ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41o19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D01, full insert sequence Length = 1348 Score = 224 bits (113), Expect = 3e-55 Identities = 233/273 (85%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1103 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1044 Query: 411 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 470 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1043 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 984 Query: 471 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 530 |||||||||||||| |||||||| || |||| ||||||||| ||||| || || ||||| Sbjct: 983 tcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctca 924 Query: 531 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 590 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 923 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 864 Query: 591 tgtgtagtcagtacataaagaggaggagcaact 623 ||||| ||||| |||||||| ||||| |||||| Sbjct: 863 tgtgtggtcagcacataaagtggaggtgcaact 831
>dbj|AK073460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F15, full insert sequence Length = 1454 Score = 224 bits (113), Expect = 3e-55 Identities = 233/273 (85%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1187 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1128 Query: 411 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 470 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1127 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 1068 Query: 471 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 530 |||||||||||||| |||||||| || |||| ||||||||| ||||| || || ||||| Sbjct: 1067 tcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctca 1008 Query: 531 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 590 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1007 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 948 Query: 591 tgtgtagtcagtacataaagaggaggagcaact 623 ||||| ||||| |||||||| ||||| |||||| Sbjct: 947 tgtgtggtcagcacataaagtggaggtgcaact 915
>dbj|AK105818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D03, full insert sequence Length = 1377 Score = 216 bits (109), Expect = 7e-53 Identities = 232/273 (84%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1060 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1001 Query: 411 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 470 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1000 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 941 Query: 471 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 530 |||||||||||||| |||||||| || |||| ||||||||| ||| | || || ||||| Sbjct: 940 tcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcgatctca 881 Query: 531 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 590 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 880 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 821 Query: 591 tgtgtagtcagtacataaagaggaggagcaact 623 ||||| ||||| |||||||| ||||| |||||| Sbjct: 820 tgtgtggtcagcacataaagtggaggtgcaact 788
>emb|AJ867288.1| Oryza sativa (indica cultivar-group) mRNA for eukaryotic translation initiation factor 2 alpha (eIF2 alpha gene) Length = 1020 Score = 216 bits (109), Expect = 7e-53 Identities = 232/273 (84%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 995 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 936 Query: 411 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 470 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 935 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 876 Query: 471 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 530 |||||||||||||| |||||||| || |||| ||||||||| ||| | || || ||||| Sbjct: 875 tcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcgatctca 816 Query: 531 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 590 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 815 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 756 Query: 591 tgtgtagtcagtacataaagaggaggagcaact 623 ||||| ||||| |||||||| ||||| |||||| Sbjct: 755 tgtgtggtcagcacataaagtggaggtgcaact 723
>gb|AY103903.1| Zea mays PCO078161 mRNA sequence Length = 1384 Score = 202 bits (102), Expect = 1e-48 Identities = 240/286 (83%) Strand = Plus / Minus Query: 338 gacgccagagttcgtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatc 397 ||||||||| || ||||| |||| | ||||||||||||||||||||| |||||||| || Sbjct: 1146 gacgccagaatttgtaagatcaacgttgcccattcctgtatcttcctcctcttcactgtc 1087 Query: 398 atcatcaccagcaacctccgcgttttgctcaaccagggtatccaactgggcgttcaatag 457 | |||||| | ||||| |||||||| || | |||| ||| | |||| || ||||| Sbjct: 1086 cacgtcaccatcgacctctgcgttttgttccattagggaatcaatctggtcgaggaatag 1027 Query: 458 cttatcttccctctcactcacagctctaggtgcttctttcactaccaactttcctttgtg 517 ||| ||||||| ||| || |||||||| |||| ||| |||||||| ||||||||||||| Sbjct: 1026 cttgtcttcccgctcgctaacagctcttggtggttccttcactactaactttcctttgta 967 Query: 518 tttttcaatctctgctgtgcacgctttaactgcatcagtgagaactgagatgccttggtc 577 |||||||||||||||||| || || || |||||||||||||||||||| ||||||||||| Sbjct: 966 tttttcaatctctgctgtacaagccttgactgcatcagtgagaactgaaatgccttggtc 907 Query: 578 cttgtcgagagtttgtgtagtcagtacataaagaggaggagcaact 623 |||||| || || ||||| |||| |||||||| |||||||||||| Sbjct: 906 cttgtcaagggtctgtgtggtcaaaacataaagtggaggagcaact 861
