ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41l22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472477.1| Oryza sativa (japonica cultivar-group), predic... 137 5e-29
2dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
3gb|AY109956.1| Zea mays CL7164_1 mRNA sequence 113 7e-22
4emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 90 9e-15
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
6dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, ... 46 0.13
7gb|BT010251.1| Drosophila melanogaster RE38958 full insert cDNA 44 0.50
8dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
9ref|NM_166229.2| Drosophila melanogaster CG14478-RA, transcript ... 44 0.50
10ref|NM_137370.3| Drosophila melanogaster CG14478-RB, transcript ... 44 0.50
11emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on ch... 44 0.50
12gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, r... 44 0.50
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
14dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
15dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.50
16gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region ... 44 0.50
17gb|AF141921.1|AF141921 Drosophila melanogaster chromosome 2 map ... 44 0.50
18gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47... 44 0.50
19gb|U39794.1|HSU39794 Human lambda clone 247 FRA3B region DNA 44 0.50
20gb|BC109194.1| Homo sapiens SLAM family member 8, mRNA (cDNA clo... 42 2.0
21ref|XM_513918.1| PREDICTED: Pan troglodytes LOC457429 (LOC457429... 42 2.0
22gb|U92830.1| Homo sapiens clone 429-9 CAG trinucleotide repeat g... 42 2.0
23gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, co... 42 2.0
24gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, comp... 42 2.0
25gb|AC005159.1| Homo sapiens BAC clone GS1-262D6 from 7, complete... 42 2.0
26emb|AL590560.9| Human DNA sequence from clone RP11-190A12 on chr... 42 2.0
27emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on ch... 42 2.0
28dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 42 2.0
29dbj|AK074669.1| Homo sapiens cDNA FLJ90188 fis, clone MAMMA10010... 42 2.0
30gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome... 42 2.0
31ref|NM_020125.1| Homo sapiens SLAM family member 8 (SLAMF8), mRNA 42 2.0
32gb|AF146761.1|AF146761 Homo sapiens BCM-like membrane protein pr... 42 2.0
33gb|AC116688.14| Mus musculus chromosome 17, clone RP24-169A20, c... 42 2.0
34emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chr... 42 2.0
35gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, comple... 42 2.0
36gb|AY849915.1| Lycopersicon esculentum 3-phosphoinositide-depend... 40 7.9
37ref|XM_511043.1| PREDICTED: Pan troglodytes similar to autoantig... 40 7.9
38ref|XM_465971.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
39gb|BC043616.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:50... 40 7.9
40ref|XM_365258.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.9
41ref|XM_612647.2| PREDICTED: Bos taurus similar to sperm associat... 40 7.9
42ref|XM_880397.1| PREDICTED: Bos taurus similar to sperm associat... 40 7.9
43ref|XM_880378.1| PREDICTED: Bos taurus similar to sperm associat... 40 7.9
44ref|XM_867501.1| PREDICTED: Bos taurus similar to sperm associat... 40 7.9
45gb|BC069061.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:76995... 40 7.9
46gb|BC064567.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:70... 40 7.9
47ref|XM_957717.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
48ref|XM_958915.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
49ref|XM_328582.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
50ref|XM_329241.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
51gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.9
52gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
53gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
54gb|AF544097.1| Zea mays subsp. mays cultivar T232 granule-bound ... 40 7.9
55gb|AF544095.1| Zea mays subsp. mays cultivar P39 granule-bound s... 40 7.9
56gb|AF544090.1| Zea mays subsp. mays cultivar Mo17 granule-bound ... 40 7.9
57gb|AF544087.1| Zea mays subsp. mays cultivar Ki21 granule-bound ... 40 7.9
58gb|AF544085.1| Zea mays subsp. mays cultivar IL101 granule-bound... 40 7.9
59gb|AF544082.1| Zea mays subsp. mays cultivar Ia2132 granule-boun... 40 7.9
60gb|AF544081.1| Zea mays subsp. mays cultivar F2 granule-bound st... 40 7.9
61gb|AF544080.1| Zea mays subsp. mays cultivar EP1 granule-bound s... 40 7.9
62gb|AF544078.1| Zea mays subsp. mays cultivar CML333 granule-boun... 40 7.9
63gb|AF544077.1| Zea mays subsp. mays cultivar CML258 granule-boun... 40 7.9
64gb|AF544076.1| Zea mays subsp. mays cultivar CML254 granule-boun... 40 7.9
65gb|AF544075.1| Zea mays subsp. mays cultivar CI187 granule-bound... 40 7.9
66gb|AF544069.1| Zea mays subsp. mays cultivar A6 granule-bound st... 40 7.9
67ref|NM_014329.3| Homo sapiens autoantigen (RCD-8), mRNA 40 7.9
68gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.9
69gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
70gb|BC053598.1| Homo sapiens autoantigen, mRNA (cDNA clone IMAGE:... 40 7.9
71emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chr... 40 7.9
72emb|BX842623.1| Neurospora crassa DNA linkage group I BAC clone ... 40 7.9
73gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosom... 40 7.9
74gb|BC056330.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:65779... 40 7.9
75emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chro... 40 7.9
76emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chr... 40 7.9
77dbj|AK128582.1| Homo sapiens cDNA FLJ46741 fis, clone TRACH30213... 40 7.9
78gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence 40 7.9
79gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 7.9
80gb|AE012367.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.9
81dbj|AK162045.1| Mus musculus 12 days embryo female mullerian duc... 40 7.9
82gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.9
83dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
84dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
85dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
86dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
87dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
88dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
89dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
90gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
91dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
92ref|NM_214750.1| Danio rerio zgc:65779 (zgc:65779), mRNA 40 7.9
93dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
94dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
95dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
96dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
97dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
98dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
99dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
100emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in... 40 7.9
101emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in ... 40 7.9
102gb|AY105124.1| Zea mays PCO138363 mRNA sequence 40 7.9
103dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
104dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.9
105gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 7.9
106emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on ch... 40 7.9
107gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
108gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
109emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.9
110emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chr... 40 7.9
111gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 7.9
112gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, comple... 40 7.9
113gb|U17474.1|HSU17474 Human autoantigen mRNA, complete cds 40 7.9
114dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 7.9
115emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chr... 40 7.9
116gb|L26339.1|HUMAUTANT Human autoantigen mRNA, complete cds 40 7.9
117dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 7.9

