ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0c03 |
|---|---|
| Clone Library Name | barley_pub |
>AROA1_TOBAC (P23981) 3-phosphoshikimate 1-carboxyvinyltransferase 1,| chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) Length = 518 Score = 72.8 bits (177), Expect = 2e-13 Identities = 32/40 (80%), Positives = 36/40 (90%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VPVTI+DPGCTRKTFPNYFDVL + K+ Sbjct: 479 MAMAFSLAACADVPVTIKDPGCTRKTFPNYFDVLQQYSKH 518
>AROA_PETHY (P11043) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast| precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) Length = 516 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/40 (80%), Positives = 35/40 (87%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VPVTI DPGCTRKTFPNYFDVL + K+ Sbjct: 477 MAMAFSLAACADVPVTINDPGCTRKTFPNYFDVLQQYSKH 516
>AROA2_TOBAC (P23281) 3-phosphoshikimate 1-carboxyvinyltransferase 2 (EC| 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 2) (EPSP synthase 2) (Fragment) Length = 338 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/40 (80%), Positives = 35/40 (87%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VPVTI DPGCTRKTFPNYFDVL + K+ Sbjct: 299 MAMAFSLAACADVPVTINDPGCTRKTFPNYFDVLQQYSKH 338
>AROA_BRANA (P17688) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast| precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) Length = 516 Score = 68.9 bits (167), Expect = 3e-12 Identities = 30/40 (75%), Positives = 35/40 (87%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VPVTI+DPGCTRKTFP+YF VL + K+ Sbjct: 477 MAMAFSLAACADVPVTIKDPGCTRKTFPDYFQVLESITKH 516
>AROA_LYCES (P10748) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast| precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) Length = 520 Score = 67.4 bits (163), Expect = 9e-12 Identities = 29/40 (72%), Positives = 36/40 (90%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VPVTI++PGCTRKTFP+YF+VL + K+ Sbjct: 481 MAMAFSLAACADVPVTIKNPGCTRKTFPDYFEVLQKYSKH 520
>AROA_ARATH (P05466) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast| precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) Length = 520 Score = 63.9 bits (154), Expect = 1e-10 Identities = 28/40 (70%), Positives = 32/40 (80%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 M MAFSLAACA+VP+TI D GCTRKTFP+YF VL K+ Sbjct: 481 MAMAFSLAACADVPITINDSGCTRKTFPDYFQVLERITKH 520
>AROA_NEIMA (Q9JTT3) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 433 Score = 51.2 bits (121), Expect = 7e-07 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVK 181 M M FSL + +VPV I DP CT KTFP YFDV S+ + Sbjct: 392 MAMCFSLVSLLDVPVVINDPKCTHKTFPTYFDVFSSLTE 430
>AROA_AERSA (Q03321) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 50.8 bits (120), Expect = 9e-07 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLST 190 + M FSL A +++ VTI DPGCT KTFP+YFD L++ Sbjct: 387 IAMCFSLVALSDIAVTINDPGCTSKTFPDYFDKLAS 422
>AROA_VIBPA (Q87QX9) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 426 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVL 196 M M FSL A ++ PVTI DP CT KTFP+YFD L Sbjct: 388 MAMCFSLLALSDTPVTINDPKCTSKTFPDYFDKL 421
>AROA_NEIMB (Q9JYU1) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 433 Score = 49.7 bits (117), Expect = 2e-06 Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVK 181 M M FSL + VPV I DP CT KTFP YFDV S+ + Sbjct: 392 MAMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTE 430
>AROA_VIBCH (Q9KRB0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 426 Score = 49.7 bits (117), Expect = 2e-06 Identities = 21/32 (65%), Positives = 24/32 (75%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFD 202 M M FSL A ++ PVTI DP CT KTFP+YFD Sbjct: 388 MAMCFSLVALSDTPVTINDPKCTSKTFPDYFD 419
>AROA_VIBVY (Q7MJ45) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 428 Score = 49.7 bits (117), Expect = 2e-06 Identities = 21/36 (58%), Positives = 27/36 (75%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLST 190 + M FSL A ++ PVTI DP CT KTFP+YFD L++ Sbjct: 388 IAMCFSLVALSDTPVTINDPKCTSKTFPDYFDKLAS 423
>AROA_XENNE (Q8RLV9) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 428 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVL 196 + M FSL A + PVTI DPGCT KTFP+YF+ L Sbjct: 387 VAMCFSLVALSNTPVTILDPGCTAKTFPDYFNQL 420
