| Clone Name | rbaal41n06 |
|---|---|
| Clone Library Name | barley_pub |
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 282 bits (721), Expect = 6e-76 Identities = 134/168 (79%), Positives = 148/168 (88%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV EAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV Sbjct: 75 FYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYV 134 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 YGYPNLKSV+ELIYKRGYGKLN QRI LT+N ++D+ LGKH IIC+EDL+HEI+TVGPH Sbjct: 135 TYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPH 194 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF KRNHYVEGGDAGNREN+IN+LVRRMN Sbjct: 195 FKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 281 bits (719), Expect = 1e-75 Identities = 134/168 (79%), Positives = 148/168 (88%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV EAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV Sbjct: 77 FYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 136 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 YGYPNLKSV+ELIYKRG+GKLN QR LT+N ++D+GLGKH IIC+EDL+HEI+TVGPH Sbjct: 137 TYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPH 196 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF KRNHYVEGGDAGNREN+IN+LVRRMN Sbjct: 197 FKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 277 bits (708), Expect = 2e-74 Identities = 132/168 (78%), Positives = 147/168 (87%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV EAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV Sbjct: 75 FYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYV 134 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 YG+PNLKSV+ELIYKRGYGKLN QRI LT+N ++++ LGKH IIC EDL+HEILTVGPH Sbjct: 135 TYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPH 194 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF KRNHYVEGGDAGNREN+IN+L+RRMN Sbjct: 195 FKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 239 bits (610), Expect = 5e-63 Identities = 115/168 (68%), Positives = 135/168 (80%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+ Sbjct: 81 FYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYI 140 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK+ IIC+EDL+HEI TVG Sbjct: 141 AWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKR 200 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 201 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 239 bits (610), Expect = 5e-63 Identities = 115/168 (68%), Positives = 135/168 (80%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+ Sbjct: 81 FYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYI 140 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK+ IIC+EDL+HEI TVG Sbjct: 141 AWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKR 200 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 201 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 238 bits (608), Expect = 8e-63 Identities = 115/168 (68%), Positives = 134/168 (79%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+ Sbjct: 103 FYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYI 162 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK IIC+EDL+HEI TVG Sbjct: 163 AWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKR 222 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 223 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 238 bits (606), Expect = 1e-62 Identities = 113/168 (67%), Positives = 134/168 (79%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NMLR VEPY+ Sbjct: 93 FYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYI 152 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N ++ LGK IIC+EDL+HEI TVG Sbjct: 153 AWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKR 212 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FKEANNFLWPF K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 213 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 225 bits (574), Expect = 7e-59 Identities = 105/169 (62%), Positives = 137/169 (81%), Gaps = 1/169 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 F++ EAKL+F++RI+GIN + PK +KILQLLRL QI NGVF++V KAT M++ VEP+V Sbjct: 80 FHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWV 139 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYPNLKSV+ELIYKRGYGK+NKQR+ LT+N +I+E LGK+ IIC+EDL+HEI TVGP+ Sbjct: 140 AYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPN 199 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRMN 108 FK+A+NFLWPF ++ H++EGGD GNRE +IN L+R+MN Sbjct: 200 FKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 223 bits (569), Expect = 3e-58 Identities = 103/167 (61%), Positives = 131/167 (78%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E K+ FVVRIRGIN +HPK +K LQ+LRLRQI NGVF+K+NKAT+ +LR +EPYV Sbjct: 77 FYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYV 136 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPN K++ +L+YKRGY K++ R+P+T+N ++++ LGK NIIC+EDL HEI TVGPH Sbjct: 137 AWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPH 196 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 FKEA NFLWPF K NH+VEGGD GNRE+ IN L+R+M Sbjct: 197 FKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 220 bits (561), Expect = 2e-57 Identities = 110/168 (65%), Positives = 131/168 (77%), Gaps = 1/168 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV EAKL FVVRIRGIN + PK +K+LQL RLRQI NGVF+K+NKATINMLR EPY+ Sbjct: 84 FYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYI 143 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGK-HNIICIEDLVHEILTVGP 255 +GYPNLKSVRELIYKRG+ K N+QR+P+T+N VI+ L + H I C+EDLVHEI TVGP Sbjct: 144 TWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGP 203 Query: 254 HFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 +FK A+NFLWPF K NHYV GGD GNRE+ IN+L+R+M Sbjct: 204 NFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 219 bits (557), Expect = 6e-57 Identities = 103/170 (60%), Positives = 131/170 (77%), Gaps = 2/170 (1%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV E KL+FV+RI+GI+ M PK +K+LQLLRL QI NGVF+++ KAT +LR VEPY+ Sbjct: 81 FYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYI 140 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+GYPNL SVR+L+YKRGYGK+NKQRIPL++N +I+E LGK+ IIC+EDL+HEI TVGP Sbjct: 141 AFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPA 200 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 108 FK+A+NFLWPF +R HY+EGG GNRE IN L++ N Sbjct: 201 FKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 212 bits (539), Expect = 8e-55 Identities = 97/170 (57%), Positives = 130/170 (76%), Gaps = 2/170 (1%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV + KL+FV+RI+GIN + PK +K+LQLLRL QI +GVF+KV KAT +LR VEPYV Sbjct: 74 YYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYV 133 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYP+ ++R+L+YKRGYGK+NKQRI L+ N +++ LGK+ II ++DL+HEI+TVGPH Sbjct: 134 AYGYPSYSTIRQLVYKRGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPH 193 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 108 FK+ANNFLWPF R H+++GG GNRE +IN+LV+ MN Sbjct: 194 FKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 211 bits (536), Expect = 2e-54 Identities = 99/168 (58%), Positives = 131/168 (77%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV AK+ FV+RIRGIN + PK +K+L+LLRL Q+ NGVF+K+NKA+INML+ VEPYV Sbjct: 78 FYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYV 137 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYG+PNLKS++ELIYKRG+ K++ QRIPLT+N ++++ LGK IIC+ED++HEI T G H Sbjct: 138 AYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKH 197 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 FK+ NN LWPF K+ +++GGDAGNRE+ IN L+ RMN Sbjct: 198 FKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 210 bits (534), Expect = 3e-54 Identities = 94/170 (55%), Positives = 132/170 (77%), Gaps = 2/170 (1%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYV Sbjct: 74 YYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYV 133 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +I+ LGK+ I+ I+DL+HEI+TVGPH Sbjct: 134 AYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPH 193 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 108 FK+ANNFLWPF R H+++GG GNRE +IN+LV+ MN Sbjct: 194 FKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 210 bits (534), Expect = 3e-54 Identities = 94/170 (55%), Positives = 132/170 (77%), Gaps = 2/170 (1%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYV Sbjct: 74 YYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYV 133 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +I+ LGK+ I+ I+DL+HEI+TVGPH Sbjct: 134 AYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPH 193 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 108 FK+ANNFLWPF R H+++GG GNRE +IN+LV+ MN Sbjct: 194 FKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 209 bits (532), Expect = 5e-54 Identities = 101/168 (60%), Positives = 131/168 (77%), Gaps = 1/168 