ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41n15 |
|---|---|
| Clone Library Name | barley_pub |
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 169 bits (428), Expect = 4e-42 Identities = 86/90 (95%), Positives = 87/90 (96%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQAIQKMLKVMPPQVVQQM 307 ARGSG K+KDVMEMLEEYKRLAKMWSK NVSKLIP NGKMSAQAIQKMLKVMPPQVVQQM Sbjct: 404 ARGSGRKVKDVMEMLEEYKRLAKMWSKRNVSKLIPQNGKMSAQAIQKMLKVMPPQVVQQM 463 Query: 306 GGKSGLEALLKQLGGGKDTSKMLAGMRGGA 217 GGKSGLEALLKQLGGGKDTSKMLAGMRGGA Sbjct: 464 GGKSGLEALLKQLGGGKDTSKMLAGMRGGA 493
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 104 bits (260), Expect = 1e-22 Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 4/90 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG +++DV +MLEEYKRLAKMWSK+ K+ P NGKMS + IQ+M K +PPQV Sbjct: 405 ARGSGRQIRDVTDMLEEYKRLAKMWSKMKGLKM-PKNGKMSDLSQNLNIQQMTKALPPQV 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAGM 229 ++QMGG GL+AL+KQ+ GGKD SKML GM Sbjct: 464 LKQMGGMGGLQALMKQM-GGKDMSKMLGGM 492
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 104 bits (260), Expect = 1e-22 Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 4/90 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG +++DV +MLEEYKRLAKMWSK+ K+ P NGKMS + IQ+M K +PPQV Sbjct: 405 ARGSGRQIRDVTDMLEEYKRLAKMWSKMKGLKM-PKNGKMSDLSQNLNIQQMTKALPPQV 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAGM 229 ++QMGG GL+AL+KQ+ GGKD SKML GM Sbjct: 464 LKQMGGMGGLQALMKQM-GGKDMSKMLGGM 492
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 96.7 bits (239), Expect = 3e-20 Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 4/89 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG ++++VMEMLEEYKRLAK+WSK+ K IP NG MSA + Q M KV+PPQ+ Sbjct: 405 ARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNAQHMSKVLPPQM 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAG 232 ++Q+GG GL++L+KQ+G GKD M G Sbjct: 464 LKQIGGMGGLQSLMKQMGSGKDMMGMFGG 492
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 4/93 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG ++ +VM+M+EEYKRLAK+WSK+ K IP G+MSA + Q M KV+PPQ+ Sbjct: 405 ARGSGRQVHEVMDMMEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPPQM 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAGMRGG 220 ++Q+GG GL+ L+KQ+G KD + GM GG Sbjct: 464 LKQIGGMGGLQNLMKQMGSAKDMMGGMGGMFGG 496
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 84.3 bits (207), Expect = 2e-16 Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 4/92 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG + +VMEMLEEYKRLAK++SK+ K IP G MS+ + Q M KV+PPQ+ Sbjct: 405 ARGSGRLVHEVMEMLEEYKRLAKIFSKMKGLK-IPKKGDMSSLSRNMNAQNMSKVLPPQM 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 ++Q+GG GL+ L+KQ+G KD M G G Sbjct: 464 LKQIGGMGGLQNLMKQMGSAKDMMGMFGGGGG 495
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 82.4 bits (202), Expect = 6e-16 Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 4/93 (4%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKMLKVMPPQV 319 ARGSG +++VMEMLEEYKRL MW K+ K + G MSA + Q++ KV+P Q+ Sbjct: 405 ARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLE-KGNMSALSKNKNSQQLSKVLPAQM 463 Query: 318 VQQMGGKSGLEALLKQLGGGKDTSKMLAGMRGG 220 ++Q+GG SGL++L+KQ+G GKD L GM GG Sbjct: 464 LKQIGGMSGLQSLMKQMGSGKD----LMGMFGG 492
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 79.3 bits (194), Expect = 5e-15 Identities = 43/85 (50%), Positives = 56/85 (65%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQAIQKMLKVMPPQVVQQM 307 ARGSG +++VMEMLEEYKR+AK + IP NG MS KV+PPQ+++QM Sbjct: 404 ARGSGRLVREVMEMLEEYKRIAKTMKGIK----IPKNGDMS--------KVIPPQMLKQM 451 Query: 306 GGKSGLEALLKQLGGGKDTSKMLAG 232 GG SGL++L+KQ+G KD M G Sbjct: 452 GGMSGLQSLMKQMGSAKDMMGMFGG 476
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +DV E+L +Y + A+M K+ K + G MS A+ Q+M K+M Sbjct: 407 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 466 Query: 330 PPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAGMRG 223 P+V+ MGG +GL+++++Q G + + GM G Sbjct: 467 DPRVLHHMGGMAGLQSMMRQFQQG--AAGNMKGMMG 500
