttagccttgagcgcctgcagcttgacatgattgtagtaggccac 498
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>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0068G15, complete sequence
          Length = 146175

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                         
Query: 327   gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
             |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 30718 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 30659

                                      
Query: 387   gcgatcccgtagccgaagaggttga 411
             || || || ||||||| ||||||||
Sbjct: 30658 gcaatgccatagccgacgaggttga 30634
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 327     gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
               |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 1751958 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 1751899

                                        
Query: 387     gcgatcccgtagccgaagaggttga 411
               || || || ||||||| ||||||||
Sbjct: 1751898 gcaatgccatagccgacgaggttga 1751874
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 327     gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
               |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 1812888 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 1812829

                                        
Query: 387     gcgatcccgtagccgaagaggttga 411
               || || || ||||||| ||||||||
Sbjct: 1812828 gcaatgccatagccgacgaggttga 1812804
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>dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B12, full
            insert sequence
          Length = 1589

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
            |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 1149 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 1090

                                     
Query: 387  gcgatcccgtagccgaagaggttga 411
            || || || ||||||| ||||||||
Sbjct: 1089 gcaatgccatagccgacgaggttga 1065
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 327     gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
               |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 1810609 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 1810550

                                        
Query: 387     gcgatcccgtagccgaagaggttga 411
               || || || ||||||| ||||||||
Sbjct: 1810549 gcaatgccatagccgacgaggttga 1810525
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 327     gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
               |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 1751935 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 1751876

                                        
Query: 387     gcgatcccgtagccgaagaggttga 411
               || || || ||||||| ||||||||
Sbjct: 1751875 gcaatgccatagccgacgaggttga 1751851
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>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132026

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                         
Query: 327   gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
             |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 88525 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 88584

                                      
Query: 387   gcgatcccgtagccgaagaggttga 411
             || || || ||||||| ||||||||
Sbjct: 88585 gcaatgccatagccgacgaggttga 88609
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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104307

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                         
Query: 327   gcctccttggccttgagcgcctgcagcttgacgtggttgtagtagcccacgcccaggaag 386
             |||||| ||||||||||| ||||||||||| | |||||||||||| | ||||| ||||||
Sbjct: 14963 gcctccctggccttgagcccctgcagcttggcatggttgtagtaggcgacgccgaggaag 15022

                                      
Query: 387   gcgatcccgtagccgaagaggttga 411
             || || || ||||||| ||||||||
Sbjct: 15023 gcaatgccatagccgacgaggttga 15047
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>gb|AY279313.1| Malus x domestica phosphate/phosphoenolpyruvate translocator
           protein-like mRNA, partial sequence
          Length = 518

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                       
Query: 296 ctcctcgtccgcctgcgccaccttcttctgcgcctccttggccttgagcgcctgcagctt 355
           ||||||||| | ||||||  ||||||||||||| ||||||||||| || |||||||  ||
Sbjct: 320 ctcctcgtcgggctgcgcggccttcttctgcgcatccttggccttcagagcctgcaattt 261

                                                                       
Query: 356 gacgtggttgtagtagcccacgcccaggaaggcgatcccgtagccgaagaggttgatcgg 415
              ||||||||||||| | || ||||  || ||||  ||||||||||| || ||||||||
Sbjct: 260 agagtggttgtagtaggcaacccccaaaaacgcgaggccgtagccgaacagattgatcgg 201

            
Query: 416 g 416
           |
Sbjct: 200 g 200
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>dbj|AK110242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-G05, full
           insert sequence
          Length = 2733

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 312 gccaccttcttctgcgcctccttggcctt 340
           |||||||| ||||||||||||||||||||
Sbjct: 452 gccaccttgttctgcgcctccttggcctt 424
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>gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete sequence
          Length = 165876

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 194   ctgttggtgttgttgttggatc 215
             ||||||||||||||||||||||
Sbjct: 81436 ctgttggtgttgttgttggatc 81457
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>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence
          Length = 182105

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 56    tgcatatttcctgtatttattt 77
             ||||||||||||||||||||||
Sbjct: 35191 tgcatatttcctgtatttattt 35170
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>ref|XM_953936.1| Neurospora crassa OR74A hypothetical protein (NCU09001.1) partial
            mRNA
          Length = 1719

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 192  tgctgttggtgttgttgttgga 213
            ||||||||||||||||||||||
Sbjct: 1702 tgctgttggtgttgttgttgga 1681
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>ref|XM_331392.1| Neurospora crassa OR74A hypothetical protein (NCU09001.1) partial
            mRNA
          Length = 1719

