ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0h07 |
|---|---|
| Clone Library Name | barley_pub |
>DNAJ2_PROAC (Q6A662) Chaperone protein dnaJ 2| Length = 380 Score = 34.3 bits (77), Expect = 0.076 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 4/37 (10%) Frame = -1 Query: 303 LNRKRAKDIYEFTE-CPNCYGRGKLV---CPICLGTG 205 ++ A ++E TE CP+C+GRG +V C +C G+G Sbjct: 189 MHASSAGGVFEMTEPCPDCHGRGMIVEDPCQVCHGSG 225
>DNAJ_METAC (Q8TQR1) Chaperone protein dnaJ| Length = 382 Score = 33.1 bits (74), Expect = 0.17 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGVPNNK 190 T C C+GRG+++ CP+C G G NK Sbjct: 185 TTCSTCHGRGQIIESPCPVCGGAGRVRNK 213
>DNAJ_PROMM (Q7V9C8) Chaperone protein dnaJ| Length = 378 Score = 32.3 bits (72), Expect = 0.29 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = -1 Query: 273 EFTECPNCYGRGKLV---CPICLGTGVPNNKGLLR 178 + ECP+C G G+++ CP C G GV + LR Sbjct: 185 QVAECPSCEGTGQVIADPCPACAGQGVRQVRKKLR 219
>DNAJ_PICTO (Q6L0S6) Chaperone protein dnaJ| Length = 357 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%) Frame = -1 Query: 267 TECPNCYGRGKL---VCPICLGTG 205 TEC C+GRGK+ C +C GTG Sbjct: 185 TECRTCHGRGKIPQKPCTVCHGTG 208
>DNAJ_MYXXA (Q8KRC9) Chaperone protein dnaJ| Length = 391 Score = 31.2 bits (69), Expect = 0.64 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Frame = -1 Query: 261 CPNCYGRGKLV--CPICLGTGV 202 CPNC+G GK CP C G GV Sbjct: 217 CPNCHGTGKAAPPCPQCGGAGV 238
>DNAJ_RHOBA (Q7UM96) Chaperone protein dnaJ| Length = 391 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGVPNNK 190 T CP C G GK + C C GTG N K Sbjct: 187 TTCPTCKGAGKQIGEPCGKCRGTGTQNEK 215
>DNAJ_METTE (Q9UXR9) Chaperone protein dnaJ| Length = 387 Score = 30.8 bits (68), Expect = 0.84 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGVPNN 193 T C C G+G+++ CP+C GTG N Sbjct: 184 TTCSTCRGKGQVIESPCPVCSGTGRVRN 211
>DNAJ_METSS (Q9ZFC5) Chaperone protein dnaJ| Length = 371 Score = 30.8 bits (68), Expect = 0.84 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G GK+V CP C G G Sbjct: 184 CPKCHGSGKMVKEPCPSCQGAG 205
>DNAJ_THET2 (Q72GN6) Chaperone protein dnaJ| Length = 350 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTG 205 T CP+C GRG L+ CP C G G Sbjct: 166 TACPHCKGRGYLLAETCPACRGRG 189
>DNAJ1_THET8 (Q5SLW9) Chaperone protein dnaJ 1| Length = 350 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTG 205 T CP+C GRG L+ CP C G G Sbjct: 166 TACPHCKGRGYLLAETCPACRGRG 189
>DNAJ_RHOS7 (O08356) Chaperone protein dnaJ| Length = 379 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP+C GRG+ + CP C G+G Sbjct: 187 CPSCQGRGQTIEDPCPSCTGSG 208
>DNAJ_RHOPA (Q6NCY3) Chaperone protein dnaJ| Length = 379 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP+C GRG+ + CP C G+G Sbjct: 187 CPSCQGRGQTIEDPCPSCTGSG 208
>DNAJ_RHILE (O33529) Chaperone protein dnaJ (Fragment)| Length = 234 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+GRG+++ CP C G G Sbjct: 188 CPTCHGRGQIIPDPCPKCHGQG 209
>DNAJ_BACFR (Q64VI7) Chaperone protein dnaJ| Length = 394 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGV 202 T CP C G GK++ C +C G G+ Sbjct: 206 TTCPTCNGEGKIIKDKCKVCGGEGI 230