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 52.4 bits (124), Expect = 7e-07 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 8/84 (9%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMS--------AQAIQKMLKVM 331 ARGSG +++V E+L++Y + K+ K + G + A+ Q+M K+M Sbjct: 406 ARGSGTSVREVNELLKQYSNFSATVKKMGGIKGLFKGGDLGKNVNPSQMAKLNQQMAKMM 465 Query: 330 PPQVVQQMGGKSGLEALLKQLGGG 259 P+V+QQMGG SGL+ +++Q G Sbjct: 466 DPRVLQQMGGMSGLQNMMRQFQQG 489
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 36.2 bits (82), Expect = 0.048 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKL 388 ARGSG KDV E+L++Y+++ K++ +N +L Sbjct: 402 ARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQL 434
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 35.4 bits (80), Expect = 0.082 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLI 385 ARGSG +KDV E+L +Y ++ K + +N +L+ Sbjct: 402 ARGSGTSVKDVKELLNQYNQMKKFFKSMNKRQLL 435
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 34.7 bits (78), Expect = 0.14 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -3 Query: 486 ARGSGXKLKDVMEMLEEYKRLAKMWSKLNVSKL 388 ARGSG +KDV E+L +Y ++ K + +N +L Sbjct: 402 ARGSGTSIKDVKELLTQYNQMKKFFKSMNKRQL 434
>CARKL_MOUSE (Q9D5J6) Carbohydrate kinase-like protein (EC 2.7.1.-)| Length = 476 Score = 32.7 bits (73), Expect = 0.53 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 4/120 (3%) Frame = -2 Query: 463 QGRDGDAGRV-QATSQDVEQAECVEIDTAEWKDECSGHPEDAQSHAATSGAADGGQKWLG 287 QGR+ D R+ QA + EC++ + G Q H A G +W+ Sbjct: 54 QGREQDVTRIIQALN------ECLDALPRQQLQRVRGIGVSGQMHGILFWKAGQGCEWME 107 Query: 286 GSPETIGRRQGHEQNACWHEGWCXXXXXXXXXXXXXRISLLTRRYCSICF---PNSPLYL 116 G P + + W +G C +S+ T C+ F NSP +L Sbjct: 108 GGPAFVFEPRAVSHLVTWQDGRCNSSFLASLPKPDSHLSVATGFGCATIFWLLKNSPEFL 167
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 32.3 bits (72), Expect = 0.70 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = -3 Query: 306 GGKSGLEALLKQLGGGKDTSKMLAGMRGGA*SCKCRWCACC 184 G G + GG K G +GG SC C C+CC Sbjct: 51 GSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCC 91
>EFP_MANSM (Q65V95) Elongation factor P (EF-P)| Length = 192 Score = 32.0 bits (71), Expect = 0.91 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = -2 Query: 487 RSRVRQXTQGRDGDAGRVQATSQDVEQAECVEID-TAEWKDECSG---HPEDAQSHAATS 320 R+R+R+ G+ D TS VE A+ ++++ +KDE HPE + ++A S Sbjct: 44 RTRIRKLISGKVLDVNFKSGTS--VEAADVMDLNLNYSYKDEDFWYFMHPETFEQYSADS 101 Query: 319 GAADGGQKWLGGSPETI 269 A +KWL E I Sbjct: 102 KAVGDAEKWLLDQAECI 118
>EFP_HAEIN (P43771) Elongation factor P (EF-P)| Length = 187 Score = 32.0 bits (71), Expect = 0.91 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = -2 Query: 487 RSRVRQXTQGRDGDAGRVQATSQDVEQAECVEID-TAEWKDECSG---HPEDAQSHAATS 320 R+R+R+ G+ D TS VE A+ ++++ T +KD+ HPE + ++A + Sbjct: 39 RTRIRKLISGKVLDVNFKSGTS--VEAADVMDLNLTYSYKDDAFWYFMHPETFEQYSADA 96 Query: 319 GAADGGQKWL 290 A +KWL Sbjct: 97 KAVGDAEKWL 106
>EFP_PASMU (P57811) Elongation factor P (EF-P)| Length = 188 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = -2 Query: 487 RSRVRQXTQGRDGDAGRVQATSQDVEQAECVEID-TAEWKDECSG---HPEDAQSHAATS 320 R+R+R+ G+ D TS VE A+ ++++ T +KD+ HPE + ++A + Sbjct: 40 RTRIRKLISGKVLDVNFKSGTS--VEAADVMDLNLTYSYKDDAFWYFMHPETFEQYSADA 97 Query: 319 GAADGGQKWL 290 A +KWL Sbjct: 98 KAIGDAEKWL 107
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 Query: 267 GGGKDTSKMLAGMRGGA*SCKCRWCACC 184 GG K G +GG SC C C+CC Sbjct: 175 GGSKGGCGSCGGSKGGCGSCGCSQCSCC 202
>SPR2B_MOUSE (O70554) Small proline-rich protein 2B| Length = 98 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +2 Query: 221 PPLMPASILLVSLPPPNCFRRASKPLLPPICCTTC 325 PP+ P PPP C +P PP+CC C Sbjct: 15 PPVCPPPKCPEPCPPPKC----PEPCPPPVCCEPC 45 Score = 29.3 bits (64), Expect = 5.9 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = +2 Query: 221 PPLMPASILLVSLPPPNCFRRASKPLLPPICCTTC 325 P P + PPP C +P PP+CC C Sbjct: 33 PEPCPPPVCCEPCPPPKC----PEPCPPPVCCEPC 63