>gb|BT016294.1| Zea mays clone Contig127 mRNA sequence Length = 1270 Score = 196 bits (99), Expect = 6e-47 Identities = 267/323 (82%) Strand = Plus / Minus Query: 301 ctcatccaagtcaactaatgtagactcagtccgcatggacgccagagttcgtaaggtcaa 360 ||||||||| ||||| | ||||| || ||| ||| ||||||||| || |||| ||| | Sbjct: 991 ctcatccaaatcaaccagtgtagccttagtaagcagcgacgccagaatttgtaatgtcga 932 Query: 361 tatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagcaacctccgcgt 420 || |||||||||||||||||||| |||||||| ||| |||||||| | ||||| |||| Sbjct: 931 cgtcccccattcctgtatcttcctcctcttcactgtcagcatcaccatcgacctctgcgt 872 Query: 421 tttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctctcactcacag 480 ||||||| | |||| ||| | |||| || |||||||| ||||||| |||||| |||| Sbjct: 871 tttgctccattagggaatcaatctggtcgaggaatagcttgtcttcccgctcactaacag 812 Query: 481 ctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtgcacg 540 |||| |||| ||| |||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 811 ctcttggtggttccttcactactaactttcctttgtacttttcaatctctgctgtacaag 752 Query: 541 ctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtttgtgtagtca 600 | || |||||| |||||||||||| |||||||| |||||||| || || ||||| |||| Sbjct: 751 ccttgactgcagtagtgagaactgaaatgccttgatccttgtcaagggtctgtgtggtca 692 Query: 601 gtacataaagaggaggagcaact 623 |||||||| |||||||||||| Sbjct: 691 aaacataaagtggaggagcaact 669
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 536 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 10347410 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 10347351 Query: 537 cacgctttaactgcatcagtgagaactgagatgccttggtcct 579 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 10347350 caagctttaattgcatcagtgagaactgaaatgccttggtcct 10347308 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 10347688 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 10347629 Query: 411 acctccgcgttttgctc 427 |||||||| |||||||| Sbjct: 10347628 acctccgcattttgctc 10347612 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 577 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaact 623 ||||||| ||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 10346543 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaact 10346497
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 536 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 3963 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 3904 Query: 537 cacgctttaactgcatcagtgagaactgagatgccttggtcct 579 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 3903 caagctttaattgcatcagtgagaactgaaatgccttggtcct 3861 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 4241 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 4182 Query: 411 acctccgcgttttgctc 427 |||||||| |||||||| Sbjct: 4181 acctccgcattttgctc 4165 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 577 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaact 623 ||||||| ||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 3096 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaact 3050
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 536 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 60876 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 60817 Query: 537 cacgctttaactgcatcagtgagaactgagatgccttggtcct 579 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 60816 caagctttaattgcatcagtgagaactgaaatgccttggtcct 60774 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 61154 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 61095 Query: 411 acctccgcgttttgctc 427 |||||||| |||||||| Sbjct: 61094 acctccgcattttgctc 61078 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 577 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaact 623 ||||||| ||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 60009 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaact 59963
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 536 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 10345511 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 10345452 Query: 537 cacgctttaactgcatcagtgagaactgagatgccttggtcct 579 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 10345451 caagctttaattgcatcagtgagaactgaaatgccttggtcct 10345409 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 351 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 410 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 10345789 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 10345730 Query: 411 acctccgcgttttgctc 427 |||||||| |||||||| Sbjct: 10345729 acctccgcattttgctc 10345713 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 577 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaact 623 ||||||| ||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 10344644 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaact 10344598
>gb|BT013965.1| Lycopersicon esculentum clone 132990R, mRNA sequence Length = 1427 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 356 gtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcacca 407 |||||| || ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 1148 gtcaatttctcccatacctgtatcttcctcctcttcactatcttcatcacca 1097
>ref|NM_185566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 468 ctctcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 526 ||||| |||||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 881 ctctcgctcacagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 823
>emb|CR378662.1| M.truncatula DNA sequence from clone MTH2-41N19 on chromosome 3, complete sequence Length = 119227 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 363 tcgcccattcctgtatcttcctcatcttcactatcatcatc 403 ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 100174 tcgcccattccagtatcttcttcctcttcactgtcatcatc 100134 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 363 tcgcccattcctgtatcttcctcatcttcactatcatcatc 403 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 114016 tcgcccattccagtatcttcttcctcttcactgtcttcatc 113976 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 363 tcgcccattcctgtatcttcctcatcttcactatcatcatc 403 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 108537 tcgcccattccagtatcttcttcctcttcactgtcgtcatc 108497
>gb|AC145994.2| Pan troglodytes BAC clone RP43-13J21 from 7, complete sequence Length = 164345 Score = 50.1 bits (25), Expect = 0.009 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 132 ataacaacaaaactattttcactccaaaga-aagaaaataa 171 |||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 112995 ataaaaacaaaactatattcactccaaagagaagaaaataa 112955