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV E KL+FV+RIRGIN + PK +KI+QLLRL QI NGVF+K NKAT ML+ VEPYV Sbjct: 83 YYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYV 142 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 YG PNLK+VREL+YKRG+GK+NKQRI L++N +I+ LGK++I+ IEDL+HEI TVGP+ Sbjct: 143 TYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPN 202 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 111 FK+A NF+WPF ++ H++EGGDAG R+ +IN LVR+M Sbjct: 203 FKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 206 bits (524), Expect = 4e-53 Identities = 95/169 (56%), Positives = 130/169 (76%), Gaps = 1/169 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI GVF+++ KAT +L+ EPY+ Sbjct: 73 YYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYI 132 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYPNL ++R L+YKRG+GK+NKQRI L++N +I+ LGK+ I+ IEDL+HEI TVGP+ Sbjct: 133 AYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPN 192 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRMN 108 FK+ANNFLWPF ++ H+++GGD GNRE +IN LV++MN Sbjct: 193 FKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 205 bits (521), Expect = 1e-52 Identities = 99/168 (58%), Positives = 130/168 (77%), Gaps = 1/168 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 ++V E KL+FVVRIRGIN + PK +KI+QLLRL QI NG+F+K NKA ML+ VEPYV Sbjct: 82 YFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYV 141 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 YG PN K+VRELIYKRG+GK+NKQRIPL++N +I+ LGK++I+ +EDL+HEI TVGP+ Sbjct: 142 TYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPN 201 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 111 FK+A NFLWPF ++ H++EGGDAG R+ +IN LV++M Sbjct: 202 FKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 205 bits (521), Expect = 1e-52 Identities = 95/170 (55%), Positives = 129/170 (75%), Gaps = 2/170 (1%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI +G F+KV KAT +L+ +EPYV Sbjct: 75 YYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYV 134 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 AYGYP+ +VR+L+YKRG+GK+NKQRI L++N +++ LGK I+ I+DL+HEI+TVGPH Sbjct: 135 AYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPH 194 Query: 251 FKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 108 FK+ANNFLWPF R H+++GG GNRE +IN+LV+ MN Sbjct: 195 FKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 176 bits (445), Expect = 6e-44 Identities = 89/166 (53%), Positives = 115/166 (69%), Gaps = 1/166 (0%) Frame = -2 Query: 608 YVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 429 +V E KLLFV+RI G+ M PK +K+L+LLRL +I N VF++ NKA MLR VEPYV Sbjct: 82 FVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVM 141 Query: 428 YGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHF 249 YG PNL SVRELIYKRG+GK+N QRI L++N +I+E LGK+++I IED++HEI VG HF Sbjct: 142 YGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHF 201 Query: 248 KEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRR 114 KE FLWPF K+ H+ EG AG IN+L+++ Sbjct: 202 KEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 147 bits (370), Expect = 3e-35 Identities = 77/160 (48%), Positives = 102/160 (63%) Frame = -2 Query: 587 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 408 L FVVRI I+ + ++ + LRL++IF+GVF+KV + MLR VEPYV +G+PNLK Sbjct: 87 LAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLK 146 Query: 407 SVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFL 228 SVRELI KRG K+ + IPLT+N VI+E LGK +IC+EDL+HEI G HF+E + FL Sbjct: 147 SVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFL 206 Query: 227 WPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 PF + E G G R INQL+R++N Sbjct: 207 CPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 146 bits (369), Expect = 4e-35 Identities = 77/160 (48%), Positives = 102/160 (63%) Frame = -2 Query: 587 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 408 L FVVRI I+ + ++ + LRL++IF+GVF+KV + MLR VEPYV +G+PNLK Sbjct: 87 LAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLK 146 Query: 407 SVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFL 228 SVRELI KRG K+ + IPLT+N VI+E LGK +IC+EDL+HEI G HF+E + FL Sbjct: 147 SVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFL 206 Query: 227 WPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 108 PF + E G G R INQL+R++N Sbjct: 207 RPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 105 bits (262), Expect = 1e-22 Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 8/131 (6%) Frame = -2 Query: 587 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 414 LLF+VR+RG A++ K KIL LLRL + GVF+K+ K +L+ + PYV G P+ Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200 Query: 413 LKSVRELIYKRGY------GKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 L S+R LI KRG + I L +N +++E LG H IIC+ED++HEI T+G Sbjct: 201 LSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGES 260 Query: 251 FKEANNFLWPF 219 F N FL PF Sbjct: 261 FSVCNFFLQPF 271