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 192  tgctgttggtgttgttgttgga 213
            ||||||||||||||||||||||
Sbjct: 1702 tgctgttggtgttgttgttgga 1681
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>gb|AC185538.1| Drosophila melanogaster clone BACR04D19, complete sequence
          Length = 159597

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 194   ctgttggtgttgttgttggatc 215
             ||||||||||||||||||||||
Sbjct: 33878 ctgttggtgttgttgttggatc 33899
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>gb|AC068714.9| Homo sapiens chromosome 15 clone RP11-315O8 map 15q15, complete
           sequence
          Length = 200690

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 86  accacaaattaaggcaagaaat 107
           ||||||||||||||||||||||
Sbjct: 878 accacaaattaaggcaagaaat 857
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 322    tctgcgcctccttggccttgag 343
              ||||||||||||||||||||||
Sbjct: 476490 tctgcgcctccttggccttgag 476511
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>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete
              sequence
          Length = 294168

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 56     tgcatatttcctgtatttattt 77
              ||||||||||||||||||||||
Sbjct: 250274 tgcatatttcctgtatttattt 250253
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>gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718O11 map 15q21.1, complete
              sequence
          Length = 180538

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     accacaaattaaggcaagaaat 107
              ||||||||||||||||||||||
Sbjct: 175021 accacaaattaaggcaagaaat 175000
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>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones
             DS04499, DS06146, and DS00455, complete sequence
          Length = 145055

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 56    tgcatatttcctgtatttattt 77
             ||||||||||||||||||||||
Sbjct: 71954 tgcatatttcctgtatttattt 71933
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>gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 of 73 of the complete
             sequence
          Length = 415717

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 194   ctgttggtgttgttgttggatc 215
             ||||||||||||||||||||||
Sbjct: 51104 ctgttggtgttgttgttggatc 51125
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>ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 191  gtgctgttggtgttgttgttg 211
            |||||||||||||||||||||
Sbjct: 1428 gtgctgttggtgttgttgttg 1408
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>ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 191  gtgctgttggtgttgttgttg 211
            |||||||||||||||||||||
Sbjct: 1428 gtgctgttggtgttgttgttg 1408
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>ref|XM_456297.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F27357g predicted mRNA
          Length = 2613

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 192 tgctgttggtgttgttgttgg 212
           |||||||||||||||||||||
Sbjct: 881 tgctgttggtgttgttgttgg 861
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 325    gcgcctccttggccttgagcgcctgcagcttga 357
              |||| |||||||||||||||| |||| ||||||
Sbjct: 348203 gcgcttccttggccttgagcgtctgctgcttga 348171
to top
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 192     tgctgttggtgttgttgttgg 212
               |||||||||||||||||||||
Sbjct: 2531828 tgctgttggtgttgttgttgg 2531808
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>ref|NM_142521.1| Drosophila melanogaster CG6026-RA (CG6026), mRNA
          Length = 4629

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 192  tgctgttggtgttgttgttgg 212
            |||||||||||||||||||||
Sbjct: 1373 tgctgttggtgttgttgttgg 1353
to top
>gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, region 91E-91E, BAC clone
              BACR07D13, complete sequence
          Length = 153048

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    tgctgttggtgttgttgttgg 212
              |||||||||||||||||||||
Sbjct: 122365 tgctgttggtgttgttgttgg 122345
to top
>gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone
              BACR44N12, complete sequence
          Length = 204173

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    tgctgttggtgttgttgttgg 212
              |||||||||||||||||||||
Sbjct: 199773 tgctgttggtgttgttgttgg 199753
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>gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OABb-121A1, complete
             sequence
          Length = 142600

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 49    acaaaattgcatatttcctgtatttattt 77
             |||||||||||||||||  ||||||||||
Sbjct: 10542 acaaaattgcatatttcaggtatttattt 10514
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>emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, complete sequence
          Length = 159670

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   tgctgttggtgttgttgttgg 212
             |||||||||||||||||||||
Sbjct: 85918 tgctgttggtgttgttgttgg 85938
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>gb|AY884188.1| Cochliobolus heterostrophus nonribosomal peptide synthetase 3 (NPS3)
             gene, complete cds
          Length = 17477

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   gaaatgaacagattctgcatc 123
             |||||||||||||||||||||
Sbjct: 15300 gaaatgaacagattctgcatc 15280
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>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete
              sequence
          Length = 232330