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence Length = 171530 Score = 50.1 bits (25), Expect = 0.009 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 132 ataacaacaaaactattttcactccaaaga-aagaaaataa 171 |||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 76766 ataaaaacaaaactatattcactccaaagagaagaaaataa 76806
>ref|XM_385771.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05595.1) partial mRNA Length = 1446 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 tcttcctcatcttcactatcatc 400 ||||||||||||||||||||||| Sbjct: 1076 tcttcctcatcttcactatcatc 1054
>emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, complete sequence Length = 38166 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 380 ttcctcatcttcactatcatcatcacc 406 |||||||| |||||||||||||||||| Sbjct: 36216 ttcctcattttcactatcatcatcacc 36190
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 386 atcttcactatcatcatcaccagcaac 412 |||||||||||||||||||||| |||| Sbjct: 9860 atcttcactatcatcatcaccatcaac 9834
>ref|NM_059940.2| Caenorhabditis elegans F43G9.12 (F43G9.12) mRNA, complete cds Length = 2637 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 380 ttcctcatcttcactatcatcatcacc 406 |||||||| |||||||||||||||||| Sbjct: 798 ttcctcattttcactatcatcatcacc 772
>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete sequences Length = 251753 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacc 406 ||||||||||||||||||||||| Sbjct: 93452 tcatcttcactatcatcatcacc 93474
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC, Nv-ZicD, Nv-ZicE, complete cds Length = 177971 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 381 tcctcatcttcactatcatcatcacca 407 ||||||||||||| ||||||||||||| Sbjct: 4118 tcctcatcttcaccatcatcatcacca 4144
>ref|XM_629330.1| Dictyostelium discoideum hypothetical protein (DDB0191785), partial mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 381 tcctcatcttcactatcatcat 402 |||||||||||||||||||||| Sbjct: 206 tcctcatcttcactatcatcat 185
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 526 ||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 29423101 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 29423150
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 477 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 526 ||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 86023 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 86072
>dbj|AP006109.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195a, complete sequence Length = 73192 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 caaagaaagaaaataaaatcag 177 |||||||||||||||||||||| Sbjct: 60796 caaagaaagaaaataaaatcag 60817
>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete sequence Length = 213187 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 aagaaaataaaatcaggtgctg 183 |||||||||||||||||||||| Sbjct: 89315 aagaaaataaaatcaggtgctg 89294
>ref|NM_119291.2| Arabidopsis thaliana transcription factor AT4G31420 transcript variant AT4G31420.1 mRNA, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>ref|NM_202923.1| Arabidopsis thaliana unknown protein AT4G31420 transcript variant AT4G31420.2 mRNA, complete cds Length = 1550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aagaaagaaaataaaatcagg 178 ||||||||||||||||||||| Sbjct: 52932 aagaaagaaaataaaatcagg 52952
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 tcctgtatcttcctcatcttc 391 ||||||||||||||||||||| Sbjct: 35786 tcctgtatcttcctcatcttc 35766
>ref|XM_631882.1| Dictyostelium discoideum hypothetical protein (DDB0219292), partial mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcaccag 408 |||||||||||||||||| |||||| Sbjct: 1895 tcatcttcactatcatcaacaccag 1871
>ref|XM_637779.1| Dictyostelium discoideum hypothetical protein (DDB0168302), partial mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 383 ctcatcttcactatcatcatcacca 407 |||||||| |||||||||||||||| Sbjct: 984 ctcatctttactatcatcatcacca 1008
>ref|XM_635283.1| Dictyostelium discoideum hypothetical protein (DDB0205052), partial mRNA Length = 1185 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 542 tcatcttcactatcatcatca 522
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aagaaagaaaataaaatcagg 178 ||||||||||||||||||||| Sbjct: 48642 aagaaagaaaataaaatcagg 48662
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcaccagcaac 412 ||||||||| |||||||||||||| |||| Sbjct: 116770 tcatcttcattatcatcatcaccatcaac 116798
>ref|XM_459254.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D19173g) partial mRNA Length = 3423 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 tcttcctcatcttcactatca 398 ||||||||||||||||||||| Sbjct: 1847 tcttcctcatcttcactatca 1827
>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence Length = 162400 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 tttcactccaaagaaagaaaa 168 ||||||||||||||||||||| Sbjct: 142730 tttcactccaaagaaagaaaa 142710
>gb|AC146457.3| Pan troglodytes BAC clone CH251-330N17 from Y, complete sequence Length = 162813 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 15613 tcactatcatcatcaccagca 15593
>gb|AC147663.3| Pan troglodytes BAC clone CH251-304A22 from Y, complete sequence Length = 162854 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 25982 tcactatcatcatcaccagca 26002
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 caaagaaagaaaataaaatca 176 ||||||||||||||||||||| Sbjct: 93482 caaagaaagaaaataaaatca 93462
>gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complement(3527391-3470188) strain AX4, complete sequence Length = 57203 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 383 ctcatcttcactatcatcatcacca 407 |||||||| |||||||||||||||| Sbjct: 33539 ctcatctttactatcatcatcacca 33515
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gtacaaagaacaccagcaaaa 65 ||||||||||||||||||||| Sbjct: 6192 gtacaaagaacaccagcaaaa 6172