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 101 bits (252), Expect = 2e-21 Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Frame = -2 Query: 611 FYVSXEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV 432 FYV EA+ V+ IR PK +K+L+L RL++I V ++ NK+T ML+ ++ +V Sbjct: 73 FYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHV 132 Query: 431 AYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPH 252 A+G ++ +R+L+Y +G G+ R+ LTN + D GK I CIE+LVH I Sbjct: 133 AFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEM 190 Query: 251 FKEANNFLWPFXXXXXXXXXXXKRN-HYVEGGDAGNRENYINQLVRRM 111 FK+ N+FL+PF +++ + +GG GN ++ ++ L+ RM Sbjct: 191 FKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 100 bits (250), Expect = 3e-21 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 8/134 (5%) Frame = -2 Query: 596 EAKLLFVVRIRGINAMH--PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 423 E LLFV+R++G A+ K K+L LLRL ++ GVF+K+ K +L+ V PY+ G Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIG 193 Query: 422 YPNLKSVRELIYKRGYGKLNK------QRIPLTNNKVIDEGLGKHNIICIEDLVHEILTV 261 P+L S+R LI KR + + I L +N +++E LG +ICIED++HEI T+ Sbjct: 194 QPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTL 253 Query: 260 GPHFKEANNFLWPF 219 G +F + FL PF Sbjct: 254 GENFSKCTFFLLPF 267
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 100 bits (249), Expect = 3e-21 Identities = 55/134 (41%), Positives = 87/134 (64%), Gaps = 8/134 (5%) Frame = -2 Query: 596 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 423 E +LLFV+R++G + A P K +IL LRL ++ VF+K+ + T ++L+ + PYV G Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192 Query: 422 YPNLKSVRELIYKRG---YGKLNKQ---RIPLTNNKVIDEGLGKHNIICIEDLVHEILTV 261 P+LKS+R LI KR Y + +++ I L +N +++E LG +ICI+D++HEI T+ Sbjct: 193 KPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATL 252 Query: 260 GPHFKEANNFLWPF 219 G +F + N FL PF Sbjct: 253 GENFTKCNFFLQPF 266
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 97.1 bits (240), Expect = 4e-20 Identities = 54/133 (40%), Positives = 79/133 (59%), Gaps = 8/133 (6%) Frame = -2 Query: 593 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 420 A LLFVVR+RG A + K ++L LLRL ++ GVF+++ +L+ V PYV G Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169 Query: 419 PNLKSVRELIYKRGY------GKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVG 258 P+L S+R L+ KR G+ + L +N V++E LG +IC+ED++HEI T+G Sbjct: 170 PSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMG 229 Query: 257 PHFKEANNFLWPF 219 F + N FL PF Sbjct: 230 EAFAKCNFFLLPF 242
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 95.5 bits (236), Expect = 1e-19 Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 11/136 (8%) Frame = -2 Query: 593 AKLLFVVRI----RGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAY 426 AKLLF++RI +G+ + K +K+L LLRL + GVF+K+ AT+ +L+ + PY+ Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVA 150 Query: 425 GYPNLKSVRELIYKRGY-----GKLNKQRI-PLTNNKVIDEGLGKH-NIICIEDLVHEIL 267 G P+L S+R+L KR + + RI L NN V+++ G ICIEDL+HE+ Sbjct: 151 GKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELA 210 Query: 266 TVGPHFKEANNFLWPF 219 T+G HFK +N++ PF Sbjct: 211 TLGEHFKTVSNWILPF 226
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 86.3 bits (212), Expect = 7e-17 Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 8/136 (5%) Frame = -2 Query: 602 SXEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 429 S + L +VR G + A P K +K+LQLLRL +I +GVF+K+ + +L+ + PY Sbjct: 27 SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86 Query: 428 YGYPNLKSVRELIYKRGYGKL------NKQRIPLTNNKVIDEGLGKHNIICIEDLVHEIL 267 P+L++VR+L+ KR + +++ L +N +++E LG IICIED++HE Sbjct: 87 IXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETS 146 Query: 266 TVGPHFKEANNFLWPF 219 + FK +FL PF Sbjct: 147 HLATTFKTVTHFLDPF 162
