>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = -1

Query: 601 DKKCKGESRFPAQVRIRIRRLCKALEEDAFRPVLHHYDGPKFRLELSIAETLSLLDLCKS 422
           DKK +GESRFPAQVR+  R++C+ LEED+FRP+LHHYDGPKFRLEL+I E +SLLD+ + 
Sbjct: 145 DKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204

Query: 421 EDA 413
             A
Sbjct: 205 TKA 207

>ALDO1_ARATH (Q7G193) Aldehyde oxidase 1 (EC 1.2.3.1) (AtAO-1) (AtAO1)|
          Length = 1368

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
 Frame = -1

Query: 535 KALEEDAFRPV-------LHHYDGPKFRLELS-IAETLSLLDLCKSEDA*SA-----SEH 395
           KA++ED    +       +   +G +F LELS I  + +L+D  +++    +      E 
Sbjct: 4   KAIDEDKVEAMKSSKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEG 63

Query: 394 GCGCSVVLFSKYHP 353
           GCG  VVL SKY P
Sbjct: 64  GCGACVVLLSKYDP 77

>IRG1_MOUSE (P54987) Immune-responsive protein 1 (Fragment)|
          Length = 646

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 223 HLRGLLLPSTRSFLGEMQPPTNSLRFHGRRTEQNIVKTSSTTYR 354
           H  G LL    + L +++ P      +G+R   N++KTS TT++
Sbjct: 589 HCFGFLLHLPSNELSKVESPETETSVYGKRLVYNLIKTSPTTFK 632

>ALDO2_ARATH (Q7G192) Aldehyde oxidase 2 (EC 1.2.3.1) (AtAO-2) (AtAO3)|
          Length = 1321

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -1

Query: 490 DGPKFRLELSIAE-TLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 353
           +G +F LELS  + + +LL+  + + +      S  E GCG  VVL SK+ P
Sbjct: 8   NGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDP 59

>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)|
          Length = 1337

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = -1

Query: 490 DGPKFRLELSIAETLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 353
           +G KF + LS+  + +LL+  +S         S  E GCG  +V+ SKY P
Sbjct: 11  NGEKFEV-LSVNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDP 60

>APBB3_HUMAN (O95704) Amyloid beta A4 precursor protein-binding family B member|
           3 (Fe65-like protein 2) (Fe65L2)
          Length = 486

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +1

Query: 55  PPSLWGIHDASQQYPPHLSGGFPRWRRAYCTTNT*IRRTYRSPRLRTNGTNTETGSHLRG 234
           PP    IHDA+  Y  H+  G  +W+R           T+        GT TE    + G
Sbjct: 32  PPGWRKIHDAAGTYYWHVPSGSTQWQRP----------TWELGDAEDPGTGTE---GIWG 78

Query: 235 LLLPSTRSF--LGEMQPPTNSLRFHG 306
           L  P  RSF  L      +NSL ++G
Sbjct: 79  LRPPKGRSFSSLESSLDRSNSLSWYG 104

>DPOE1_MOUSE (Q9WVF7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2283

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 24   TDTLQHDDTKTALTLGHS*C---ITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITD 194
            T+++   +   +LT+  S C   +  + P ++GG+       +H   + +++ Q  E TD
Sbjct: 1890 TNSIHSKEIFHSLTISFSRCWEFLLWMDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETD 1949

Query: 195  ERHQHRDR 218
            E  + +++
Sbjct: 1950 EEEEDKEK 1957

>AROC_SYNEL (Q8DLM1) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 363

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +3

Query: 63  TLGHS*CITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITDERHQHRDRLTS*RPTS 242
           T GH   +TT      GGV  +  G      +++ +IQ  +  D R   + RLT+ R  S
Sbjct: 4   TFGHLFRVTTFGESHGGGVGVVVDGCPPRLELSEVDIQ--KELDRRRPGQSRLTTPRQES 61

Query: 243 SKYQVLSG 266
            + ++LSG
Sbjct: 62  DRCEILSG 69

>AROC_ANASP (Q8YYP9) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 362

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 63  TLGHS*CITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITDERHQHRDRLTS*RPTS 242
           T GH   ITT      GGV  +  G      I+ E IQ+    D R   + ++T+ R  +
Sbjct: 4   TFGHLFRITTFGESHGGGVGVVIDGCPPLLEISPEEIQLE--LDRRRPGQSKITTPRKEA 61

Query: 243 SKYQVLSG 266
              ++LSG
Sbjct: 62  DTCEILSG 69

>MURD_SYNY3 (P73668) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 452

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
 Frame = +1

Query: 202 TNTETGSHLRGLLLPSTRSFL--------GEMQPPTNSLRFHGRRTEQNIVKTSSTTYRD 357
           T+T+  +HL GL  P    +L        GE+  P N  +  G+  +QN++   +     
Sbjct: 234 TSTQGANHLAGLCDPKQGVYLQDNWVNAFGELIAPINLFKMPGQHNQQNLLMAIAAARLA 293

Query: 358 DIY*K---EPQSNHTHVPKQIRRLLTCKGL 438
            I  K   E     T VP ++  + T  G+
Sbjct: 294 GIDKKAITETLLTFTGVPHRLEPICTINGV 323


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,658,681
Number of Sequences: 219361
Number of extensions: 2276142
Number of successful extensions: 5378
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5372
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)