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 132954 tcactatcatcatcaccagca 132934
>ref|XM_719918.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04682) partial mRNA Length = 3846 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tcttcctcatcttcactatcatcat 402 ||||| ||||||||||||||||||| Sbjct: 1085 tcttcatcatcttcactatcatcat 1061
>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence Length = 148930 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcaccagcaac 412 ||||||||| |||||||||||||| |||| Sbjct: 106319 tcatcttcattatcatcatcaccaccaac 106291 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||| ||||||||||||| Sbjct: 106262 tcatcttcaccatcatcatcacca 106239
>gb|AC115934.10| Mus musculus chromosome 3, clone RP24-539A2, complete sequence Length = 147659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 aagaaagaaaataaaatcagg 178 ||||||||||||||||||||| Sbjct: 12724 aagaaagaaaataaaatcagg 12704
>emb|AL627233.9| Human DNA sequence from clone RP11-305I2 on chromosome X Contains the CYLC1 gene for cylicin, basic protein of sperm head cytoskeleton 1, complete sequence Length = 75523 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 aaagaaagaaaataaaatcag 177 ||||||||||||||||||||| Sbjct: 63869 aaagaaagaaaataaaatcag 63889
>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the CST5 gene for cystatin D, the CST2 gene for cystatin SA, the CST1 gene for cystatin SN and the CSTP2 gene for cystatin pseudogene 2, complete sequence Length = 203076 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 73758 tcactatcatcatcaccagca 73778
>emb|AL356986.11| Human DNA sequence from clone RP11-395N6 on chromosome 1 Contains the 5' end of a known gene (FLJ10276), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel pseudogene, the 5' end of the ZBTB8 gene for zinc finger and BTB domain containing 8 and five CpG islands, complete sequence Length = 98390 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcaccag 408 ||||| ||||||||||||||||||| Sbjct: 79422 tcatcatcactatcatcatcaccag 79446
>emb|AL355582.8| Human DNA sequence from clone RP11-69L15 on chromosome 9, complete sequence Length = 115848 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 aaagaaagaaaataaaatcag 177 ||||||||||||||||||||| Sbjct: 8439 aaagaaagaaaataaaatcag 8459
>emb|AL109941.17|HSJ435K13 Human DNA sequence from clone RP3-435K13 on chromosome 6q14.1-16.1 Contains a novel pseudogene, complete sequence Length = 151301 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ataacaacaaaactattttca 152 ||||||||||||||||||||| Sbjct: 57240 ataacaacaaaactattttca 57260
>emb|AL049562.7|HSDA86H19 Human DNA sequence from clone RP6-86H19 on chromosome Xq25-26.2, complete sequence Length = 91201 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 24420 tcatcttcactatcatcatca 24440
>gb|AY150375.1| Arabidopsis thaliana putative zinc finger protein (At4g31420) mRNA, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 392 tcatcttcactatcatcatca 372
>gb|AF370269.1| Arabidopsis thaliana putative zinc finger protein (At4g31420) mRNA, complete cds Length = 1498 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tcttcctcatcttcactatca 398 ||||||||||||||||||||| Sbjct: 1469865 tcttcctcatcttcactatca 1469885
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 24981 tcatcttcactatcatcatca 25001
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 13046 tcatcttcactatcatcatca 13066
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 86864 tcatcttcactatcatcatca 86884
>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG island, complete sequence Length = 208028 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 actatcatcatcaccagcaac 412 ||||||||||||||||||||| Sbjct: 163461 actatcatcatcaccagcaac 163481
>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8, complete sequence Length = 249728 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatcag 177 ||||||||||||||||||||| Sbjct: 58936 aaagaaagaaaataaaatcag 58916
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 92739 tcactatcatcatcaccagca 92719
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 17129174 tcactatcatcatcaccagca 17129194
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 cctcatcttcactatcatcat 402 ||||||||||||||||||||| Sbjct: 319285 cctcatcttcactatcatcat 319265
>gb|AC060771.8| Homo sapiens chromosome 17, clone RP11-169I9, complete sequence Length = 138969 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcaccagcaac 412 ||||| |||||||||||||||||| |||| Sbjct: 22301 tcatcatcactatcatcatcaccatcaac 22273 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 22398 tcatcatcactatcatcatcacca 22375
>gb|AF004386.1|AF004386 Helobdella robusta homeodomain protein LOX6 (Lox6) mRNA, partial cds Length = 1205 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 131 tcatcttcactatcatcatca 151
>emb|BX827490.1|CNS0A3OV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1371 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 501 tcatcttcactatcatcatca 481
>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence Length = 197136 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcaccagcaac 412 ||||||||| |||||||||||||| |||| Sbjct: 77268 tcatcttcattatcatcatcaccatcaac 77296
>gb|AF309663.1|AF309663 Human respiratory syncytial virus isolate Moz/170/99 G-protein (G) gene, partial cds Length = 330 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 aaaactggaaagaaaaacacc 82 ||||||||||||||||||||| Sbjct: 4 aaaactggaaagaaaaacacc 24
>gb|AC016678.4|AC016678 Homo sapiens BAC clone RP11-55O11 from Y, complete sequence Length = 142982 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tcactatcatcatcaccagca 410 ||||||||||||||||||||| Sbjct: 141145 tcactatcatcatcaccagca 141125
>emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chromosome X, complete sequence Length = 190219 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cactccaaagaaagaaaataa 171 ||||||||||||||||||||| Sbjct: 24876 cactccaaagaaagaaaataa 24896
>dbj|AB094512.1| Pinctada fucata aspein mRNA for shell matrix protein, complete cds Length = 1909 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tcttcactatcatcatcacca 407 ||||||||||||||||||||| Sbjct: 451 tcttcactatcatcatcacca 431
>gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complete sequence Length = 182176 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 375 gtatcttcctcatcttcactatcatcatcacca 407 |||||||| ||||| ||||| |||||||||||| Sbjct: 88461 gtatcttcatcatcatcactgtcatcatcacca 88429
>gb|AC132952.3| Mus musculus BAC clone RP24-175H8 from 19, complete sequence Length = 177345 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 tttcactccaaagaaagaaaa 168 ||||||||||||||||||||| Sbjct: 50264 tttcactccaaagaaagaaaa 50244
>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence Length = 179585 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatca 404 ||||||||||||||||||||| Sbjct: 101572 tcatcttcactatcatcatca 101552
>emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chromosome 2, complete sequence Length = 206309 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gtacaaagaacaccagcaaaa 65 ||||||||||||||||||||| Sbjct: 83540 gtacaaagaacaccagcaaaa 83520
>emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chromosome 4, complete sequence Length = 176496 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 agaaagaaaataaaatcaggt 179 ||||||||||||||||||||| Sbjct: 156924 agaaagaaaataaaatcaggt 156904
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aagaaagaaaataaaatcagg 178 ||||||||||||||||||||| Sbjct: 121024 aagaaagaaaataaaatcagg 121044
>ref|NM_001035797.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.3 mRNA, complete cds Length = 1369 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 1047 cactatcatcatcaccagca 1066
>ref|NM_202719.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.2 mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 1080 cactatcatcatcaccagca 1099
>ref|NM_115516.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.1 mRNA, complete cds Length = 1527 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 1206 cactatcatcatcaccagca 1225
>ref|XM_642188.1| Dictyostelium discoideum hypothetical protein (DDB0189517), partial mRNA Length = 1935 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 tcttcctcatcttcactatcatca 401 |||||||| ||||||||||||||| Sbjct: 452 tcttcctcttcttcactatcatca 429
>ref|XM_641492.1| Dictyostelium discoideum hypothetical protein (DDB0190846), partial mRNA Length = 2703 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 atcttcctcatcttcactatcatcatca 404 |||||||||||||||| |||||||||| Sbjct: 972 atcttcctcatcttcatcatcatcatca 945
>gb|DQ141112.1| Tribolium castaneum Dscam gene, partial sequence Length = 33843 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gcaaaactggaaagaaaaac 79 |||||||||||||||||||| Sbjct: 26892 gcaaaactggaaagaaaaac 26873
>gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, complete sequence Length = 162139 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 94823 tcatcatcactatcatcatcacca 94846
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tcctcatcttcactatcatc 400 |||||||||||||||||||| Sbjct: 735506 tcctcatcttcactatcatc 735525
>ref|XM_458127.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C11198g) partial mRNA Length = 1293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tcttcctcatcttcactatc 397 |||||||||||||||||||| Sbjct: 1127 tcttcctcatcttcactatc 1108
>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence Length = 162333 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 58483 aaagaaagaaaataaaatca 58464
>ref|XM_707732.1| Candida albicans SC5314 hypothetical protein (CaO19.14156), mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ttcactatcatcatcaccagcaac 412 |||| ||||||||||||||||||| Sbjct: 422 ttcaatatcatcatcaccagcaac 445
>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence Length = 185754 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 cttatcttccctctcactcacagc 481 ||||||||||||||||||| |||| Sbjct: 162436 cttatcttccctctcactcccagc 162413
>ref|NM_001040319.1| Danio rerio zgc:136242 (zgc:136242), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||| ||||||||||||| Sbjct: 783 tcatcttcaccatcatcatcacca 806
>gb|AY590469.1| Homo sapiens MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (MCM3AP) gene, complete cds Length = 54127 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ttcaaagagcttttaaatag 263 |||||||||||||||||||| Sbjct: 46620 ttcaaagagcttttaaatag 46601
>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence Length = 174823 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 actttcctttgtgtttttca 524 |||||||||||||||||||| Sbjct: 71253 actttcctttgtgtttttca 71272
>gb|AY277971.1| Takifugu rubripes transcription factor Sox6a (Sox6a) gene, complete cds Length = 66784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ttcaaagagcttttaaatag 263 |||||||||||||||||||| Sbjct: 40887 ttcaaagagcttttaaatag 40868
>ref|XM_987979.1| PREDICTED: Mus musculus similar to IgE-binding protein (LOC667054), mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 catcttcactatcatcatca 404 |||||||||||||||||||| Sbjct: 568 catcttcactatcatcatca 549
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ttcactccaaagaaagaaaa 168 |||||||||||||||||||| Sbjct: 4 ttcactccaaagaaagaaaa 23
>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 91148 aaagaaagaaaataaaatca 91167
>emb|Z83235.1|CEK10C3 Caenorhabditis elegans Cosmid K10C3, complete sequence Length = 33782 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 catcttcactatcatcatca 404 |||||||||||||||||||| Sbjct: 19088 catcttcactatcatcatca 19107