>AROA_YERRU (Q93ED4) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_YEREN (P19688) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_SHISO (Q9ZFF7) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_SHIDY (O87006) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_SALTY (P07637) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_SALTI (P19786) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_SALGL (P22299) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_ECOLI (P0A6D3) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_ECOL6 (Q8FJB6) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_ECO57 (P0A6D4) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF+ L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLA 421
>AROA_EDWIC (Q9X4H2) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 428 Score = 47.8 bits (112), Expect = 7e-06 Identities = 21/31 (67%), Positives = 23/31 (74%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 M M FSL A + PVTI DPGCT KTFP+YF Sbjct: 388 MAMCFSLVALSGTPVTICDPGCTAKTFPDYF 418
>AROA_YERPE (Q60112) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 428 Score = 47.4 bits (111), Expect = 9e-06 Identities = 20/32 (62%), Positives = 24/32 (75%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFD 202 M M FSL A ++ PVTI DP CT KTFP+YF+ Sbjct: 388 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFE 419
>AROA_KLEPN (P24497) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 47.4 bits (111), Expect = 9e-06 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLS 193 M M FSL A ++ PVTI DP CT KTFP+YF L+ Sbjct: 387 MAMCFSLVALSDTPVTILDPKCTAKTFPDYFGQLA 421
>AROA_BORPE (P12421) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 442 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/33 (63%), Positives = 22/33 (66%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDV 199 M M FSLAA V I DPGC KTFP+YFDV Sbjct: 401 MAMCFSLAAFGPAAVRILDPGCVSKTFPDYFDV 433
>AROA_BORBR (Q9RND7) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 442 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/33 (63%), Positives = 22/33 (66%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDV 199 M M FSLAA V I DPGC KTFP+YFDV Sbjct: 401 MAMCFSLAAFGPAAVRILDPGCVSKTFPDYFDV 433
>AROA_RALSO (Q8Y0Y6) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 436 Score = 45.4 bits (106), Expect = 4e-05 Identities = 21/31 (67%), Positives = 21/31 (67%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 M MAFSLAA VPV I DP C KTFP YF Sbjct: 398 MAMAFSLAAFGPVPVRINDPRCVAKTFPEYF 428
>AROA_HAEDU (Q7VLN9) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 435 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 + M FSL A + VTI DP CTRKTFPNYF Sbjct: 395 IAMCFSLIALSNTAVTILDPQCTRKTFPNYF 425
>AROA_PASPI (Q8VP65) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 426 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVL 196 M M FSL A ++ VTI DP CT KTFP+YF L Sbjct: 388 MAMCFSLVALSDTAVTINDPKCTSKTFPDYFTKL 421
>AROA_HAESO (P52310) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 432 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 + M FSL A ++ VTI DP CT KTFP YF KN Sbjct: 392 IAMCFSLIALSDTSVTILDPACTAKTFPTYFSEFEKISKN 431
>AROA_HAEIN (Q03421) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 432 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFD 202 M M FSL A + PVTI DP CT KTFP +F+ Sbjct: 392 MAMCFSLIALSNTPVTILDPKCTAKTFPTFFN 423
>AROA_SHEON (Q8EEH8) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 426 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 M M FS+ A A+ +TI DP CT KTFP+YF Sbjct: 388 MAMCFSMLAFADCGITINDPDCTSKTFPDYF 418
>AROA_PASMU (Q04570) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 440 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFD 202 M M F+L A ++ VTI DP CT KTFP +FD Sbjct: 399 MAMCFALIALSQTSVTILDPSCTAKTFPTFFD 430
>AROA_PASHA (P54220) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 432 Score = 42.7 bits (99), Expect = 2e-04 Identities = 19/31 (61%), Positives = 20/31 (64%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 M M FSL A + VTI DP CT KTFP YF Sbjct: 393 MAMCFSLIALSNTEVTILDPNCTAKTFPTYF 423
>AROA_ANASP (Q8YMB5) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 425 Score = 40.0 bits (92), Expect = 0.002 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF 205 M MAF++ + I+DPGCT KTFP+YF Sbjct: 387 MAMAFAVTGLKTPGIVIQDPGCTAKTFPDYF 417
>AROA_BUCAI (P57396) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 36.6 bits (83), Expect = 0.017 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYF-DVLS 193 M M FSL + + V V I +P C KTFP+YF D LS Sbjct: 388 MAMCFSLISLSGVGVNILNPNCISKTFPSYFKDFLS 423