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    tgctgttggtgttgttgttgg 212
              |||||||||||||||||||||
Sbjct: 178866 tgctgttggtgttgttgttgg 178846
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>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence
          Length = 188130

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 295    cctcctcgtccgcctgcgccacct 318
              ||||||||||||||| ||||||||
Sbjct: 169585 cctcctcgtccgcctccgccacct 169562
to top
>ref|XM_641340.1| Dictyostelium discoideum hypothetical protein (DDB0190700), partial
           mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 680 tgctgttggtgttgttgttg 661
to top
>ref|XM_637679.1| Dictyostelium discoideum hypothetical protein (DDB0169151), partial
            mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  tgctgttggtgttgttgttg 211
            ||||||||||||||||||||
Sbjct: 1256 tgctgttggtgttgttgttg 1237
to top
>ref|XM_635835.1| Dictyostelium discoideum hypothetical protein (DDB0204126), partial
           mRNA
          Length = 8193

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 557 tgctgttggtgttgttgttg 538
to top
>ref|XM_630327.1| Dictyostelium discoideum hypothetical protein (DDB0189178), partial
            mRNA
          Length = 5334

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgttggtgttgttgttggat 214
            ||||||||||||||||||||
Sbjct: 3363 tgttggtgttgttgttggat 3344
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>ref|XM_629340.1| Dictyostelium discoideum RhoGAP domain-containing protein
           (DDB0229972), partial mRNA
          Length = 3561

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 147 tgctgttggtgttgttgttg 128
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>ref|NM_031737.1| Rattus norvegicus NK6 transcription factor related, locus 1
            (Drosophila) (Nkx6-1), mRNA
          Length = 3211

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  cctcctcgtccgcctgcgccacct 318
            ||||||||||||||| ||||||||
Sbjct: 1168 cctcctcgtccgcctccgccacct 1191
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 616555 tgctgttggtgttgttgttg 616536
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>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence
          Length = 152664

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 60717 tgctgttggtgttgttgttg 60736
to top
>gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, complete sequence
          Length = 166214

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 84495 tgctgttggtgttgttgttg 84514
to top
>gb|AY515027.1| Eulimnadia texana microsatellite CS12 sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 tgggcgtgctgttggtgttgttgt 209
           |||||||||||||| |||||||||
Sbjct: 66  tgggcgtgctgttgttgttgttgt 89
to top
>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 121192 tgctgttggtgttgttgttg 121211
to top
>ref|XM_417477.1| PREDICTED: Gallus gallus similar to cadherin 22 precursor; ortholog
            of rat PB-cadherin (LOC419305), mRNA
          Length = 5340

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  tcctcgtccgcctgcgccaccttc 320
            ||||||||||||||| ||||||||
Sbjct: 5135 tcctcgtccgcctgctccaccttc 5112
to top
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence
          Length = 164461

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   cggcctcctcgtccgcctgc 311
             ||||||||||||||||||||
Sbjct: 93575 cggcctcctcgtccgcctgc 93594
to top
>ref|NM_144955.1| Mus musculus NK6 transcription factor related, locus 1 (Drosophila)
           (Nkx6-1), mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 295 cctcctcgtccgcctgcgccacct 318
           ||||||||||||||| ||||||||
Sbjct: 857 cctcctcgtccgcctccgccacct 880
to top
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4,
              complete sequence
          Length = 302156

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 235914 tgctgttggtgttgttgttg 235895
to top
>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence
          Length = 199655

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    acacaaaattgcatatttcctgta 70
             |||||||||||||||||| |||||
Sbjct: 62076 acacaaaattgcatattttctgta 62099
to top
>ref|XM_820209.1| Trypanosoma brucei TREU927 clone RPCI93-1P6 hypothetical protein
           (Tb927.5.1990) partial mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 755 tgctgttggtgttgttgttg 736
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>emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in linkage group 7,
             complete sequence
          Length = 217684

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   tgttggatcagatcagatgg 226
             ||||||||||||||||||||
Sbjct: 62362 tgttggatcagatcagatgg 62381
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>gb|AC121983.3| Mus musculus BAC clone RP24-292F8 from chromosome 5, complete sequence
          Length = 161350

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   cctcctcgtccgcctgcgccacct 318
             ||||||||||||||| ||||||||
Sbjct: 36184 cctcctcgtccgcctccgccacct 36161
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>ref|XM_646942.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (135.t00020)
           partial mRNA
          Length = 2070