>ref|XM_472477.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score =  137 bits (69), Expect = 5e-29
 Identities = 149/176 (84%), Gaps = 6/176 (3%)
 Strand = Plus / Minus

                                                                        
Query: 402  tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461
            |||||||||||||||||||||||| || || |||||||| |||||| |||||||||||||
Sbjct: 3138 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 3079

                                                                        
Query: 462  ttgcagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactga 521
            ||| |||| ||| || | |  |||||||||||| ||||||| |||||| |||||||||||
Sbjct: 3078 ttgaagcaaatcgctactgcattgctgagcaagtgcaagcagatcatcaggtgatactga 3019

                                                                    
Query: 522  tgacacttgtttgtcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577
                  |||| | ||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 3018 ------ttgtctatcatctgatgcagcatcctcactgccacgagttggtcgacggt 2969



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 299  ttgtctgctgccttctaaaactaggggaggagacttga 336
            |||||||||||||||||||||| |||||||| ||||||
Sbjct: 3247 ttgtctgctgccttctaaaacttggggaggacacttga 3210



to top

>dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F17, full
            insert sequence
          Length = 3847

 Score =  137 bits (69), Expect = 5e-29
 Identities = 149/176 (84%), Gaps = 6/176 (3%)
 Strand = Plus / Minus

                                                                        
Query: 402  tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461
            |||||||||||||||||||||||| || || |||||||| |||||| |||||||||||||
Sbjct: 3264 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 3205

                                                                        
Query: 462  ttgcagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactga 521
            ||| |||| ||| || | |  |||||||||||| ||||||| |||||| |||||||||||
Sbjct: 3204 ttgaagcaaatcgctactgcattgctgagcaagtgcaagcagatcatcaggtgatactga 3145

                                                                    
Query: 522  tgacacttgtttgtcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577
                  |||| | ||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 3144 ------ttgtctatcatctgatgcagcatcctcactgccacgagttggtcgacggt 3095



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                        
Query: 82   cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138
            |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 3581 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 3522

                    
Query: 139  taattaca 146
            ||||||||
Sbjct: 3521 taattaca 3514



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 289  gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336
            |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 3383 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 3336



to top

>gb|AY109956.1| Zea mays CL7164_1 mRNA sequence
          Length = 1059

 Score =  113 bits (57), Expect = 7e-22
 Identities = 134/159 (84%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                       
Query: 405 ttgaagagttgactccataaaacatgctatatttaatcgggttctctccagctccccttg 464
           |||||| || |||||||| ||||| ||||| || ||||| || ||||||| |||||||||
Sbjct: 528 ttgaagggtcgactccatgaaacaggctatgttcaatcgagtcctctccaactccccttg 469

