ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8m19 |
|---|---|
| Clone Library Name | barley_pub |
>RNZ1_MOUSE (Q8VEB6) Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11)| (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) Length = 362 Score = 32.0 bits (71), Expect = 0.98 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 247 PTSKATCIILLCQVECHDFDCSNGART 327 PT A+ ++L C+ EC FDC G +T Sbjct: 17 PTRGASAVVLRCEGECWLFDCGEGTQT 43
>RNZ1_HUMAN (Q9H777) Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11)| (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29) Length = 363 Score = 32.0 bits (71), Expect = 0.98 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 247 PTSKATCIILLCQVECHDFDCSNGART 327 PT A+ ++L C+ EC FDC G +T Sbjct: 17 PTRGASAVVLRCEGECWLFDCGEGTQT 43
>HSPB8_MOUSE (Q9JK92) Heat-shock protein beta-8 (HspB8) (Alpha crystallin C| chain) (Small stress protein-like protein HSP22) Length = 196 Score = 30.8 bits (68), Expect = 2.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + Sbjct: 108 EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPATVFASLSPEGLLII 166 Query: 323 RAP 315 AP Sbjct: 167 EAP 169
>HSPB8_RAT (Q9EPX0) Heat-shock protein beta-8 (HspB8) (Alpha crystallin C| chain) (Small stress protein-like protein HSP22) Length = 196 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + Sbjct: 108 EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLII 166 Query: 323 RAP 315 AP Sbjct: 167 EAP 169
>HSPB8_PONPY (Q5RAB0) Heat-shock protein beta-8 (HspB8)| Length = 196 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + Sbjct: 108 EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLII 166 Query: 323 RAP 315 AP Sbjct: 167 EAP 169
>HSPB8_HUMAN (Q9UJY1) Heat-shock protein beta-8 (HspB8) (Alpha crystallin C| chain) (Small stress protein-like protein HSP22) (E2-induced gene 1 protein) (Protein kinase H11) Length = 196 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + Sbjct: 108 EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLII 166 Query: 323 RAP 315 AP Sbjct: 167 EAP 169
>HSPB8_BOVIN (Q5EAC9) Heat-shock protein beta-8 (HspB8)| Length = 196 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + Sbjct: 108 EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLII 166 Query: 323 RAP 315 AP Sbjct: 167 EAP 169
>HSPB8_MACMU (Q6SJQ8) Heat-shock protein beta-8 (HspB8) (Protein kinase H11)| Length = 195 Score = 30.0 bits (66), Expect = 3.7 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -1 Query: 467 GRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFVRAP 315 G + V+G+ E+ G+ F K I LP+ +DP A ++ G L + AP Sbjct: 116 GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAP 168
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 229 CKPSYDPTSKATCIILLCQ-VECHDFDCSNGARTNNCP 339 CKP P SK ++ Q + CH C NG+R N P Sbjct: 914 CKPGTVPPSKELRKVMRIQALRCHAVYCQNGSRINVIP 951
>HSPB1_PIG (Q5S1U1) Heat-shock protein beta-1 (HspB1) (Heat shock 27 kDa| protein) (HSP 27) Length = 207 Score = 29.3 bits (64), Expect = 6.4 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -1 Query: 497 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFV 324 EE+ V++ G + +TG+ E+ + G F + +LP +DP Q S+ ++ G L V Sbjct: 109 EELTVKTKD-GVVEITGKHEERQDEHGFISRCFTRKYTLPPGVDPTQVSSSLSPEGTLSV 167 Query: 323 RAP 315 AP Sbjct: 168 EAP 170
>HSPB1_HUMAN (P04792) Heat-shock protein beta-1 (HspB1) (Heat shock 27 kDa| protein) (HSP 27) (Stress-responsive protein 27) (SRP27) (Estrogen-regulated 24 kDa protein) (28 kDa heat shock protein) Length = 205 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = -1 Query: 467 GRLIVTGEPEQLDNPWGVTP--FKKVISLPSRIDPHQTSAVVTLHGQLFVRAP 315 G + +TG+ E+ + G F + +LP +DP Q S+ ++ G L V AP Sbjct: 116 GVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 168
>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)| Length = 873 Score = 28.9 bits (63), Expect = 8.3 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%) Frame = -1 Query: 443 PEQLDNPWG---VTPFKKVISLPSRIDPHQTSAVVTLHGQLFVRAPFEQSKS*HST*QSR 273 P + +P G V P + SR+ PH TS HG + P S ST + Sbjct: 691 PHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTATTV 750 Query: 272 IIHVALLVGSYDGLQVAHPDLCSTSSLLLQGSS 174 + + S L+ + PD+C + L G++ Sbjct: 751 AVSSSQSSSSSASLECSGPDVCMSPQNLSIGNA 783 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,308,288 Number of Sequences: 219361 Number of extensions: 1417296 Number of successful extensions: 3304 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3302 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