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 tgttggtgttgttgttggat 214
           ||||||||||||||||||||
Sbjct: 291 tgttggtgttgttgttggat 310
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>ref|XM_725342.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00031)
           partial mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  catatttcctgtatttattt 77
           ||||||||||||||||||||
Sbjct: 745 catatttcctgtatttattt 726
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>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ccttggccttgagcgcctgc 350
              ||||||||||||||||||||
Sbjct: 140763 ccttggccttgagcgcctgc 140744
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>emb|AL445674.12| Human DNA sequence from clone RP11-477L5 on chromosome 9, complete
             sequence
          Length = 91940

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tctgcgcctccttggccttg 341
             ||||||||||||||||||||
Sbjct: 63881 tctgcgcctccttggccttg 63862
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>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163090

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 76602 tgctgttggtgttgttgttg 76583
to top
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156096

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 109369 tgctgttggtgttgttgttg 109350
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>ref|NM_164855.1| Drosophila melanogaster numb CG3779-RB, transcript variant B
           (numb), mRNA
          Length = 3082

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 cggcctcctcgtccgcctgc 311
           ||||||||||||||||||||
Sbjct: 622 cggcctcctcgtccgcctgc 603
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>gb|AC105263.2| Drosophila melanogaster 3L BAC RP98-48G3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 153440

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 54787 tgctgttggtgttgttgttg 54806
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>ref|NM_078799.2| Drosophila melanogaster numb CG3779-RA, transcript variant A (numb),
            mRNA
          Length = 3479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  cggcctcctcgtccgcctgc 311
            ||||||||||||||||||||
Sbjct: 1019 cggcctcctcgtccgcctgc 1000
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>gb|AY051728.1| Drosophila melanogaster LD25907 full length cDNA
          Length = 2354

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 cggcctcctcgtccgcctgc 311
           ||||||||||||||||||||
Sbjct: 42  cggcctcctcgtccgcctgc 23
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>ref|NM_001029481.1| Caenorhabditis elegans F41E7.9 (F41E7.9) mRNA, complete cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  tgctgttggtgttgttgttg 211
            ||||||||||||||||||||
Sbjct: 1169 tgctgttggtgttgttgttg 1150
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>tpg|BK000997.1| TPA: TPA_exp: Anopheles gambiae str. PEST Kurtz arrestin-like protein
             ArrK (ARRK) gene, partial cds
          Length = 20620

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catatttcctgtatttattt 77
             ||||||||||||||||||||
Sbjct: 17311 catatttcctgtatttattt 17330
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>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone
              BACR19J06, complete sequence
          Length = 175053

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 124209 tgctgttggtgttgttgttg 124190
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>gb|AF357883.1|AF357883 Mus musculus homeodomain transcription factor (Nkx6-1) mRNA,
           complete cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 295 cctcctcgtccgcctgcgccacct 318
           ||||||||||||||| ||||||||
Sbjct: 857 cctcctcgtccgcctccgccacct 880
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>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone
             BACR07D23, complete sequence
          Length = 176610

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   cggcctcctcgtccgcctgc 311
             ||||||||||||||||||||
Sbjct: 83042 cggcctcctcgtccgcctgc 83023
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>gb|AF291666.1|AF291666 Mus musculus homeodomain-containing transcription factor Nkx6.1 gene,
            partial cds
          Length = 4738

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  cctcctcgtccgcctgcgccacct 318
            ||||||||||||||| ||||||||
Sbjct: 4336 cctcctcgtccgcctccgccacct 4359
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>gb|AE004953.1| Pseudomonas aeruginosa PAO1, section 514 of 529 of the complete
            genome
          Length = 10959

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  ggccttgagcgcctgcagct 354
            ||||||||||||||||||||
Sbjct: 7685 ggccttgagcgcctgcagct 7704
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>ref|XM_579527.1| PREDICTED: Rattus norvegicus NK6 transcription factor related, locus
            1 (Drosophila) (Nkx6-1), mRNA
          Length = 3221

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  cctcctcgtccgcctgcgccacct 318
            ||||||||||||||| ||||||||
Sbjct: 1177 cctcctcgtccgcctccgccacct 1200
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    cctcgtccgcctgcgccacc 317
              ||||||||||||||||||||
Sbjct: 151554 cctcgtccgcctgcgccacc 151535
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>gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181974

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 77304 tgctgttggtgttgttgttg 77285
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>gb|AF004431.1|AF004431 Rattus norvegicus homeodomain protein Nkx6.1 (nkx6.1) mRNA, complete
            cds
          Length = 3211

