ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41p19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
2dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
3dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence 202 8e-49
5gb|AY105159.1| Zea mays PCO075778 mRNA sequence 202 8e-49
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
7dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
8dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
9gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, comp... 46 0.11
10dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.7
11gb|AY380839.1| Leifsonia xyli subsp. cynodontis plasmid pCXC100 ... 40 6.7
12gb|BC068332.1| Danio rerio zgc:85626, mRNA (cDNA clone MGC:85626... 40 6.7
13ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.7
14gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete se... 40 6.7
15emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 i... 40 6.7
16emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in... 40 6.7
17gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 6.7
18gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotea... 40 6.7
19ref|XM_681635.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 6.7
20ref|XM_703423.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 6.7
21ref|XM_681286.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 6.7
22ref|XM_703300.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 6.7
23ref|NM_213321.1| Danio rerio zgc:85626 (zgc:85626), mRNA 40 6.7
24gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, compl... 40 6.7
25gb|U21228.1|CVPCG1408 Promoter-probe vector pCG1408, complete se... 40 6.7
26emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in ... 40 6.7
27gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 6.7
28gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence 40 6.7
29emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 ... 40 6.7 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  220 bits (111), Expect = 3e-54
 Identities = 222/259 (85%)
 Strand = Plus / Minus

                                                                           
Query: 226     ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 285
               |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 2978646 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 2978587

                                                                           
Query: 286     atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 345
               |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 2978586 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 2978527

                                                                           
Query: 346     ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 405
               ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 2978526 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 2978467

                                                                           
Query: 406     tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 465
               ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 2978466 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 2978407

                                  
Query: 466     agctggctggacaccctcc 484
               ||||||| ||| |||||||
Sbjct: 2978406 agctggccggaaaccctcc 2978388
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>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score =  220 bits (111), Expect = 3e-54
 Identities = 222/259 (85%)
 Strand = Plus / Minus

                                                                         
Query: 226   ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 285
             |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 24701 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 24642

                                                                         
Query: 286   atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 345
             |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 24641 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 24582

                                                                         
Query: 346   ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 405
             ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 24581 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 24522

                                                                         
Query: 406   tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 465
             ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 24521 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 24462

                                
Query: 466   agctggctggacaccctcc 484
             ||||||| ||| |||||||
Sbjct: 24461 agctggccggaaaccctcc 24443
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>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full
            insert sequence
          Length = 1364

 Score =  220 bits (111), Expect = 3e-54
 Identities = 222/259 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 285
            |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 1175 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 1116

                                                                        
Query: 286  atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 345
            |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 1115 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 1056

                                                                        
Query: 346  ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 405
            ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 1055 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 996

                                                                        
Query: 406  tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 465
            ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 995  tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 936

                               
Query: 466  agctggctggacaccctcc 484
            ||||||| ||| |||||||
Sbjct: 935  agctggccggaaaccctcc 917
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>gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence
          Length = 711

 Score =  202 bits (102), Expect = 8e-49
 Identities = 216/254 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 285
           |||||||| |||||||||||||| ||| | |||||||||||||||| ||  || || |||
Sbjct: 652 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 593

                                                                       
Query: 286 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 345
           |||||||||||||| ||||| |||||  | ||| |||||||||| |||||||||||||| 
Sbjct: 592 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 533

                                                                       
Query: 346 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 405
           || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| 
Sbjct: 532 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 473

                                                                       
Query: 406 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 465
            |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||  |||| 
Sbjct: 472 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 413

                         
Query: 466 agctggctggacac 479
           ||||||||||||||
Sbjct: 412 agctggctggacac 399
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>gb|AY105159.1| Zea mays PCO075778 mRNA sequence
          Length = 604

 Score =  202 bits (102), Expect = 8e-49
 Identities = 216/254 (85%)
 Strand = Plus / Plus

                                                                       
Query: 226 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 285
           |||||||| |||||||||||||| ||| | |||||||||||||||| ||  || || |||
Sbjct: 182 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 241

                                                                       
Query: 286 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 345
           |||||||||||||| ||||| |||||  | ||| |||||||||| |||||||||||||| 
Sbjct: 242 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 301

                                                                       
Query: 346 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 405
           || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| 
Sbjct: 302 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 361

                                                                       
Query: 406 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 465
            |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||  |||| 
Sbjct: 362 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 421

                         
Query: 466 agctggctggacac 479
           ||||||||||||||
Sbjct: 422 agctggctggacac 435
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                            
Query: 282      gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 341
                |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 23298054 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23298113

                                                                            
Query: 342      gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 401
                ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 23298114 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23298173

                                                                            
Query: 402      gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 461
                ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 23298174 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23298233

                                       
Query: 462      cttgagctggctggacaccctcc 484
                ||| |||||||||||||||||||
Sbjct: 23298234 cttcagctggctggacaccctcc 23298256
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 282   gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 341
             |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 23752 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23811

                                                                         
Query: 342   gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 401
             ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 23812 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23871

                                                                         
Query: 402   gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 461
             ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 23872 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23931

                                    
Query: 462   cttgagctggctggacaccctcc 484
             ||| |||||||||||||||||||
Sbjct: 23932 cttcagctggctggacaccctcc 23954
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>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451D05
          Length = 148381

