ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YHE1_YEAST (P38730) Hypothetical 17.6 kDa protein in CBP2 5'region 30 1.9
2ADAS_DICDI (O96759) Alkyldihydroxyacetonephosphate synthase (EC ... 27 9.2

>YHE1_YEAST (P38730) Hypothetical 17.6 kDa protein in CBP2 5'region|
          Length = 149

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 142 NVSSKTPXMXVLYHLPLSSKECNWLSVSFIRQQFVQHLE 258
           +V  K P   +L+H PL SK  N L +SF+ Q+ +   E
Sbjct: 83  SVLEKLPQNILLFHYPLPSKMGNNLLMSFLTQRSIDEKE 121



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>ADAS_DICDI (O96759) Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26)|
           (Alkyl-DHAP synthase) (Alkylglycerone-phosphate
           synthase)
          Length = 611

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/80 (20%), Positives = 33/80 (41%)
 Frame = +1

Query: 112 NQGXPKGXSRNVSSKTPXMXVLYHLPLSSKECNWLSVSFIRQQFVQHLEGSTMMS*MVPA 291
           +QG P     ++S        LY +  S +  N        +   Q++E   +M+ ++  
Sbjct: 486 DQGIPAWICAHISHTYTNGVCLYFIFASKQNEN--------KDMAQYIEAKKLMTDIIFK 537

Query: 292 VTRKIRHHYDCEYDHCGWLS 351
               + HH+   Y+H  W++
Sbjct: 538 YGGSLSHHHGVGYEHVPWMT 557


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,149,629
Number of Sequences: 219361
Number of extensions: 757955
Number of successful extensions: 1377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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