>DNAJ_BACFN (Q5LED4) Chaperone protein dnaJ| Length = 394 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGV 202 T CP C G GK++ C +C G G+ Sbjct: 206 TTCPTCNGEGKIIKDKCKVCGGEGI 230
>DNAJ_BRAJA (P94319) Chaperone protein dnaJ| Length = 377 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C GRG+++ CP C G G Sbjct: 187 CPGCQGRGQMIEDACPSCSGQG 208
>DNAJ_GLOVI (Q7NDG8) Chaperone protein dnaJ| Length = 383 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CPNC G G+++ CP C G G Sbjct: 195 CPNCQGTGEVIESPCPTCSGRG 216
>DNAJ_CHLTE (Q8KCD8) Chaperone protein dnaJ| Length = 403 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTGVPNNKGLLR 178 CP C G G++V CP C G G+ + ++ Sbjct: 214 CPTCGGEGRVVKDRCPSCYGEGIKQGEATVK 244
>Y1198_METJA (Q58598) Hypothetical protein MJ1198| Length = 761 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 5/25 (20%) Frame = -1 Query: 264 ECPNCYGRGKLV-----CPICLGTG 205 +CP C G GK V CP+C GTG Sbjct: 4 KCPICDGTGKKVVKYKTCPVCEGTG 28
>DNAJ_SYNPX (Q7UA76) Chaperone protein dnaJ| Length = 377 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = -1 Query: 273 EFTECPNCYGRGKLV---CPICLGTGVPNNKGLLR 178 + ECPNC G G+++ C C G GV + LR Sbjct: 185 QVAECPNCGGTGQVIADPCNACGGQGVRQVRKKLR 219
>DNAJ_VIBVY (Q7MN84) Chaperone protein dnaJ| Length = 381 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G+GK++ C +C G G Sbjct: 188 CPTCHGKGKIIKDPCNVCHGQG 209
>DNAJ_VIBVU (Q8DF67) Chaperone protein dnaJ| Length = 381 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G+GK++ C +C G G Sbjct: 188 CPTCHGKGKIIKDPCNVCHGQG 209
>DNAJ_VIBCH (O34242) Chaperone protein dnaJ| Length = 381 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G+GK++ C +C G G Sbjct: 188 CPTCHGKGKIIKDPCNVCHGQG 209
>DNAJ_METMA (P35515) Chaperone protein dnaJ| Length = 389 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTG 205 T C C+GRG++V CP C G G Sbjct: 185 TTCSACHGRGQVVESPCPTCSGAG 208
>DNAJ_THETN (Q8RB67) Chaperone protein dnaJ| Length = 384 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = -1 Query: 279 IYEFTECPNCYGRGKLV---CPICLGTG 205 I CP C+G GK++ C C GTG Sbjct: 192 IVNIRTCPRCHGEGKIITDPCQKCGGTG 219
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = -3 Query: 244 PREAGLPDLSRNRRAQQQRT---PAATWRQRAAGQ 149 PR + + R RAQQ R PA TWR R +GQ Sbjct: 94 PRRSTEAEARRPPRAQQPRRVQPPAQTWRSRPSGQ 128
>DNAJ_PHOPR (Q6LUA6) Chaperone protein dnaJ| Length = 380 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP+C+GRGK++ C C G G Sbjct: 187 CPHCHGRGKIIKDPCNSCHGQG 208
>DNAJ_GLUOX (Q5FSL4) Chaperone protein dnaJ| Length = 380 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G G+ V C +C GTG Sbjct: 189 CPTCHGSGRTVANPCKVCHGTG 210
>DNAJ_SHEON (Q8EHT6) Chaperone protein dnaJ| Length = 378 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+GRGK++ C C G G Sbjct: 186 CPTCHGRGKIIKDPCAKCHGDG 207
>DNAJ_RHILO (Q98DD2) Chaperone protein dnaJ| Length = 376 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C GRG+ + CP C G G Sbjct: 185 CPQCQGRGQTIKDPCPKCAGQG 206
>DNAJ_HAEDU (P48208) Chaperone protein dnaJ| Length = 377 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 11/30 (36%) Frame = -1 Query: 261 CPNCYGRGKL-----------VCPICLGTG 205 CP+C+G G++ VCP C GTG Sbjct: 164 CPHCHGAGRIRRQQGFFVTEAVCPSCHGTG 193