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  cctcctcgtccgcctgcgccacct 318
            ||||||||||||||| ||||||||
Sbjct: 1168 cctcctcgtccgcctccgccacct 1191
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>emb|BX901879.18| Zebrafish DNA sequence from clone CH211-226N2 in linkage group 7,
             complete sequence
          Length = 152392

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tgttggatcagatcagatgg 226
             ||||||||||||||||||||
Sbjct: 65545 tgttggatcagatcagatgg 65526
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>emb|Z49207.1|CER07E3 Caenorhabditis elegans Cosmid R07E3, complete sequence
          Length = 39736

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 607 tgctgttggtgttgttgttg 626
to top
>gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21 of 118 of the
             complete sequence
          Length = 243348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 26153 tgctgttggtgttgttgttg 26134
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>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete
             sequence
          Length = 271507

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   cggcctcctcgtccgcctgc 311
             ||||||||||||||||||||
Sbjct: 23237 cggcctcctcgtccgcctgc 23218
to top
>gb|AE003543.4| Drosophila melanogaster chromosome 3L, section 42 of 83 of the complete
             sequence
          Length = 276132

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 40833 tgctgttggtgttgttgttg 40852
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 194549 tgctgttggtgttgttgttg 194530
to top
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete
             sequence
          Length = 334222

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgctgttggtgttgttgttg 211
             ||||||||||||||||||||
Sbjct: 77019 tgctgttggtgttgttgttg 77038
to top
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete
              sequence
          Length = 303602

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tgctgttggtgttgttgttg 211
              ||||||||||||||||||||
Sbjct: 135048 tgctgttggtgttgttgttg 135067
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>gb|U62154.1|BRU62154 Bovine rotavirus outer capsid glycoprotein (VP7) mRNA, complete cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 tggtgttgttgttggatcag 217
           ||||||||||||||||||||
Sbjct: 885 tggtgttgttgttggatcag 866
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     cttggccttgagcgcctgca 351
               ||||||||||||||||||||
Sbjct: 2012089 cttggccttgagcgcctgca 2012108
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>gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.1064_E_11, complete sequence
          Length = 123211

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    aattgcatatttcctgtatttatt 76
             ||||||||||||||||| ||||||
Sbjct: 14547 aattgcatatttcctgtttttatt 14524
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>gb|AC004562.1|AC004562 Homo sapiens chromosome 17, clone hRPC.34_M_24, complete sequence
          Length = 133925

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     aattgcatatttcctgtatttatt 76
              ||||||||||||||||| ||||||
Sbjct: 124941 aattgcatatttcctgtttttatt 124918
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>gb|AC004637.1|AC004637 Homo sapiens chromosome 19, cosmid F16815, complete sequence
          Length = 41459

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  gcgcctccttggccttgagc 344
            ||||||||||||||||||||
Sbjct: 1872 gcgcctccttggccttgagc 1853
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>emb|AL954333.7| Zebrafish DNA sequence from clone CH211-287M15, complete sequence
          Length = 160851

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tgttggtgttgttgttggat 214
             ||||||||||||||||||||
Sbjct: 10411 tgttggtgttgttgttggat 10430
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>gb|L36951.1|TFEMADE Thiobacillus versutus membrane protein (madE) and (madD) mRNA,
           complete cds
          Length = 1171

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 374 cacgcccaggaaggcgatcc 393
           ||||||||||||||||||||
Sbjct: 616 cacgcccaggaaggcgatcc 597
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>gb|M27815.1|DRONUMB D.melanogaster numb mRNA, complete cds
          Length = 3476

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  cggcctcctcgtccgcctgc 311
            ||||||||||||||||||||
Sbjct: 1017 cggcctcctcgtccgcctgc 998
to top
>gb|U06346.1|SIU06346 Simian immunodeficiency virus Mne clone
           SIVMne-ENV(V1)-M90076-wk38-(LN3-3) envelope glycoprotein
           (env) gene, partial sequence
          Length = 159

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 78  tgctgttggtgttgttgttg 59
to top
>gb|U06281.1|SIU06281 Simian immunodeficiency virus Mne clone
           SIVMne-ENV(V1)-M89152-wk43-(PBMC2-2) envelope
           glycoprotein (env) gene, partial cds
          Length = 159

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 tgctgttggtgttgttgttg 211
           ||||||||||||||||||||
Sbjct: 78  tgctgttggtgttgttgttg 59


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,525,063
Number of Sequences: 3902068
Number of extensions: 4525063
Number of successful extensions: 118891
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118159
Number of HSP's gapped (non-prelim): 725
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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