| Clone Name | rbasd1d06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | M3K10_HUMAN (Q02779) Mitogen-activated protein kinase kinase kin... | 29 | 5.5 | 2 | OXAA_CORGL (Q8NLK2) Membrane protein oxaA | 28 | 9.4 |
|---|
>M3K10_HUMAN (Q02779) Mitogen-activated protein kinase kinase kinase 10 (EC| 2.7.11.25) (Mixed lineage kinase 2) (Protein kinase MST) Length = 954 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -2 Query: 286 PGSGRGMRATSL*VEAASACCSMKHRRVSLSEEARNCLPSPTARPP 149 PG G AT + + + S C S + S S+EA PSP PP Sbjct: 736 PGLGLAPSATLVSLSSVSDCNSTRSLLRSDSDEAAPAAPSPPPSPP 781
>OXAA_CORGL (Q8NLK2) Membrane protein oxaA| Length = 422 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = +3 Query: 87 ILPIYSTAASFVVLRIAMSNHGGLAVGDGKQFLASSESETLLCFILQQALAASTYKLVAL 266 +LP++ TAA + +AMS + D AS S +L F++ ++ A + L Sbjct: 187 VLPLFITAAILTAINMAMSMYRSFQTND----YASGFSNGMLKFMIVMSILAPIFPLSLG 242 Query: 267 MPRPDP 284 + P P Sbjct: 243 LTGPFP 248 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,447,148 Number of Sequences: 219361 Number of extensions: 944259 Number of successful extensions: 2580 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2579 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)