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 52.0 bits (123), Expect = 1e-06 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 2/160 (1%) Frame = -2 Query: 584 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 408 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 407 SVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFL 228 ++ +LI KR GKL + N V DE + + + IE+ +++ K+ N Sbjct: 63 TLAKLIRKR--GKL------IGNKPVTDEYVKEKLGMTIEEFAQKVINGEMSLKDLPNLK 114 Query: 227 WPFXXX-XXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 F K+ + EGG G R IN+L+ RM Sbjct: 115 PVFRLHPPRGGFKGSKKRSFQEGGALGYRGEKINELIERM 154
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 51.2 bits (121), Expect = 2e-06 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 2/160 (1%) Frame = -2 Query: 584 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 408 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 407 SVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFL 228 ++ +LI KRG NK P+T ++ + E LG + IE+ +++ K+ N Sbjct: 63 TLAKLIRKRGRLIGNK---PVT-DEYVKEKLG----MTIEEFAQKVVNGEMSLKDLPNLK 114 Query: 227 WPFXXX-XXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 F K+ + EGG G R IN+L+ RM Sbjct: 115 PVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINELIERM 154
>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P| Length = 155 Score = 50.8 bits (120), Expect = 3e-06 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%) Frame = -2 Query: 584 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 408 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 407 SVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFL 228 ++ +LI KRG NK P+T ++ + E LG + IE+ +++ K+ N Sbjct: 63 TLAKLIRKRGRLIGNK---PVT-DEYVKEKLG----MTIEEFAQKVINGEMSLKDLPNLK 114 Query: 227 WPFXXX-XXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 F K+ + EGG G R IN L+ RM Sbjct: 115 PVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINDLIERM 154
>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P| Length = 162 Score = 46.6 bits (109), Expect = 6e-05 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 4/163 (2%) Frame = -2 Query: 587 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNL 411 L V+RIRG + P K L LLRLR+ + ++ +MLR VE + YG Sbjct: 6 LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEE 65 Query: 410 KSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHF-KEANN 234 + + EL+ KRG +K PLT +K ++E LG + + +L ++++ H+ + Sbjct: 66 RVLEELLRKRGRIVGDK---PLT-DKWVEENLG---LSGLGELAEKLVSGELHYHRLEEK 118 Query: 233 FLWPFXXXX--XXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 + PF + + +GG+ G R + IN+L+ +M Sbjct: 119 GVKPFFRLHPPRGGFKKSIKRMFRDGGELGYRGSAINELILKM 161
>RL30_ARCFU (O28375) 50S ribosomal protein L30P| Length = 152 Score = 43.5 bits (101), Expect = 5e-04 Identities = 25/67 (37%), Positives = 41/67 (61%) Frame = -2 Query: 578 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 399 VVR+RG +H K K+ L++LRL + ++ V + + ML+ V+ YVAYG N +++ Sbjct: 4 VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLA 63 Query: 398 ELIYKRG 378 L+ RG Sbjct: 64 LLLRLRG 70
>RL30_METJA (P54046) 50S ribosomal protein L30P| Length = 154 Score = 42.0 bits (97), Expect = 0.001 Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 1/157 (0%) Frame = -2 Query: 578 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 399 V+RIRG + L++LRL ++ + V + + ML++V+ YV +G + ++ Sbjct: 5 VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLV 64 Query: 398 ELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEAN-NFLWP 222 +LI KRG R+P N KV E + + + +E+L +I+ KE ++ Sbjct: 65 KLILKRG-------RLP-GNKKVNPEIIKELTGMDVEELAEKIINGEIKLKETPLKPVFR 116 Query: 221 FXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 + + GG G R IN+L+ +M Sbjct: 117 LHPPRKGFERGGIKKPFSVGGALGYRGEKINELLEKM 153
>RL30_METTH (O26132) 50S ribosomal protein L30P| Length = 152 Score = 42.0 bits (97), Expect = 0.001 Identities = 35/156 (22%), Positives = 68/156 (43%) Frame = -2 Query: 578 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 399 VVR+RG + +++LRL +I + V ++ + + ML++ + Y+ +G + +++ Sbjct: 4 VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLT 63 Query: 398 ELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNFLWPF 219 +I KRG R+ + +++ DE + + D + G E F Sbjct: 64 AMIRKRG-------RL-IGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVF 115 Query: 218 XXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 + + EGG G R IN L++RM Sbjct: 116 RLHPPRKGYEGIKKAFNEGGSLGYRGEKINDLLKRM 151