                                                                       
Query: 465 cagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactgatga 524
           |||||||||||| | |   |||||||||||| ||||||||||||| ||||||||||||| 
Sbjct: 468 cagcagatcactactgcactgctgagcaagcacaagcaaatcatcaggtgatactgatgg 409

                                                  
Query: 525 cacttgtttgtcatctgatgcagcatcttcgctgccacg 563
           |   ||| ||||||| ||||| | |||||| ||||||||
Sbjct: 408 c---tgtctgtcatccgatgctgtatcttcactgccacg 373



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 90  atacaacaccaaaagaatggatcaaaattc 119
           ||||||||||||||||||||||| ||||||
Sbjct: 821 atacaacaccaaaagaatggatcgaaattc 792



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 301 gtctgctgccttctaaaactaggggagga 329
           ||||||||||||||||||||||| |||||
Sbjct: 632 gtctgctgccttctaaaactaggcgagga 604



to top

>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                          
Query: 402    tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461
              |||||||||||||||||||||||| || || |||||||| |||||| |||||||||||||
Sbjct: 127504 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 127445

                                               
Query: 462    ttgcagcagatcactgccgtgttgctgagcaag 494
              ||| |||| ||| || | |  ||||||||||||
Sbjct: 127444 ttgaagcaaatcgctactgcattgctgagcaag 127412



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                          
Query: 82     cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138
              |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 127821 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 127762

                      
Query: 139    taattaca 146
              ||||||||
Sbjct: 127761 taattaca 127754



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                              
Query: 289    gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336
              |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 127623 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 127576



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 535    tcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577
              ||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 127086 tcatctgatgcagcatcctcactgccacgagttggtcgacggt 127044



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                            
Query: 402      tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461
                |||||||||||||||||||||||| || || |||||||| |||||| |||||||||||||
Sbjct: 20880679 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 20880620

                                                 
Query: 462      ttgcagcagatcactgccgtgttgctgagcaag 494
                ||| |||| ||| || | |  ||||||||||||
Sbjct: 20880619 ttgaagcaaatcgctactgcattgctgagcaag 20880587



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                            
Query: 82       cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138
                |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 20880996 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 20880937

                        
Query: 139      taattaca 146
                ||||||||
Sbjct: 20880936 taattaca 20880929



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                                
Query: 289      gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336
                |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 20880798 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 20880751



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 535      tcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577
                ||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 20880261 tcatctgatgcagcatcctcactgccacgagttggtcgacggt 20880219



to top

>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete
             sequences
          Length = 171187

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 156   ggaaaaaatacaggcaacccaaa 178
             |||||||||||||||||||||||
Sbjct: 47460 ggaaaaaatacaggcaacccaaa 47438



to top

>gb|BT010251.1| Drosophila melanogaster RE38958 full insert cDNA
          Length = 3808

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 346  tgatgtgctgctggtgctggtg 367
            ||||||||||||||||||||||
Sbjct: 1363 tgatgtgctgctggtgctggtg 1342



to top

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   aggcaacccaaagaaaagagga 188
             ||||||||||||||||||||||
Sbjct: 70537 aggcaacccaaagaaaagagga 70516



to top

>ref|NM_166229.2| Drosophila melanogaster CG14478-RA, transcript variant A (CG14478),
            mRNA
          Length = 3779

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 346  tgatgtgctgctggtgctggtg 367
            ||||||||||||||||||||||
Sbjct: 1350 tgatgtgctgctggtgctggtg 1329



to top

>ref|NM_137370.3| Drosophila melanogaster CG14478-RB, transcript variant B (CG14478),
            mRNA
          Length = 3656

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 346  tgatgtgctgctggtgctggtg 367
            ||||||||||||||||||||||
Sbjct: 1227 tgatgtgctgctggtgctggtg 1206



to top

>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete
             sequence
          Length = 178972

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 513   tgatactgatgacacttgtttg 534
             ||||||||||||||||||||||
Sbjct: 77177 tgatactgatgacacttgtttg 77156



to top

>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone
             BACR21A09, complete sequence
          Length = 175506

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 346   tgatgtgctgctggtgctggtg 367
             ||||||||||||||||||||||
Sbjct: 54642 tgatgtgctgctggtgctggtg 54621