>ref|XM_566689.1| Cryptococcus neoformans var. neoformans JEC21 heat shock protein (CNA02830) partial mRNA Length = 2857 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tcctcatcttcactatcatc 400 |||||||||||||||||||| Sbjct: 2704 tcctcatcttcactatcatc 2685
>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete sequence Length = 177414 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cagcaaaactggaaagaaaa 77 |||||||||||||||||||| Sbjct: 65640 cagcaaaactggaaagaaaa 65659
>gb|AC013391.12| Homo sapiens chromosome 15, clone RP11-429B14, complete sequence Length = 210797 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 ctaccaactttcctttgtgttttt 522 ||||||||||||||| |||||||| Sbjct: 123076 ctaccaactttccttggtgttttt 123053
>ref|XM_648789.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (69.t00025) partial mRNA Length = 1599 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||||||| |||||||||||||| Sbjct: 1487 tcatcttcagtatcatcatcacca 1464
>ref|XM_546979.2| PREDICTED: Canis familiaris similar to PDGFA associated protein 1 (LOC489861), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 atcttcctcatcttcactatcatc 400 |||||||||||||||||| ||||| Sbjct: 263 atcttcctcatcttcactctcatc 240
>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence Length = 194086 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||||||||||| ||||| Sbjct: 118006 tcatcttcactatcatcaccacca 117983
>gb|BC115047.1| Danio rerio cDNA clone MGC:136242 IMAGE:7256416, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||| ||||||||||||| Sbjct: 783 tcatcttcaccatcatcatcacca 806
>emb|AL583854.7| Human DNA sequence from clone RP11-570K4 on chromosome 6 Contains part of a novel gene, complete sequence Length = 135953 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||||||||| |||||||||||| Sbjct: 26240 tcatcttcactgtcatcatcacca 26217
>emb|AL357147.12| Human DNA sequence from clone RP1-29M21 on chromosome 10, complete sequence Length = 34758 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 2157 aaagaaagaaaataaaatca 2176
>emb|AL356220.12| Human DNA sequence from clone RP11-97H1 on chromosome 10 Contains part of the HPSE2 gene for heparanase 2, complete sequence Length = 139852 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 11139 aaagaaagaaaataaaatca 11120
>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains the 3' end of the OPHN1 gene for oligophrenin 1, complete sequence Length = 190611 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 122678 aaagaaagaaaataaaatca 122659
>emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chromosome 22q11.21-12.2 Contains a ca repeat polymorphism, an STS and GSSs, complete sequence Length = 80485 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 23992 tcatcatcactatcatcatcacca 23969 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 23965 tcatcatcactatcatcatcacca 23942
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1, complete sequence Length = 114771 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 atcttcctcatcttcactatcatcatca 404 ||||||| |||| ||||||||||||||| Sbjct: 40172 atcttccccatcatcactatcatcatca 40145
>gb|AY096613.1| Arabidopsis thaliana unknown protein (At3g56580) mRNA, complete cds Length = 994 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 865 cactatcatcatcaccagca 884
>gb|AY045983.1| Arabidopsis thaliana unknown protein (At3g56580) mRNA, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 1175 cactatcatcatcaccagca 1194
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tcttcctcatcttcactatc 397 |||||||||||||||||||| Sbjct: 923931 tcttcctcatcttcactatc 923950
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 74221 cactatcatcatcaccagca 74240
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 tcctcatcttcactatcatcatca 404 |||||||||||| ||||||||||| Sbjct: 43176 tcctcatcttcattatcatcatca 43199
>gb|AY138875.1| Crocodylus intermedius clone STAF3A.4 mitochondrial control region, partial sequence Length = 614 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttcctttgtgtttttcaat 526 |||||||||||||||||||| Sbjct: 146 tttcctttgtgtttttcaat 127
>emb|CR861262.1| Pongo pygmaeus mRNA; cDNA DKFZp459O163 (from clone DKFZp459O163) Length = 4242 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaaagaaaaacacctgttga 88 |||||||||||||||||||| Sbjct: 3849 gaaagaaaaacacctgttga 3868
>gb|AC126754.2| Homo sapiens chromosome 19 clone P1-103340, complete sequence Length = 26947 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||||||| |||||||||||||| Sbjct: 26551 tcatcttcattatcatcatcacca 26528
>gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104564 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tccaaagaaagaaaataaaa 173 |||||||||||||||||||| Sbjct: 49227 tccaaagaaagaaaataaaa 49208
>emb|AL833644.1|HSM804957 Homo sapiens mRNA; cDNA DKFZp686P0879 (from clone DKFZp686P0879) Length = 1969 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 ctaccaactttcctttgtgttttt 522 ||||||||||||||| |||||||| Sbjct: 1126 ctaccaactttccttggtgttttt 1149
>emb|AL832480.1|HSM803788 Homo sapiens mRNA; cDNA DKFZp686H0819 (from clone DKFZp686H0819) Length = 2128 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 agcaaaactggaaagaaaaa 78 |||||||||||||||||||| Sbjct: 1522 agcaaaactggaaagaaaaa 1503
>dbj|AK123554.1| Homo sapiens cDNA FLJ41560 fis, clone CTONG1000088 Length = 3727 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 agcaaaactggaaagaaaaa 78 |||||||||||||||||||| Sbjct: 2268 agcaaaactggaaagaaaaa 2249
>emb|CR597075.1| full-length cDNA clone CS0DF037YI18 of Fetal brain of Homo sapiens (human) Length = 1722 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaaagaaaaacacctgttga 88 |||||||||||||||||||| Sbjct: 1350 gaaagaaaaacacctgttga 1369
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 atcttccctctcactcacag 480 |||||||||||||||||||| Sbjct: 190402 atcttccctctcactcacag 190383