>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P| Length = 158 Score = 41.2 bits (95), Expect = 0.002 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 4/164 (2%) Frame = -2 Query: 590 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 411 +LL ++RIRG + L +LRLR FN + + ML +V PY+ +G + Sbjct: 3 ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDP 62 Query: 410 KSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHE----ILTVGPHFKE 243 +++ LI R L + ++ + E L NI + ++E + + +FK Sbjct: 63 DTLKLLIINR----LETVKGDKVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKL 118 Query: 242 ANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 P + Y G+ G R + IN+L+RRM Sbjct: 119 PIRLHPP-----RGGFKGSVKRPYKNKGEFGYRGDKINELMRRM 157
>RL30_METVA (P14035) 50S ribosomal protein L30P| Length = 154 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/107 (28%), Positives = 51/107 (47%) Frame = -2 Query: 578 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 399 VVR+RG + +++LRL ++ + V + N M+++V+ YV YG + +++ Sbjct: 5 VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLV 64 Query: 398 ELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVG 258 LI KRG L NK + E L K + D + E + G Sbjct: 65 SLILKRG---------RLAGNKRLSEELLKELVELPVDALAEKVLAG 102
>RL30_SULAC (O05642) 50S ribosomal protein L30P| Length = 156 Score = 39.7 bits (91), Expect = 0.007 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 1/161 (0%) Frame = -2 Query: 590 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 411 +L+ V+RIRG A + L +LRL+ FN + + + ML V YV +G N Sbjct: 3 ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62 Query: 410 KSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPHFKEANNF 231 + +R L+ KL R N + + + L +E + L + K F Sbjct: 63 EGLRLLV-----SKLEISRGKKVNEEYVKDKLNVDFQSFVESIKDGKLRLN---KLDEIF 114 Query: 230 LWPFXXX-XXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 111 P + GG+ G R + IN+L+RRM Sbjct: 115 SLPIRLHPPKGGFKGKVSRPFRAGGEFGYRGDKINELIRRM 155
>HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 32.0 bits (71), Expect = 1.5 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327
>HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 32.0 bits (71), Expect = 1.5 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327
>HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)| Length = 1014 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Frame = -2 Query: 566 RGINAMHPKTKKILQLLRLRQ-------IFNGVFLKVNKATINMLRRVEPYVAYGYPNL- 411 + +NA++PK K L +R+R +N + K+ N L+R+ + YGY + Sbjct: 579 KNVNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALKRIANSI-YGYYGIF 637 Query: 410 -KSVRELIYKRGYGKLNK 360 K + I K G GKL + Sbjct: 638 FKPLANYITKMGRGKLKE 655
>HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 552 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -2 Query: 512 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 348 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 253 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 310 Query: 347 ----LTNNKVIDEGLGKHN 303 +T+N +ID +G ++ Sbjct: 311 GPIVMTSNCIIDPTVGAYD 329
>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 31.2 bits (69), Expect = 2.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 19 KRMHVHHPLPNVKQVYPSNTGYYQG 93 + ++V P+P+++Q Y SN GYY G Sbjct: 311 RNLYVTFPIPDLQQYYKSNPGYYLG 335
>HCP_YERPE (Q8ZGE1) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Frame = -2 Query: 464 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR--------IPLTNNKVIDEGLGK 309 IN+ E A+GYP LK L+ G G N+Q I +T+N +ID +G Sbjct: 266 INIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIIDPNVGN 325 Query: 308 H 306 + Sbjct: 326 Y 326
>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)| Length = 154 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/66 (22%), Positives = 35/66 (53%) Frame = -2 Query: 578 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 399 +V++RG MH + L++L + + + + A M+ +V +VA+G P+ +++ Sbjct: 4 LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLE 63 Query: 398 ELIYKR 381 ++ R Sbjct: 64 TVLATR 69
>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced| protein ARG4) Length = 196 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -2 Query: 497 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 357 +G+F+KV+ LR+V+ V GYP L E ++K G+ +++ Sbjct: 98 DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144
>METE_PHOPR (Q6LSD6) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 766 Score = 30.4 bits (67), Expect = 4.2 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 15/99 (15%) Frame = +3 Query: 210 LQLEWPQEVVRLLEVWANGQDLVHKVLDADDVVLPQTLIDN-------FVVGQRDPLLVE 368 +Q++ P + L + WA L ++VL+ + +L T DN V D L V+ Sbjct: 210 VQIDEPVLALELPKPWAESFKLAYQVLNGNTKLLLTTYFDNITHHLDKIVELNIDGLHVD 269 Query: 369 LS-----ITSLVDQLPDTLEVRVPV---SNIWLNPTQHV 461 LS + ++VD LP+ + V N+W HV Sbjct: 270 LSAAPEQLNAVVDALPENWVLSAGVVNGRNVWRADLSHV 308