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 167     aggcaacccaaagaaaagagga 188
               ||||||||||||||||||||||
Sbjct: 8495384 aggcaacccaaagaaaagagga 8495363



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 20921678 cataaaacatgctatattta 20921697



to top

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 167    aggcaacccaaagaaaagagga 188
              ||||||||||||||||||||||
Sbjct: 110339 aggcaacccaaagaaaagagga 110318



to top

>dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F1M23
          Length = 112684

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 78   tgctcttttatcatacaacaccaaaa 103
            |||| |||||||||||||||||||||
Sbjct: 5162 tgcttttttatcatacaacaccaaaa 5187



to top

>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 185763

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 132   atgatgctaattacaatgaatg 153
             ||||||||||||||||||||||
Sbjct: 82911 atgatgctaattacaatgaatg 82932



to top

>gb|AF141921.1|AF141921 Drosophila melanogaster chromosome 2 map 54B roadblock (robl) gene,
             complete cds
          Length = 14637

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 346   tgatgtgctgctggtgctggtg 367
             ||||||||||||||||||||||
Sbjct: 14350 tgatgtgctgctggtgctggtg 14329



to top

>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete
              sequence
          Length = 290783

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 346    tgatgtgctgctggtgctggtg 367
              ||||||||||||||||||||||
Sbjct: 197659 tgatgtgctgctggtgctggtg 197638



to top

>gb|U39794.1|HSU39794 Human lambda clone 247 FRA3B region DNA
          Length = 464

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 132 atgatgctaattacaatgaatg 153
           ||||||||||||||||||||||
Sbjct: 216 atgatgctaattacaatgaatg 237



to top

>gb|BC109194.1| Homo sapiens SLAM family member 8, mRNA (cDNA clone MGC:129578
           IMAGE:40004601), complete cds
          Length = 1147

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 gatgtgctgctggtgctggtgcctg 371
           ||||||||||||||| |||||||||
Sbjct: 723 gatgtgctgctggtggtggtgcctg 747



to top

>ref|XM_513918.1| PREDICTED: Pan troglodytes LOC457429 (LOC457429), mRNA
          Length = 830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 gatgtgctgctggtgctggtgcctg 371
           ||||||||||||||| |||||||||
Sbjct: 717 gatgtgctgctggtggtggtgcctg 741



to top

>gb|U92830.1| Homo sapiens clone 429-9 CAG trinucleotide repeat gene, partial
           sequence
          Length = 228

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 353 ctgctggtgctggtgcctggt 373
           |||||||||||||||||||||
Sbjct: 185 ctgctggtgctggtgcctggt 165



to top

>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence
          Length = 144240

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 177   aagaaaagaggagcttcctttttca 201
             |||||||||||||||| ||||||||
Sbjct: 93797 aagaaaagaggagcttactttttca 93821



to top

>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 296  tacttgtctgctgccttctaa 316
            |||||||||||||||||||||
Sbjct: 5833 tacttgtctgctgccttctaa 5853



to top

>gb|AC005159.1| Homo sapiens BAC clone GS1-262D6 from 7, complete sequence
          Length = 79914

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 521   atgacacttgtttgtcatctgatgcagca 549
             ||||||||  |||||||||||||||||||
Sbjct: 29010 atgacactcatttgtcatctgatgcagca 28982



to top

>emb|AL590560.9| Human DNA sequence from clone RP11-190A12 on chromosome 1 Contains the
             gene for a novel protein (FLJ20442), the gene for a novel
             protein similar to IgG Fc fragment receptors (FCGRs), the
             SLAMF8 gene for SLAM family member 8, two genes for novel
             proteins, the gene for nasopharyngeal epithelium specific
             protein 1 (NESG1) and two CpG islands, complete sequence
          Length = 138862

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 347   gatgtgctgctggtgctggtgcctg 371
             ||||||||||||||| |||||||||
Sbjct: 58257 gatgtgctgctggtggtggtgcctg 58281



to top

>emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on chromosome 13 Contains a
              peptidylprolyl isomerase D (cyclophilin D) (Ppid)
              pseudogene and a sperm specific lactate dehydrogenase 3C
              (Ldh3) pseudogene, complete sequence
          Length = 190594

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 33     ttccagtttctggcgattata 53
              |||||||||||||||||||||
Sbjct: 161481 ttccagtttctggcgattata 161501



to top

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 347     gatgtgctgctggtgctggtg 367
               |||||||||||||||||||||
Sbjct: 1443571 gatgtgctgctggtgctggtg 1443591



to top

>dbj|AK074669.1| Homo sapiens cDNA FLJ90188 fis, clone MAMMA1001043, highly similar
           to B lymphocyte activator macrophage expressed; BCM-like
           membrane protein precursor
          Length = 2998