>AROA_BUCAP (Q59178) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 428 Score = 36.2 bits (82), Expect = 0.022 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFD 202 M M FSL + + V I +P C KTFP+YF+ Sbjct: 388 MAMCFSLICLSGISVRILNPNCISKTFPSYFE 419
>ARO1_PNECA (Q12659) Pentafunctional AROM polypeptide [Includes:| 3-dehydroquinate synthase (EC 4.2.3.4); 3-dehydroquinate dehydratase (EC 4.2.1.10) (3-dehydroquinase); Shikimate dehydrogenase (EC 1.1.1.25); Shikimate kinase (EC 2.7.1.71); 3-phosphoshikima Length = 1581 Score = 35.8 bits (81), Expect = 0.028 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = -3 Query: 297 MXMAFSLAAC-AEVPVTIRDPGCTRKTFPNYFDVLSTFVK 181 + M+FS+ AC + P TI D C KT+P ++D+L++ K Sbjct: 805 IAMSFSVLACISSKPTTILDKACVNKTWPYWWDILNSTFK 844
>AROA1_STRCO (Q9L213) 3-phosphoshikimate 1-carboxyvinyltransferase 1 (EC| 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) (EPSPS 1) Length = 440 Score = 33.5 bits (75), Expect = 0.14 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLST 190 + M F++ V I+DPGC K+FP ++ L T Sbjct: 396 IAMTFAIGGLRTEGVVIKDPGCVAKSFPAFWQTLDT 431
>AROA_BUCBP (P59416) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 33.1 bits (74), Expect = 0.18 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVLST 190 + M F+L A + + VT+ + C KTFP+YF L + Sbjct: 388 IAMCFALIALSGIKVTLLNYKCVNKTFPDYFQKLKS 423
>AROA_CHLCV (Q822G0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 446 Score = 31.6 bits (70), Expect = 0.54 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 297 MXMAFSLAAC-AEVPVTIRDPGCTRKTFPNYFDVLSTFVKN 178 + MA S+AA A +I D C +KTFPN+ +L++ N Sbjct: 381 IAMALSIAAMHASGDSSISDTECVKKTFPNFIQILNSLHAN 421
>AROA2_BACHD (Q9K9D5) 3-phosphoshikimate 1-carboxyvinyltransferase 2 (EC| 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 2) (EPSP synthase 2) (EPSPS 2) Length = 447 Score = 31.2 bits (69), Expect = 0.70 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 297 MXMAFSLAACAEVPVTIRDPGCTRKTFPNYFDVL 196 + M+ SL + + DPGC KT P+YF +L Sbjct: 404 VAMSLSLIGTKVKGLRLNDPGCVAKTCPSYFQLL 437
>PSCD_CHLLT (Q46139) P840 reaction center 17 kDa protein| Length = 143 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 253 DHQGPRVHPKDLPQLLRRPKHICQELDRRIY 161 D +G + +D+P R K +C ELD RIY Sbjct: 106 DKRGVKWTMRDIPVFYREGKGLCVELDNRIY 136
>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 410 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 297 MXMAFSLAAC-AEVPVTIRDPGCTRKTFPNYFDVLSTFV 184 M M FS+A +E V ++D C +FPN++++L V Sbjct: 370 MAMLFSIAGLVSEEGVDVKDHECVAVSFPNFYELLERVV 408
>ZN553_HUMAN (Q96MX3) Zinc finger protein 553| Length = 618 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 Query: 25 HLILHQGQRTTKLILKTHTPSREKTKKTKNPHTMDRGYRSTSAIRR 162 H H+G++ + ++ PSR T T+ P D+ Y T +R Sbjct: 238 HQRTHRGEQPPRPVVPRRQPSRAATAATQGPKAQDKPYICTDCGKR 283
>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4 kinase) Length = 1007 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +1 Query: 85 SREKTKKTKNPHTMDRGYRSTSAIRRR 165 SR +++++P DRG RS S +RRR Sbjct: 458 SRSPRRRSRSPRRRDRGRRSRSRLRRR 484
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit| Length = 940 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +1 Query: 4 KRIQCAIHLILHQGQRTTKLILKTHTPS-REKTKKTKNPHTMDRGYRSTSAIRRRFSDLV 180 KR+ ++ + ++ T + LK T +++ KNP ++D A+ R + V Sbjct: 18 KRVAEYVNTLSDNVEKLTDVELKAKTDEFKQRLADEKNPESLDDLLPEAFAVAREAAWRV 77 Query: 181 LDKCA*DVEVVG 216 LD+ DV+V+G Sbjct: 78 LDQRPFDVQVMG 89
>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34| Length = 515 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 208 VVGEGLSGAPGVPDGHWHLSAGRQGEG 288 ++G+G +GAPG P G L G G G Sbjct: 113 LIGDGANGAPGQPGGPGGLLYGNGGNG 139
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 70 KTHTPSREKTKKTKNPHTMDRGYRSTSAIRRR 165 ++ TPSR ++ T R RS SA+RRR Sbjct: 1955 RSRTPSRRSRTPSRRSRTPSRRRRSRSAVRRR 1986
>ZN406_MOUSE (Q7TS63) Zinc finger protein 406| Length = 1219 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -2 Query: 250 HQGPRVHPKDLPQLLRRPKH--ICQELDRRIYGELRLYFCSPCPWYE 116 H G K L L ++ + +C+ + R++YG+L +C WY+ Sbjct: 697 HPGSTAFMKVLDSLQKKQMNTSLCERI-RKVYGDLECEYCGKLFWYQ 742
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +1 Query: 205 EVVGEGLSGAPGVPDGHWHLSAGRQGEGHR 294 E+ E SGAPGVP G+ + G +GEG R Sbjct: 14 EIKMEEESGAPGVPSGNG--APGPKGEGER 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,716,951 Number of Sequences: 219361 Number of extensions: 784129 Number of successful extensions: 2591 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 2542 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2591 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