>IF2_THETN (Q8RA37) Translation initiation factor IF-2| Length = 707 Score = 30.4 bits (67), Expect = 4.2 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 258 ANGQDLVHKVLDADDVVLPQTL-IDNFVVGQRDPLLVELSITSLVDQLPDTLEVRVPVSN 434 A+ D+V V+ ADD V+PQT+ N V PL+V ++ L PD V+ +S Sbjct: 279 ASVTDIVVLVVAADDGVMPQTIEAINHVKAANVPLIVAINKIDLPTANPD--RVKTELSE 336 Query: 435 IWLNPTQ 455 + L P + Sbjct: 337 LGLVPEE 343
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = -2 Query: 500 FNG-VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVID 324 FNG V+ + + + L+ PYV Y +L+ V EL+ +RG G L V+D Sbjct: 73 FNGDVYKALEQTGVEFLKYDPPYV-YTRSDLREVIELMVERGIGAL----------AVVD 121 Query: 323 EGLGKHNIICIEDLVHEILTVGPHFK 246 E L I+ ++ + V H K Sbjct: 122 EDLRVVGIVSERHVISLLANVETHVK 147
>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced| protein ARG13) Length = 193 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/47 (29%), Positives = 28/47 (59%) Frame = -2 Query: 497 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 357 NG+++KV+ A LR+++ V YP L E ++K +G+ +++ Sbjct: 96 NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSER 142
>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17) Length = 295 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%) Frame = +3 Query: 432 NIWLNPTQHV-------NGGLVDLKEHTIKYLPQTQKLQDLLGLW 545 N+W+ P HV +GGL +L E + +LPQ Q LGLW Sbjct: 120 NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLW 164
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 29.6 bits (65), Expect = 7.2 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = +3 Query: 270 DLVHKVLDADDVVLPQTL-IDNFVVGQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLN 446 D+V V+ ADD V+PQT+ N R P++V ++ D P+ + + + Sbjct: 474 DIVVLVVAADDGVMPQTVEAINHAKAARVPIIVAINKIDKPDAKPERVRTELLQHEV--- 530 Query: 447 PTQHVNGGLVDLKEHTIKYLPQTQKLQDLLGLWVHSID 560 + G +VD+ E + K KL +++ L +D Sbjct: 531 QVESFGGDVVDV-EVSAKNKTNLDKLLEMIALQADILD 567
>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 29.3 bits (64), Expect = 9.5 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +1 Query: 19 KRMHVHHPLPNVKQVYPSNTGYYQG 93 + ++V P+P+++Q Y SN G+Y G Sbjct: 311 RNLYVTFPIPDLQQYYKSNPGHYLG 335
>DHPS_STAAW (Q8NXZ2) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAU (O05701) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAS (Q6GBX4) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAR (Q6GJF7) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAN (P64142) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAM (P64141) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>DHPS_STAAC (Q5HIG1) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate| pyrophosphorylase) (DHPS) Length = 267 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 GQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLNP 449 G RD +VE +TSL+ Q +P + IWL+P Sbjct: 133 GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 168
>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2| Length = 883 Score = 29.3 bits (64), Expect = 9.5 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Frame = +3 Query: 270 DLVHKVLDADDVVLPQTL-IDNFVVGQRDPLLVELSITSLVDQLPDTLEVRVPVSNIWLN 446 D+V V+ ADD V+PQT+ N P++V ++ D PD + + N+ Sbjct: 455 DIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKPDRVRTDLLQHNV--- 511 Query: 447 PTQHVNGGLVDLKEHTIKYLPQTQKLQDLLGL 542 + + G +VD+ E + K KL +++ L Sbjct: 512 QVESMGGDVVDV-EVSAKNKINLDKLLEMIAL 542
>END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or| apyrimidinic site) lyase) Length = 219 Score = 29.3 bits (64), Expect = 9.5 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = -2 Query: 482 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIDEGLGKHN 303 +VNK T + +R A Y + + + ELI+ G+ + + I K+++E G+ Sbjct: 55 RVNKVTPALFQRYPDANALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGE-- 112 Query: 302 IICIEDLVHEILTV-GPHFKEAN 237 + + E+LT+ G K AN Sbjct: 113 ---VPQRMEELLTLPGVARKTAN 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,419,729 Number of Sequences: 219361 Number of extensions: 1573023 Number of successful extensions: 5052 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 4871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5026 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)