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 gatgtgctgctggtgctggtgcctg 371
           ||||||||||||||| |||||||||
Sbjct: 846 gatgtgctgctggtggtggtgcctg 870



to top

>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ttccagtttctggcgattata 53
             |||||||||||||||||||||
Sbjct: 93372 ttccagtttctggcgattata 93352



to top

>ref|NM_020125.1| Homo sapiens SLAM family member 8 (SLAMF8), mRNA
          Length = 3197

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 gatgtgctgctggtgctggtgcctg 371
           ||||||||||||||| |||||||||
Sbjct: 785 gatgtgctgctggtggtggtgcctg 809



to top

>gb|AF146761.1|AF146761 Homo sapiens BCM-like membrane protein precursor, mRNA, complete
           cds
          Length = 3197

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 gatgtgctgctggtgctggtgcctg 371
           ||||||||||||||| |||||||||
Sbjct: 785 gatgtgctgctggtggtggtgcctg 809



to top

>gb|AC116688.14| Mus musculus chromosome 17, clone RP24-169A20, complete sequence
          Length = 150860

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    ttccagtttctggcgattata 53
             |||||||||||||||||||||
Sbjct: 54968 ttccagtttctggcgattata 54988



to top

>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete
              sequence
          Length = 162981

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 33     ttccagtttctggcgattata 53
              |||||||||||||||||||||
Sbjct: 104574 ttccagtttctggcgattata 104594



to top

>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence
          Length = 208251

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   tacttgtctgctgccttctaa 316
             |||||||||||||||||||||
Sbjct: 72648 tacttgtctgctgccttctaa 72628



to top

>gb|AY849915.1| Lycopersicon esculentum 3-phosphoinositide-dependent protein
           kinase-1 (Pdk1) mRNA, complete cds
          Length = 1485

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 531 tttgtcatctgatgcagcat 550
           ||||||||||||||||||||
Sbjct: 636 tttgtcatctgatgcagcat 617



to top

>ref|XM_511043.1| PREDICTED: Pan troglodytes similar to autoantigen RCD8 (LOC454178),
            mRNA
          Length = 5256

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 2645 ccttgcagcagatcactgcc 2664



to top

>ref|XM_465971.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 tgctgctggtgctggtgcct 370
           ||||||||||||||||||||
Sbjct: 68  tgctgctggtgctggtgcct 87



to top

>gb|BC043616.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:50940 IMAGE:6065418),
            complete cds
          Length = 4710

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 1953 ccttgcagcagatcactgcc 1972



to top

>ref|XM_365258.1| Magnaporthe grisea 70-15 hypothetical protein (MG01960.4) partial
            mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  gggagtttagggaagacgcc 224
            ||||||||||||||||||||
Sbjct: 1109 gggagtttagggaagacgcc 1128



to top

>ref|XM_612647.2| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform
            1, transcript variant 1 (LOC540689), mRNA
          Length = 4394

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  ctccagctccccttgcagca 469
            ||||||||||||||||||||
Sbjct: 1110 ctccagctccccttgcagca 1091



to top

>ref|XM_880397.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform
            1, transcript variant 6 (LOC540689), mRNA
          Length = 4394

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  ctccagctccccttgcagca 469
            ||||||||||||||||||||
Sbjct: 1110 ctccagctccccttgcagca 1091



to top

>ref|XM_880378.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform
            1, transcript variant 5 (LOC540689), mRNA
          Length = 4184

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  ctccagctccccttgcagca 469
            ||||||||||||||||||||
Sbjct: 1098 ctccagctccccttgcagca 1079



to top

>ref|XM_867501.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform
            1, transcript variant 2 (LOC540689), mRNA
          Length = 4355

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  ctccagctccccttgcagca 469
            ||||||||||||||||||||
Sbjct: 1110 ctccagctccccttgcagca 1091



to top

>gb|BC069061.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:76995 IMAGE:6801952),
           complete cds
          Length = 1428

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tgtgctgctggtgctggtgc 368
           ||||||||||||||||||||
Sbjct: 176 tgtgctgctggtgctggtgc 195



to top

>gb|BC064567.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:70559 IMAGE:5575195),
            complete cds
          Length = 4718

