ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41n12 |
|---|---|
| Clone Library Name | barley_pub |
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 48.5 bits (114), Expect = 1e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = -3 Query: 493 FRPVXHXYDGPKFRLELSIAETLSLLDLCKSEDA 392 FRP+ H YDGPKFRLEL+I E +SLLD+ + A Sbjct: 174 FRPILHHYDGPKFRLELNIPEAISLLDIFEETKA 207
>ALDO1_ARATH (Q7G193) Aldehyde oxidase 1 (EC 1.2.3.1) (AtAO-1) (AtAO1)| Length = 1368 Score = 32.0 bits (71), Expect = 0.92 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = -3 Query: 469 DGPKFRLELS-IAETLSLLDLCKSEDA*SA-----SEHGCGCSVVLFSKYHP 332 +G +F LELS I + +L+D +++ + E GCG VVL SKY P Sbjct: 26 NGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYDP 77
>IRG1_MOUSE (P54987) Immune-responsive protein 1 (Fragment)| Length = 646 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 202 HLRGLLLPSTRSFLGEMQPPTNSLRFHGRRTEQNIVKTSSTTYR 333 H G LL + L +++ P +G+R N++KTS TT++ Sbjct: 589 HCFGFLLHLPSNELSKVESPETETSVYGKRLVYNLIKTSPTTFK 632
>ALDO2_ARATH (Q7G192) Aldehyde oxidase 2 (EC 1.2.3.1) (AtAO-2) (AtAO3)| Length = 1321 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = -3 Query: 469 DGPKFRLELSIAE-TLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 332 +G +F LELS + + +LL+ + + + S E GCG VVL SK+ P Sbjct: 8 NGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDP 59
>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)| Length = 1337 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = -3 Query: 469 DGPKFRLELSIAETLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 332 +G KF + LS+ + +LL+ +S S E GCG +V+ SKY P Sbjct: 11 NGEKFEV-LSVNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDP 60
>APBB3_HUMAN (O95704) Amyloid beta A4 precursor protein-binding family B member| 3 (Fe65-like protein 2) (Fe65L2) Length = 486 Score = 30.0 bits (66), Expect = 3.5 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = +1 Query: 34 PPSLWGIHDASQQYPPHLSGGFPRWRRAYCTTNT*IRRTYRSPRLRTNGTNTETGSHLRG 213 PP IHDA+ Y H+ G +W+R T+ GT TE + G Sbjct: 32 PPGWRKIHDAAGTYYWHVPSGSTQWQRP----------TWELGDAEDPGTGTE---GIWG 78 Query: 214 LLLPSTRSF--LGEMQPPTNSLRFHG 285 L P RSF L +NSL ++G Sbjct: 79 LRPPKGRSFSSLESSLDRSNSLSWYG 104
>AROC_SYNEL (Q8DLM1) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 363 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +3 Query: 42 TLGHS*CITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITDERHQHRDRLTS*RPTS 221 T GH +TT GGV + G +++ +IQ + D R + RLT+ R S Sbjct: 4 TFGHLFRVTTFGESHGGGVGVVVDGCPPRLELSEVDIQ--KELDRRRPGQSRLTTPRQES 61 Query: 222 SKYQVLSG 245 + ++LSG Sbjct: 62 DRCEILSG 69
>AROC_ANASP (Q8YYP9) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 362 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +3 Query: 42 TLGHS*CITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITDERHQHRDRLTS*RPTS 221 T GH ITT GGV + G I+ E IQ+ D R + ++T+ R + Sbjct: 4 TFGHLFRITTFGESHGGGVGVVIDGCPPLLEISPEEIQLE--LDRRRPGQSKITTPRKEA 61 Query: 222 SKYQVLSG 245 ++LSG Sbjct: 62 DTCEILSG 69
>MURD_SYNY3 (P73668) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 452 Score = 29.3 bits (64), Expect = 6.0 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 11/90 (12%) Frame = +1 Query: 181 TNTETGSHLRGLLLPSTRSFL--------GEMQPPTNSLRFHGRRTEQNIVKTSSTTYRD 336 T+T+ +HL GL P +L GE+ P N + G+ +QN++ + Sbjct: 234 TSTQGANHLAGLCDPKQGVYLQDNWVNAFGELIAPINLFKMPGQHNQQNLLMAIAAARLA 293 Query: 337 DIY*K---EPQSNHTHVPKQIRRLLTCKGL 417 I K E T VP ++ + T G+ Sbjct: 294 GIDKKAITETLLTFTGVPHRLEPICTINGV 323
>ADA2A_RAT (P22909) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (CA2-47) (Alpha-2D adrenergic receptor) Length = 450 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -2 Query: 155 LYVLLIYVFVVQYARRQRGNPPERWGGYCCDA 60 L ++L+YV + Q A+R+ PP R G C A Sbjct: 210 LIMILVYVRIYQIAKRRTRVPPSRRGPDACSA 241
>ADA2A_MOUSE (Q01338) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) Length = 450 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -2 Query: 155 LYVLLIYVFVVQYARRQRGNPPERWGGYCCDA 60 L ++L+YV + Q A+R+ PP R G C A Sbjct: 210 LIMILVYVRIYQIAKRRTRVPPSRRGPDACSA 241
>SMG1_DROME (Q70PP2) Serine/threonine-protein kinase Smg1 (EC 2.7.11.1)| Length = 3218 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 345 VNIIPVSCGRCFHNVLFCPSSMKAQAVGWWLHFPQK-GPGTWK 220 ++++PVS GRC + F S++ + + W Q PG+W+ Sbjct: 1242 LSLLPVSSGRCQNRSKFISSAILMRCLAWTQLLRQHCAPGSWE 1284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,871,597 Number of Sequences: 219361 Number of extensions: 1866661 Number of successful extensions: 4702 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4696 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