 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 282   gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 341
             |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 84796 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 84855

                                                                         
Query: 342   gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 401
             ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 84856 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 84915

                                                                         
Query: 402   gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 461
             ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 84916 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 84975

                                    
Query: 462   cttgagctggctggacaccctcc 484
             ||| |||||||||||||||||||
Sbjct: 84976 cttcagctggctggacaccctcc 84998
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>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence
          Length = 230293

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 324    gaggatcccccagcagctgtgcc 346
              |||||||||||||||||||||||
Sbjct: 190376 gaggatcccccagcagctgtgcc 190398
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>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 448    gcgccctcctctgtcttgagc 468
              |||||||||||||||||||||
Sbjct: 118037 gcgccctcctctgtcttgagc 118017
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>gb|AY380839.1| Leifsonia xyli subsp. cynodontis plasmid pCXC100 RepA, putative
            plasmid partition protein ParA, and putative plasmid
            related protein genes, complete cds; and unknown genes
          Length = 4992

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 468  ctggctggacaccctcctcg 487
            ||||||||||||||||||||
Sbjct: 1521 ctggctggacaccctcctcg 1540
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>gb|BC068332.1| Danio rerio zgc:85626, mRNA (cDNA clone MGC:85626 IMAGE:6525318),
            complete cds
          Length = 1888

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1565 agtgttgaaggtttatttat 1546
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>ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3584.2), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 gaggatgagctcggcgagtg 301
           ||||||||||||||||||||
Sbjct: 129 gaggatgagctcggcgagtg 148
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>gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete sequence
          Length = 28233

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 331   ccccagcagctgtgcccggttgcaacgtagcatcccttcaccccgggcatttcccc 386
             ||||| ||| ||||||| || ||||| || || |||||||||||||| || |||||
Sbjct: 16855 ccccaacagttgtgcccagtggcaacataacaacccttcaccccgggaatctcccc 16800
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>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24
              Contains part of a novel gene similar to human DECR2
              (peroxisomal 2,4-dienoyl CoA reductase 2),  a novel gene
              similar to human KIAA0665, a novel gene similar to human
              KIAA0683, a novel gene similar to human KIAA0590, part of a
              novel gene and three CpG islands, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     agtgttgaaggtttatttat 54
              ||||||||||||||||||||
Sbjct: 153628 agtgttgaaggtttatttat 153647
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>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5,
             complete sequence
          Length = 168673

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   tcttcttgttgttgagaaat 234
             ||||||||||||||||||||
Sbjct: 22893 tcttcttgttgttgagaaat 22874
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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   tgagctggctggacaccctc 483
             ||||||||||||||||||||
Sbjct: 86896 tgagctggctggacaccctc 86915
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>gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotease ANPC gene,
            complete cds
          Length = 4688

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  gaggatgagctcggcgagtg 301
            ||||||||||||||||||||
Sbjct: 3889 gaggatgagctcggcgagtg 3908
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>ref|XM_681635.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 1 (LOC573514), mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1583 agtgttgaaggtttatttat 1564
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>ref|XM_703423.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 2 (LOC573514), mRNA
          Length = 1796

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1531 agtgttgaaggtttatttat 1512
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>ref|XM_681286.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 1 (LOC573411), mRNA
          Length = 1846

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1581 agtgttgaaggtttatttat 1562
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>ref|XM_703300.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 2 (LOC573411), mRNA
          Length = 1794

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1529 agtgttgaaggtttatttat 1510
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>ref|NM_213321.1| Danio rerio zgc:85626 (zgc:85626), mRNA
          Length = 1888

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgttgaaggtttatttat 54
            ||||||||||||||||||||
Sbjct: 1565 agtgttgaaggtttatttat 1546
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>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   ttcttgttgttgagaaatct 236
             ||||||||||||||||||||
Sbjct: 68733 ttcttgttgttgagaaatct 68714
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>gb|U21228.1|CVPCG1408 Promoter-probe vector pCG1408, complete sequence
          Length = 9113

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 468  ctggctggacaccctcctcg 487
            ||||||||||||||||||||
Sbjct: 6978 ctggctggacaccctcctcg 6997
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>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24,
             complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    agtgttgaaggtttatttat 54
             ||||||||||||||||||||
Sbjct: 37735 agtgttgaaggtttatttat 37716
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>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete
            sequence
          Length = 142317

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 93   tacattatttgatttggtgtcccc 116
            ||||||||||||||| ||||||||
Sbjct: 3519 tacattatttgattttgtgtcccc 3496
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>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence
          Length = 83030

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  tgagctggctggacaccctc 483
            ||||||||||||||||||||
Sbjct: 8137 tgagctggctggacaccctc 8156
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>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24,
              complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     agtgttgaaggtttatttat 54
              ||||||||||||||||||||
Sbjct: 112391 agtgttgaaggtttatttat 112372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,612,557
Number of Sequences: 3902068
Number of extensions: 3612557
Number of successful extensions: 60327
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60238
Number of HSP's gapped (non-prelim): 89
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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