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 1947 ccttgcagcagatcactgcc 1966



to top

>ref|XM_957717.1| Neurospora crassa OR74A hypothetical protein (NCU07877.1) partial
            mRNA
          Length = 2496

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  tgtgctgctggtgctggtgc 368
            ||||||||||||||||||||
Sbjct: 1423 tgtgctgctggtgctggtgc 1442



to top

>ref|XM_958915.1| Neurospora crassa OR74A hypothetical protein (NCU02052.1) partial
            mRNA
          Length = 5613

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 326  aggagacttgagccgggggatgat 349
            |||||||||||||||| |||||||
Sbjct: 5348 aggagacttgagccggaggatgat 5325



to top

>ref|XM_328582.1| Neurospora crassa OR74A hypothetical protein (NCU07877.1) partial
            mRNA
          Length = 2496

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  tgtgctgctggtgctggtgc 368
            ||||||||||||||||||||
Sbjct: 1423 tgtgctgctggtgctggtgc 1442



to top

>ref|XM_329241.1| Neurospora crassa OR74A hypothetical protein (NCU02052.1) partial
            mRNA
          Length = 5613

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 326  aggagacttgagccgggggatgat 349
            |||||||||||||||| |||||||
Sbjct: 5348 aggagacttgagccggaggatgat 5325



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 345     atgatgtgctgctggtgctggtgc 368
               |||| |||||||||||||||||||
Sbjct: 4555855 atgaggtgctgctggtgctggtgc 4555832



to top

>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0082F22, complete sequence
          Length = 176038

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    cataaaacatgctatattta 439
              ||||||||||||||||||||
Sbjct: 141885 cataaaacatgctatattta 141904



to top

>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1240_E09, complete sequence
          Length = 118742

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 13107 cataaaacatgctatattta 13126



to top

>gb|AF544097.1| Zea mays subsp. mays cultivar T232 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4463

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1181 ctgctggtgctggtgcctgg 1162



to top

>gb|AF544095.1| Zea mays subsp. mays cultivar P39 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4438

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1188 ctgctggtgctggtgcctgg 1169



to top

>gb|AF544090.1| Zea mays subsp. mays cultivar Mo17 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4436

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1188 ctgctggtgctggtgcctgg 1169



to top

>gb|AF544087.1| Zea mays subsp. mays cultivar Ki21 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4436

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1188 ctgctggtgctggtgcctgg 1169



to top

>gb|AF544085.1| Zea mays subsp. mays cultivar IL101 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4436

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1188 ctgctggtgctggtgcctgg 1169



to top

>gb|AF544082.1| Zea mays subsp. mays cultivar Ia2132 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4443

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1191 ctgctggtgctggtgcctgg 1172



to top

>gb|AF544081.1| Zea mays subsp. mays cultivar F2 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4475

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1191 ctgctggtgctggtgcctgg 1172



to top

>gb|AF544080.1| Zea mays subsp. mays cultivar EP1 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4428

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1149 ctgctggtgctggtgcctgg 1130



to top

>gb|AF544078.1| Zea mays subsp. mays cultivar CML333 granule-bound starch synthase
           (waxy1) gene, partial sequence
          Length = 4210

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 ctgctggtgctggtgcctgg 372
           ||||||||||||||||||||
Sbjct: 930 ctgctggtgctggtgcctgg 911



to top

>gb|AF544077.1| Zea mays subsp. mays cultivar CML258 granule-bound starch synthase
           (waxy1) gene, partial sequence
          Length = 3533

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 ctgctggtgctggtgcctgg 372
           ||||||||||||||||||||
Sbjct: 618 ctgctggtgctggtgcctgg 599



to top

>gb|AF544076.1| Zea mays subsp. mays cultivar CML254 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4416

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1140 ctgctggtgctggtgcctgg 1121



to top

>gb|AF544075.1| Zea mays subsp. mays cultivar CI187 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4430

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1182 ctgctggtgctggtgcctgg 1163



to top

>gb|AF544069.1| Zea mays subsp. mays cultivar A6 granule-bound starch synthase
            (waxy1) gene, partial sequence
          Length = 4463

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ctgctggtgctggtgcctgg 372
            ||||||||||||||||||||
Sbjct: 1182 ctgctggtgctggtgcctgg 1163



to top

>ref|NM_014329.3| Homo sapiens autoantigen (RCD-8), mRNA
          Length = 4739

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 1977 ccttgcagcagatcactgcc 1996