>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tatcttccctctcactcaca 479 |||||||||||||||||||| Sbjct: 124903 tatcttccctctcactcaca 124922
>gb|AC091551.14| Homo sapiens chromosome 18, clone RP11-729G3, complete sequence Length = 156211 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cttcctcatcttcactatca 398 |||||||||||||||||||| Sbjct: 105685 cttcctcatcttcactatca 105704
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 agcaaaactggaaagaaaaa 78 |||||||||||||||||||| Sbjct: 149850 agcaaaactggaaagaaaaa 149869
>dbj|AK139060.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730010G10 product:dachshund 1 (Drosophila), full insert sequence Length = 4396 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 4353 aaagaaagaaaataaaatca 4334
>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds Length = 171266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tatcttccctctcactcaca 479 |||||||||||||||||||| Sbjct: 128772 tatcttccctctcactcaca 128791
>gb|AC007497.6| Homo sapiens chromosome 16 clone RP11-36I17, complete sequence Length = 164269 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aaagaaaataaaatcaggtg 180 |||||||||||||||||||| Sbjct: 65319 aaagaaaataaaatcaggtg 65338
>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4, complete sequence Length = 204653 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||||||||||| ||||| Sbjct: 80660 tcatcttcactatcatcaccacca 80683
>gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaaagaaaaacacctgttga 88 |||||||||||||||||||| Sbjct: 54446 gaaagaaaaacacctgttga 54427
>gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, complete sequence Length = 153873 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaaagaaaaacacctgttga 88 |||||||||||||||||||| Sbjct: 70035 gaaagaaaaacacctgttga 70016
>gb|AC090539.6| Homo sapiens chromosome 8, clone RP11-759A9, complete sequence Length = 171690 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 atcttccctctcactcacag 480 |||||||||||||||||||| Sbjct: 168484 atcttccctctcactcacag 168503
>gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, complete sequence Length = 157000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 actttcctttgtgtttttca 524 |||||||||||||||||||| Sbjct: 51098 actttcctttgtgtttttca 51079
>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence Length = 231739 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 184621 tcatcatcactatcatcatcacca 184598
>ref|NM_075901.1| Caenorhabditis elegans ZK380.2 (ZK380.2) mRNA, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 atcttcactatcatcatcac 405 |||||||||||||||||||| Sbjct: 501 atcttcactatcatcatcac 482
>ref|NM_060209.1| Caenorhabditis elegans K10C3.4 (K10C3.4) mRNA, complete cds Length = 1113 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 catcttcactatcatcatca 404 |||||||||||||||||||| Sbjct: 940 catcttcactatcatcatca 959
>gb|DQ059114.1| Arabidopsis thaliana RING finger family protein (At3g56575) mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactatcatcatcaccagca 410 |||||||||||||||||||| Sbjct: 865 cactatcatcatcaccagca 884
>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180995 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 127545 tcatcatcactatcatcatcacca 127568
>gb|AC140847.4| Homo sapiens 12 BAC RP11-313F23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 134878 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 11354 tcatcatcactatcatcatcacca 11331
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 agcaaaactggaaagaaaaa 78 |||||||||||||||||||| Sbjct: 104170 agcaaaactggaaagaaaaa 104151
>gb|AC092850.13| Homo sapiens 12 BAC RP11-346B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176733 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 122014 tcatcatcactatcatcatcacca 122037
>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete sequence Length = 181773 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 caatagcttatcttccctct 471 |||||||||||||||||||| Sbjct: 51585 caatagcttatcttccctct 51604
>gb|AC079676.4|AC079676 Arabidopsis thaliana chromosome 1 BAC F6D5 genomic sequence, complete sequence Length = 29508 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ttataacaacaaaactattt 149 |||||||||||||||||||| Sbjct: 14695 ttataacaacaaaactattt 14714
>gb|AC068999.15|AC068999 Homo sapiens chromosome 18 clone RP11-70G19, complete sequence Length = 194813 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 98414 aaagaaagaaaataaaatca 98395
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 agcaaaactggaaagaaaaa 78 |||||||||||||||||||| Sbjct: 186484 agcaaaactggaaagaaaaa 186503
>gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, complete sequence Length = 96337 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 ctaccaactttcctttgtgttttt 522 ||||||||||||||| |||||||| Sbjct: 53338 ctaccaactttccttggtgttttt 53315
>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence Length = 156244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaaagaaaaacacctgttga 88 |||||||||||||||||||| Sbjct: 3967 gaaagaaaaacacctgttga 3986
>gb|AF263283.1|AF263283 Filobasidiella neoformans var. neoformans clone CRYP02, complete sequence Length = 93593 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tcctcatcttcactatcatc 400 |||||||||||||||||||| Sbjct: 82018 tcctcatcttcactatcatc 82037
>gb|AC068564.1|AC068564 Filobasidiella neoformans, complete sequence Length = 93979 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tcctcatcttcactatcatc 400 |||||||||||||||||||| Sbjct: 82189 tcctcatcttcactatcatc 82208
>dbj|AB073701.1| Borrelia duttonii plasmid DNA, complete sequence, strain:Ly Length = 44010 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 11590 tcatcatcactatcatcatcacca 11613 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 6880 tcatcatcactatcatcatcacca 6903 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 1540 tcatcatcactatcatcatcacca 1563