>ASM_HUMAN (P17405) Sphingomyelin phosphodiesterase precursor (EC 3.1.4.12)| (Acid sphingomyelinase) (aSMase) Length = 629 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 Query: 249 YGRGKLVCPICLGTGVPNNKGLLRRP 172 +G G L CPIC G N GL + P Sbjct: 82 FGWGNLTCPICKGLFTAINLGLKKEP 107
>DNAJ_BARHE (Q6G553) Chaperone protein dnaJ| Length = 381 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGT-GVPNNKGL 184 CP C+GRG+ + CP C GT V N+ L Sbjct: 187 CPVCHGRGETIKDPCPKCQGTRRVEKNRSL 216
>DNAJ1_MYCTU (P0A548) Chaperone protein dnaJ 1| Length = 395 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 7/32 (21%) Frame = -1 Query: 261 CPNCYGRGKL------VCPICLGTGVPN-NKG 187 C NC+G G VCP C G+GV N N+G Sbjct: 177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQG 208
>DNAJ1_MYCBO (P0A549) Chaperone protein dnaJ 1| Length = 395 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 7/32 (21%) Frame = -1 Query: 261 CPNCYGRGKL------VCPICLGTGVPN-NKG 187 C NC+G G VCP C G+GV N N+G Sbjct: 177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQG 208
>E434_ADE02 (P03239) Early E4 34 kDa protein| Length = 294 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 120 SWAIACHCTSCPAALWRQVAAGVLCCWARRFRD 218 SWA+ CHC+S P +L VL W R D Sbjct: 119 SWALHCHCSS-PGSLQCIAGGQVLASWFRMVVD 150
>MAS5_YEAST (P25491) Mitochondrial protein import protein MAS5 (Yeast dnaJ| protein 1) Length = 409 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Frame = -1 Query: 309 KALNRKRAKDIYEF-TECPNCYGRGKLV-----CPICLGTGVPNNKGLLR---RPGAKE 160 K + R+ I F TEC C+G G ++ C C G V N + +L PG K+ Sbjct: 168 KFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKD 226
>DNAJ_FUSNP (Q70WY6) Chaperone protein dnaJ| Length = 394 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -1 Query: 261 CPNCYGRGKL---VCPICLGTGVPNNKGLLRRPGAKELLDKMYN 139 CP+C+G GK+ C C GTG AKE ++K N Sbjct: 205 CPDCHGTGKVPEKKCKHCRGTGT-----------AKETVEKKIN 237
>DNAJ_DEIRA (Q9RUG2) Chaperone protein dnaJ| Length = 376 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 7/38 (18%) Frame = -1 Query: 297 RKRAKDIYEFTE----CPNCYGRGKLV---CPICLGTG 205 R +A+ I+ E CP C G GK+V C +C G G Sbjct: 175 RGQARTIFGVVETQQVCPTCKGDGKMVVDPCTVCHGRG 212
>AMBP_PIG (P04366) AMBP protein precursor [Contains: Alpha-1-microglobulin;| Inter-alpha-trypsin inhibitor light chain (ITI-LC) (Bikunin) (HI-30) (EI-14)] (Fragment) Length = 337 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 165 WRQVAAGVLCCWARRFRDK 221 W VA G C W +RF+DK Sbjct: 29 WFHVAVGSTCPWLKRFKDK 47
>ORC1_KLULA (P54788) Origin recognition complex subunit 1| Length = 886 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 328 WWHRKMEGSQPKASKRYLRIYRMPKLLRP 242 ++ K+ S PK S YLR +PKL +P Sbjct: 195 FFEEKIRSSNPKVSLEYLRDITLPKLPKP 223
>DNAJ_GEOKA (Q5KWZ8) Chaperone protein dnaJ| Length = 382 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 15/36 (41%) Frame = -1 Query: 267 TECPNCYGRGKL---------------VCPICLGTG 205 T CP+C+G G++ CP+C GTG Sbjct: 165 TSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTG 200
>DNAJ2_NOCFA (Q5YNI2) Chaperone protein dnaJ 2| Length = 385 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 6/26 (23%) Frame = -1 Query: 261 CPNCYGRGKL------VCPICLGTGV 202 C C+G G VCPIC GTGV Sbjct: 168 CTTCHGSGAKPGTSPRVCPICNGTGV 193