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 12098224 cataaaacatgctatattta 12098243



to top

>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 40863 cataaaacatgctatattta 40844



to top

>gb|BC053598.1| Homo sapiens autoantigen, mRNA (cDNA clone IMAGE:5741107), partial
            cds
          Length = 3950

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 1190 ccttgcagcagatcactgcc 1209



to top

>emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chromosome 10 Contains the
             3' end of the gene for adenovirus 5 E1A binding protein
             (BS69), the gene for a novel protein (KIAA0934) and four
             CpG islands, complete sequence
          Length = 179755

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   gtgctgctggtgctggtgcctggt 373
             ||||||||| ||||||||||||||
Sbjct: 31720 gtgctgctgatgctggtgcctggt 31697



to top

>emb|BX842623.1| Neurospora crassa DNA linkage group I BAC clone B2I10
          Length = 83703

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  aggagacttgagccgggggatgat 349
            |||||||||||||||| |||||||
Sbjct: 6535 aggagacttgagccggaggatgat 6558



to top

>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence
          Length = 215002

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   actatgggagaatttgtact 299
             ||||||||||||||||||||
Sbjct: 48052 actatgggagaatttgtact 48033



to top

>gb|BC056330.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:65779 IMAGE:6789473),
           complete cds
          Length = 1887

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tgtgctgctggtgctggtgc 368
           ||||||||||||||||||||
Sbjct: 222 tgtgctgctggtgctggtgc 241



to top

>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a
              ribosomal protein L13 (Rpl13) pseudogene, a novel gene and
              two CpG islands, complete sequence
          Length = 215675

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     ttccagtttctggcgattat 52
              ||||||||||||||||||||
Sbjct: 137233 ttccagtttctggcgattat 137252



to top

>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 208028

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     ttccagtttctggcgattat 52
              ||||||||||||||||||||
Sbjct: 123116 ttccagtttctggcgattat 123135



to top

>dbj|AK128582.1| Homo sapiens cDNA FLJ46741 fis, clone TRACH3021373, highly  similar
            to Homo sapiens autoantigen (RCD-8)
          Length = 5266

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 2524 ccttgcagcagatcactgcc 2543



to top

>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence
          Length = 172715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gatgctaattacaatgaatg 153
             ||||||||||||||||||||
Sbjct: 54630 gatgctaattacaatgaatg 54649



to top

>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     tgtgctgctggtgctggtgc 368
               ||||||||||||||||||||
Sbjct: 2219917 tgtgctgctggtgctggtgc 2219936



to top

>gb|AE012367.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 275 of
             460 of the complete genome
          Length = 11245

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   tgtgctgctggtgctggtgc 368
             ||||||||||||||||||||
Sbjct: 10284 tgtgctgctggtgctggtgc 10265



to top

>dbj|AK162045.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820429L09 product:unclassifiable, full
            insert sequence
          Length = 2404

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  actatgggagaatttgtact 299
            ||||||||||||||||||||
Sbjct: 1190 actatgggagaatttgtact 1209



to top

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     tgtgctgctggtgctggtgc 368
               ||||||||||||||||||||
Sbjct: 1873092 tgtgctgctggtgctggtgc 1873111



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cataaaacatgctatattta 439
               ||||||||||||||||||||
Sbjct: 6381733 cataaaacatgctatattta 6381752



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 21688810 cataaaacatgctatattta 21688791



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 16943513 cataaaacatgctatattta 16943494



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 11133515 cataaaacatgctatattta 11133534



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 28118285 cataaaacatgctatattta 28118304



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 18935177 cataaaacatgctatattta 18935158



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 13179108 cataaaacatgctatattta 13179127



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 12094987 cataaaacatgctatattta 12095006



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 23069468 cataaaacatgctatattta 23069487



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 351      tgctgctggtgctggtgcct 370
                ||||||||||||||||||||
Sbjct: 18646644 tgctgctggtgctggtgcct 18646663



to top

>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20,
              complete sequence
          Length = 144969

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    cataaaacatgctatattta 439
              ||||||||||||||||||||
Sbjct: 118804 cataaaacatgctatattta 118823



to top

>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1110C07
          Length = 173859

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    cataaaacatgctatattta 439
              ||||||||||||||||||||
Sbjct: 140120 cataaaacatgctatattta 140139



to top

>ref|NM_214750.1| Danio rerio zgc:65779 (zgc:65779), mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tgtgctgctggtgctggtgc 368
           ||||||||||||||||||||
Sbjct: 222 tgtgctgctggtgctggtgc 241



to top

>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_D09
          Length = 138615