>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete sequences Length = 224098 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ttcaaagagcttttaaatag 263 |||||||||||||||||||| Sbjct: 95234 ttcaaagagcttttaaatag 95253
>emb|BX908393.10| Zebrafish DNA sequence from clone CH211-180H19 in linkage group 18, complete sequence Length = 138757 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 tcaatcaaagtaaagcccagcact 208 |||| ||||||||||||||||||| Sbjct: 604 tcaaacaaagtaaagcccagcact 627
>emb|BX649347.3| Zebrafish DNA sequence from clone DKEY-14K9 in linkage group 4, complete sequence Length = 110100 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||| ||||||||||||| Sbjct: 42612 tcatcttcaccatcatcatcacca 42589
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 catcttcactatcatcatca 404 |||||||||||||||||||| Sbjct: 34096 catcttcactatcatcatca 34115
>gb|AF126285.1|AF126285 Pleurotus ostreatus linear mitochondrial plasmid mlp1, complete sequence Length = 9879 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atcttcactatcatcatcac 405 |||||||||||||||||||| Sbjct: 9478 atcttcactatcatcatcac 9497
>gb|AF089085.1|AF089085 Arabidopsis thaliana putative auxin efflux carrier protein (PIN1) gene, complete cds Length = 2803 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ttataacaacaaaactattt 149 |||||||||||||||||||| Sbjct: 2365 ttataacaacaaaactattt 2346
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ttcaaagagcttttaaatag 263 |||||||||||||||||||| Sbjct: 258379 ttcaaagagcttttaaatag 258398
>dbj|AP006220.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-791E5, complete sequence Length = 118000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 57207 aaagaaagaaaataaaatca 57188
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ttctttcactaccaactttccttt 514 |||||||||||||||| ||||||| Sbjct: 71835 ttctttcactaccaaccttccttt 71858
>ref|NM_001030141.1| Danio rerio si:dkey-14k9.2 (si:dkey-14k9.2), mRNA Length = 776 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcatcttcactatcatcatcacca 407 |||||||||| ||||||||||||| Sbjct: 674 tcatcttcaccatcatcatcacca 697
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ctctaggtgcttctttcactacca 504 ||||||||||| |||||||||||| Sbjct: 92597 ctctaggtgctgctttcactacca 92620
>gb|AC135083.4| Mus musculus BAC clone RP24-238A21 from 14, complete sequence Length = 179469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cagcaaaactggaaagaaaa 77 |||||||||||||||||||| Sbjct: 144031 cagcaaaactggaaagaaaa 144012
>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttcactccaaagaaagaaaa 168 |||||||||||||||||||| Sbjct: 15104 ttcactccaaagaaagaaaa 15085
>gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, complete sequence Length = 221015 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cagcaaaactggaaagaaaa 77 |||||||||||||||||||| Sbjct: 114272 cagcaaaactggaaagaaaa 114253
>emb|CR956648.9| Pig DNA sequence from clone CH242-155F23 on chromosome 17, complete sequence Length = 168798 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 113240 tcatcatcactatcatcatcacca 113217 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 113147 tcatcatcactatcatcatcacca 113124 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 113051 tcatcatcactatcatcatcacca 113028 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 112958 tcatcatcactatcatcatcacca 112935
>emb|AL935318.6| Zebrafish DNA sequence from clone CH211-251L7 in linkage group 18, complete sequence Length = 176719 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 tcaatcaaagtaaagcccagcact 208 |||| ||||||||||||||||||| Sbjct: 117722 tcaaacaaagtaaagcccagcact 117699
>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete sequence Length = 181545 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cttgtttataacaacaaaac 144 |||||||||||||||||||| Sbjct: 20613 cttgtttataacaacaaaac 20594
>emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on chromosome 22q11.21-12.2 Contains CA repeat and STS, complete sequence Length = 80485 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 23992 tcatcatcactatcatcatcacca 23969 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcatcttcactatcatcatcacca 407 ||||| |||||||||||||||||| Sbjct: 23965 tcatcatcactatcatcatcacca 23942
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 agaaagaaaataaaatcagg 178 |||||||||||||||||||| Sbjct: 42742 agaaagaaaataaaatcagg 42723
>emb|AL805933.7| Mouse DNA sequence from clone RP23-31P9 on chromosome X, complete sequence Length = 209410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ctccaaagaaagaaaataaa 172 |||||||||||||||||||| Sbjct: 8118 ctccaaagaaagaaaataaa 8137
>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence Length = 193324 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 376 tatcttcctcatcttcactatcatcatcacca 407 ||||||||||||| |||| || |||||||||| Sbjct: 96113 tatcttcctcatcatcaccattatcatcacca 96144
>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence Length = 169005 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 aaagaaagaaaataaaatca 176 |||||||||||||||||||| Sbjct: 147936 aaagaaagaaaataaaatca 147917
>dbj|AP001469.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B178H12, telomere region, complete sequence Length = 47859 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ttcaaagagcttttaaatag 263 |||||||||||||||||||| Sbjct: 19329 ttcaaagagcttttaaatag 19348
>dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds Length = 160820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cttcctcatcttcactatca 398 |||||||||||||||||||| Sbjct: 146928 cttcctcatcttcactatca 146947 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,220,085 Number of Sequences: 3902068 Number of extensions: 9220085 Number of successful extensions: 189284 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 188390 Number of HSP's gapped (non-prelim): 893 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