>V002_FOWPV (Q9ICF9) Hypothetical protein FPV002/FPV259| Length = 222 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = +3 Query: 75 PILLAMQYRRRYVSTSWAIACHCTSCPAALWRQVAAGVLC----CWARRF 212 P+L+ ++ RR + + C C P L R+ +C W R F Sbjct: 65 PLLIIREFWRRVILPTLKATCDCIRLPCVLTRRFCKRTICPLAKSWCRCF 114
>DNAJ_PROMP (Q7V3Q3) Chaperone protein dnaJ| Length = 374 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -1 Query: 273 EFTECPNCYGRGKLV---CPICLGTGVPNNKGLLR 178 + ECP C G G+++ C C G GV + LR Sbjct: 184 QVAECPTCNGVGQIISDPCTSCGGNGVKQVRKKLR 218
>DNAJ_ERWCT (Q6D0B8) Chaperone protein dnaJ| Length = 379 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP+C+GRGK++ C C G G Sbjct: 186 CPHCHGRGKIIKDPCIKCHGHG 207
>DNAJ_FUSNN (Q8RH03) Chaperone protein dnaJ| Length = 392 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -1 Query: 261 CPNCYGRGKL---VCPICLGTGVPNNKGLLRRPGAKELLDKMYN 139 CP+C+G GK+ C C GTG AKE ++K N Sbjct: 203 CPDCHGTGKVPEKKCKHCHGTGT-----------AKETVEKKVN 235
>BCL9_DROME (Q961D9) Bcl-9 homolog (Protein legless)| Length = 1469 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 246 GRGKLVCPICLGTGVPNNKGLLRRPGAKELL 154 G G +CP G P GL+ PGA +L Sbjct: 1195 GNGSPICPPSASDGTPGMPGLMAGPGAGGML 1225
>DNAJ_XANOR (Q5H185) Chaperone protein dnaJ| Length = 376 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG-VPNNKGL 184 CP+C GRG L+ C C G G V NK L Sbjct: 183 CPHCDGRGTLIQNPCKTCHGAGRVEENKVL 212
>DNAJ_BORPA (Q7W520) Chaperone protein dnaJ| Length = 377 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G GK + CP C G G Sbjct: 189 CPTCHGTGKEITDPCPSCDGVG 210
>DNAJ_BORBU (P28616) Chaperone protein dnaJ| Length = 364 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTG 205 T C CYG GK++ C C G G Sbjct: 185 TTCSKCYGEGKIISNPCKSCKGKG 208
>DNAJ_PORGI (Q9XCA6) Chaperone protein dnaJ| Length = 383 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTGVPNNKGLLR---RPGAKELLDKMYNGK 133 CP C+G G+++ C C G GV + ++ G E + NGK Sbjct: 197 CPTCHGEGEIITKPCSKCKGEGVEIGEEVISFHIPAGVAEGMQMSVNGK 245
>Y093_MYCTU (Q10890) Hypothetical protein Rv0093c/MT0102| Length = 282 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 114 STSWAIACHCTSCPAALWRQVAAGV 188 STSW+IA AALW AAG+ Sbjct: 170 STSWSIALGVIMVGAALWPSAAAGL 194
>DNAJ_BORBR (Q7WGI5) Chaperone protein dnaJ| Length = 373 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G GK + CP C G G Sbjct: 185 CPTCHGTGKEITDPCPSCDGVG 206
>RNG_HAEIN (P45175) Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial| filament protein) Length = 491 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = -1 Query: 303 LNRKRAKDIYEFT---ECPNCYGRGKL 232 + RKR ++ E ECP C+GRG++ Sbjct: 389 MTRKRTRESLEHVLCDECPTCHGRGRV 415
>DNAJ_PARUW (Q6ME07) Chaperone protein dnaJ| Length = 386 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTGVPNNK 190 CP C+G GK++ C C G G K Sbjct: 198 CPKCHGEGKVITDPCKNCKGQGAVKEK 224
>DNAJ_BORPE (Q7VVY3) Chaperone protein dnaJ| Length = 385 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G GK + CP C G G Sbjct: 197 CPTCHGTGKEITDPCPSCDGVG 218