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 36506 cataaaacatgctatattta 36525



to top

>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 93865 cataaaacatgctatattta 93884



to top

>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    cataaaacatgctatattta 439
              ||||||||||||||||||||
Sbjct: 101581 cataaaacatgctatattta 101600



to top

>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0430F03
          Length = 183095

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 37162 cataaaacatgctatattta 37143



to top

>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1471_E11
          Length = 103912

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   tgctgctggtgctggtgcct 370
             ||||||||||||||||||||
Sbjct: 73000 tgctgctggtgctggtgcct 73019



to top

>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1484_G09
          Length = 124695

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 90524 cataaaacatgctatattta 90505



to top

>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1446H11
          Length = 135488

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    cataaaacatgctatattta 439
              ||||||||||||||||||||
Sbjct: 104121 cataaaacatgctatattta 104140



to top

>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18,
             complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   aatgggggaaaaaatacagg 169
             ||||||||||||||||||||
Sbjct: 22223 aatgggggaaaaaatacagg 22204



to top

>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17,
              complete sequence
          Length = 237313

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aaatgttgctctcagcagtt 257
              ||||||||||||||||||||
Sbjct: 236918 aaatgttgctctcagcagtt 236899



to top

>gb|AY105124.1| Zea mays PCO138363 mRNA sequence
          Length = 1066

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 atgtgctgctggtgctggtg 367
           ||||||||||||||||||||
Sbjct: 595 atgtgctgctggtgctggtg 576



to top

>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 92031 cataaaacatgctatattta 92050



to top

>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    aaaaatacaggcaacccaaa 178
              ||||||||||||||||||||
Sbjct: 122210 aaaaatacaggcaacccaaa 122191



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     tgctgctggtgctggtgcct 370
               ||||||||||||||||||||
Sbjct: 4137109 tgctgctggtgctggtgcct 4137090



to top

>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
             sequence
          Length = 223059

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   aattacaatgaatgggggaaaaaa 163
             |||||||||| |||||||||||||
Sbjct: 22564 aattacaatgtatgggggaaaaaa 22587



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      cataaaacatgctatattta 439
                ||||||||||||||||||||
Sbjct: 21999009 cataaaacatgctatattta 21998990



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cataaaacatgctatattta 439
               ||||||||||||||||||||
Sbjct: 6381608 cataaaacatgctatattta 6381627



to top

>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109555

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cataaaacatgctatattta 439
             ||||||||||||||||||||
Sbjct: 43281 cataaaacatgctatattta 43300



to top

>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
             sequence
          Length = 209214

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ataatacacaacatgatgct 139
             ||||||||||||||||||||
Sbjct: 58172 ataatacacaacatgatgct 58153



to top

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     tgtgctgctggtgctggtgc 368
               ||||||||||||||||||||
Sbjct: 2050315 tgtgctgctggtgctggtgc 2050296



to top

>gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, complete sequence
          Length = 168588

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    actatgggagaatttgtact 299
              ||||||||||||||||||||
Sbjct: 151394 actatgggagaatttgtact 151413



to top

>gb|U17474.1|HSU17474 Human autoantigen mRNA, complete cds
          Length = 3332

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 460 ccttgcagcagatcactgcc 479
           ||||||||||||||||||||
Sbjct: 587 ccttgcagcagatcactgcc 606



to top

>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129,
             complete sequence
          Length = 110487

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   gcaacccaaagaaaagaggagctt 192
             ||||| ||||||||||||||||||
Sbjct: 68770 gcaacgcaaagaaaagaggagctt 68747



to top

>emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chromosome 2, complete
             sequence
          Length = 184819

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ttccagtttctggcgattat 52
             ||||||||||||||||||||
Sbjct: 29841 ttccagtttctggcgattat 29860



to top

>gb|L26339.1|HUMAUTANT Human autoantigen mRNA, complete cds
          Length = 4659

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ccttgcagcagatcactgcc 479
            ||||||||||||||||||||
Sbjct: 1947 ccttgcagcagatcactgcc 1966



to top

>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    aaaaatacaggcaacccaaa 178
              ||||||||||||||||||||
Sbjct: 110433 aaaaatacaggcaacccaaa 110414


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,278,357
Number of Sequences: 3902068
Number of extensions: 6278357
Number of successful extensions: 192821
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 191854
Number of HSP's gapped (non-prelim): 966
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top