>MUTS_AQUAE (O66652) DNA mismatch repair protein mutS| Length = 859 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/72 (23%), Positives = 40/72 (55%) Frame = -3 Query: 480 GSGXKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQAIQKMLKVMPPQVVQQMGG 301 G+ K+++++++L SKLN+ +++ G+ + ++K+LKV ++ ++ Sbjct: 150 GAKVKIEELLDLL----------SKLNIKEILVKKGEKLPEELEKVLKVYVSELEEEF-F 198 Query: 300 KSGLEALLKQLG 265 + G E +LK G Sbjct: 199 EEGSEEILKDFG 210
>CLCN6_MOUSE (O35454) Chloride channel protein 6 (ClC-6)| Length = 870 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 240 LAGMRGGA*SCKCRWCACC 184 +AG RG C CRWC CC Sbjct: 1 MAGCRGSV-CCCCRWCCCC 18
>RGS20_MOUSE (Q9QZB1) Regulator of G-protein signaling 20 (RGS20) (Regulator of| G-protein signaling Z1) Length = 239 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = -3 Query: 303 GKSGLEALLKQLGGGKDTSKMLAGMRGGA*SCKC--RWCACCVVEFLS 166 G E ++Q+ GG +T +GG S C WC CC L+ Sbjct: 26 GSERTEMRMRQMCGGSETQGPAPSQQGGRGSNACCFCWCCCCTCSCLT 73
>CLCN6_RABIT (Q9TT16) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 30.0 bits (66), Expect = 3.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 240 LAGMRGGA*SCKCRWCACC 184 +AG RG C CRWC CC Sbjct: 1 MAGCRGSL-CCCCRWCCCC 18
>CLCN6_HUMAN (P51797) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 30.0 bits (66), Expect = 3.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 240 LAGMRGGA*SCKCRWCACC 184 +AG RG C CRWC CC Sbjct: 1 MAGCRGSL-CCCCRWCCCC 18
>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated| protein 5.10) (Ultrahigh sulfur keratin-associated protein 5.10) Length = 202 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 267 GGGKDTSKMLAGMRGGA*SCKCRWCACC 184 GG K G +GG SC C C CC Sbjct: 118 GGSKGGCGSCGGSKGGCGSCGCSQCNCC 145
>LSP1_HUMAN (P33241) Lymphocyte-specific protein 1 (Protein pp52) (52 kDa| phosphoprotein) (Lymphocyte-specific antigen WP34) (47 kDa actin-binding protein) Length = 339 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 415 VEQAECVEIDTAEWKDECSGHPEDAQSHAATSGAADGGQKWLGGSPE 275 ++ +E E+D E + S PE Q H GA D G+ SPE Sbjct: 67 LKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPE 113
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Frame = -2 Query: 349 EDAQSHAATSGAADG----GQKWLGGSPETIGRRQGHEQNACWH 230 +D SH G D GQK G+R+G +QN+ WH Sbjct: 445 QDQSSHQGQKGRQDQSSHQGQKGRQDQSSHQGQREGQDQNSQWH 488
>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1895 Score = 28.9 bits (63), Expect = 7.7 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = -3 Query: 438 EYKRLAKMWSKLNVSKLIPP-NGKMS-AQAIQKMLKVMPPQVVQQMGGKS-GLEALLKQL 268 EY ++W+ L L +G M+ ++AI+ + +V P++VQ GG + GLE L+++ Sbjct: 953 EYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVENPEIVQMFGGNADGLERELEKM 1012 Query: 267 GGGK 256 K Sbjct: 1013 ARRK 1016
>MIG15_CAEEL (Q23356) Serine/threonine-protein kinase mig-15 (EC 2.7.11.1)| (Abnormal cell migration protein 15) Length = 1096 Score = 28.9 bits (63), Expect = 7.7 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 155 SSCQERNSTTQQAHHLHLQD*APPLMPASILLVSLPPPNCFRRASKPLL 301 S +ER +QAHH MP + + S+P P R+ S+PLL Sbjct: 460 SEREERRERERQAHHA---------MPIARVSASVPAPQQSRKMSEPLL 499
>GLS1_YEAST (P38631) 1,3-beta-glucan synthase component GLS1 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) (CND1 protein) (CWN53 protein) (FKS1 protein) (Papulacandin B sensitivity protein 1) Length = 1876 Score = 28.9 bits (63), Expect = 7.7 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = -3 Query: 438 EYKRLAKMWSKLNVSKLIPP-NGKMS-AQAIQKMLKVMPPQVVQQMGGKS-GLEALLKQL 268 EY ++W+ L L +G M+ ++AI+ + +V P++VQ GG + GLE L+++ Sbjct: 934 EYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVENPEIVQMFGGNAEGLERELEKM 993 Query: 267 GGGK 256 K Sbjct: 994 ARRK 997 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,133,382 Number of Sequences: 219361 Number of extensions: 1503871 Number of successful extensions: 5555 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5533 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