>TILS_COXBU (Q83BJ9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 449 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/32 (28%), Positives = 19/32 (59%) Frame = +2 Query: 35 ITPSRKSSAFKSWPYTSGYAVPKTLCIYELGN 130 +TP R+ + + W Y G+ +P+T + ++ N Sbjct: 263 LTPERQRNVLRRWIYLHGFQLPQTKQLEQIRN 294
>DNAJ_VIBF1 (Q5E3A8) Chaperone protein dnaJ| Length = 379 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G+GK++ C C G G Sbjct: 186 CPTCHGKGKIIKDPCNSCHGEG 207
>DNAJ_ACEAC (Q75WD2) Chaperone protein dnaJ| Length = 379 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G GK+V C C G G Sbjct: 188 CPTCHGAGKVVKNPCKFCHGEG 209
>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)| Length = 757 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = -2 Query: 305 LSTESEQKIFTNLQNAQIATAAGS---WSARFVSEPACPTTKDSCGD 174 +STE+E ++ ++++ AGS WS FV E P T +S G+ Sbjct: 281 MSTENE------IRRKRLSSQAGSLPGWSGSFVMEDCVPNTLNSLGE 321
>RNG_SHIFL (P0A9J3) Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial| filament protein) Length = 488 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = -1 Query: 303 LNRKRAKDIYEFT---ECPNCYGRG--KLVCPIC 217 + RKR ++ E ECP C+GRG K V +C Sbjct: 387 MTRKRTRESIEHVLCNECPTCHGRGTVKTVETVC 420
>RNG_ECOLI (P0A9J0) Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial| filament protein) Length = 488 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = -1 Query: 303 LNRKRAKDIYEFT---ECPNCYGRG--KLVCPIC 217 + RKR ++ E ECP C+GRG K V +C Sbjct: 387 MTRKRTRESIEHVLCNECPTCHGRGTVKTVETVC 420
>RNG_ECOL6 (P0A9J1) Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial| filament protein) Length = 488 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = -1 Query: 303 LNRKRAKDIYEFT---ECPNCYGRG--KLVCPIC 217 + RKR ++ E ECP C+GRG K V +C Sbjct: 387 MTRKRTRESIEHVLCNECPTCHGRGTVKTVETVC 420
>RNG_ECO57 (P0A9J2) Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial| filament protein) Length = 488 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = -1 Query: 303 LNRKRAKDIYEFT---ECPNCYGRG--KLVCPIC 217 + RKR ++ E ECP C+GRG K V +C Sbjct: 387 MTRKRTRESIEHVLCNECPTCHGRGTVKTVETVC 420
>DNAJ_BACTN (Q8A8C3) Chaperone protein dnaJ| Length = 396 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 3/25 (12%) Frame = -1 Query: 267 TECPNCYGRGKLV---CPICLGTGV 202 T CP C G GK++ C C G G+ Sbjct: 208 TTCPTCNGEGKIIKNKCKECGGDGI 232
>DNAJ1_STRAW (Q82EX7) Chaperone protein dnaJ 1| Length = 396 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP+C GRG + C IC G+G Sbjct: 215 CPDCKGRGLIAENPCEICKGSG 236
>DNAJ_VIBHA (O87385) Chaperone protein dnaJ| Length = 385 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%) Frame = -1 Query: 261 CPNCYGRGKLV--CPICLGTG 205 CP C+G+GK++ C C G G Sbjct: 189 CPTCHGKGKIIRPCNECHGQG 209
>DNAJ_PSEPK (Q88DU3) Chaperone protein dnaJ| Length = 375 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = -1 Query: 261 CPNCYGRGKLV---CPICLGTG 205 CP C+G+GK++ C C G G Sbjct: 186 CPRCHGQGKIITDPCTSCHGEG 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,312,799 Number of Sequences: 219361 Number of extensions: 1018038 Number of successful extensions: 3469 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 3361 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3464 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
