| Clone Name | rbaal41l22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472477.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3354 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%), Gaps = 6/176 (3%) Strand = Plus / Minus Query: 402 tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461 |||||||||||||||||||||||| || || |||||||| |||||| ||||||||||||| Sbjct: 3138 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 3079 Query: 462 ttgcagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactga 521 ||| |||| ||| || | | |||||||||||| ||||||| |||||| ||||||||||| Sbjct: 3078 ttgaagcaaatcgctactgcattgctgagcaagtgcaagcagatcatcaggtgatactga 3019 Query: 522 tgacacttgtttgtcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577 |||| | ||||||||||||||||| || ||||||||||| ||| |||||| Sbjct: 3018 ------ttgtctatcatctgatgcagcatcctcactgccacgagttggtcgacggt 2969 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 299 ttgtctgctgccttctaaaactaggggaggagacttga 336 |||||||||||||||||||||| |||||||| |||||| Sbjct: 3247 ttgtctgctgccttctaaaacttggggaggacacttga 3210
>dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F17, full insert sequence Length = 3847 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%), Gaps = 6/176 (3%) Strand = Plus / Minus Query: 402 tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461 |||||||||||||||||||||||| || || |||||||| |||||| ||||||||||||| Sbjct: 3264 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 3205 Query: 462 ttgcagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactga 521 ||| |||| ||| || | | |||||||||||| ||||||| |||||| ||||||||||| Sbjct: 3204 ttgaagcaaatcgctactgcattgctgagcaagtgcaagcagatcatcaggtgatactga 3145 Query: 522 tgacacttgtttgtcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577 |||| | ||||||||||||||||| || ||||||||||| ||| |||||| Sbjct: 3144 ------ttgtctatcatctgatgcagcatcctcactgccacgagttggtcgacggt 3095 Score = 83.8 bits (42), Expect = 6e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 82 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 3581 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 3522 Query: 139 taattaca 146 |||||||| Sbjct: 3521 taattaca 3514 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 289 gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336 |||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 3383 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 3336
>gb|AY109956.1| Zea mays CL7164_1 mRNA sequence Length = 1059 Score = 113 bits (57), Expect = 7e-22 Identities = 134/159 (84%), Gaps = 3/159 (1%) Strand = Plus / Minus Query: 405 ttgaagagttgactccataaaacatgctatatttaatcgggttctctccagctccccttg 464 |||||| || |||||||| ||||| ||||| || ||||| || ||||||| ||||||||| Sbjct: 528 ttgaagggtcgactccatgaaacaggctatgttcaatcgagtcctctccaactccccttg 469 Query: 465 cagcagatcactgccgtgttgctgagcaagcgcaagcaaatcatccggtgatactgatga 524 |||||||||||| | | |||||||||||| ||||||||||||| ||||||||||||| Sbjct: 468 cagcagatcactactgcactgctgagcaagcacaagcaaatcatcaggtgatactgatgg 409 Query: 525 cacttgtttgtcatctgatgcagcatcttcgctgccacg 563 | ||| ||||||| ||||| | |||||| |||||||| Sbjct: 408 c---tgtctgtcatccgatgctgtatcttcactgccacg 373 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 90 atacaacaccaaaagaatggatcaaaattc 119 ||||||||||||||||||||||| |||||| Sbjct: 821 atacaacaccaaaagaatggatcgaaattc 792 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 301 gtctgctgccttctaaaactaggggagga 329 ||||||||||||||||||||||| ||||| Sbjct: 632 gtctgctgccttctaaaactaggcgagga 604
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 402 tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461 |||||||||||||||||||||||| || || |||||||| |||||| ||||||||||||| Sbjct: 127504 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 127445 Query: 462 ttgcagcagatcactgccgtgttgctgagcaag 494 ||| |||| ||| || | | |||||||||||| Sbjct: 127444 ttgaagcaaatcgctactgcattgctgagcaag 127412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 82 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 127821 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 127762 Query: 139 taattaca 146 |||||||| Sbjct: 127761 taattaca 127754 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 289 gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336 |||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 127623 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 127576 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 535 tcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577 ||||||||||||||||| || ||||||||||| ||| |||||| Sbjct: 127086 tcatctgatgcagcatcctcactgccacgagttggtcgacggt 127044
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 402 tgattgaagagttgactccataaaacatgctatatttaatcgggttctctccagctcccc 461 |||||||||||||||||||||||| || || |||||||| |||||| ||||||||||||| Sbjct: 20880679 tgattgaagagttgactccataaagcacgcaatatttaaccgggttttctccagctcccc 20880620 Query: 462 ttgcagcagatcactgccgtgttgctgagcaag 494 ||| |||| ||| || | | |||||||||||| Sbjct: 20880619 ttgaagcaaatcgctactgcattgctgagcaag 20880587 Score = 83.8 bits (42), Expect = 6e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 82 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 138 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 20880996 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 20880937 Query: 139 taattaca 146 |||||||| Sbjct: 20880936 taattaca 20880929 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 289 gaatttgtacttgtctgctgccttctaaaactaggggaggagacttga 336 |||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 20880798 gaatttgtacttgtctgctgccttctaaaacttggggaggacacttga 20880751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 535 tcatctgatgcagcatcttcgctgccacgagtgggttgacggt 577 ||||||||||||||||| || ||||||||||| ||| |||||| Sbjct: 20880261 tcatctgatgcagcatcctcactgccacgagttggtcgacggt 20880219
>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete sequences Length = 171187 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 156 ggaaaaaatacaggcaacccaaa 178 ||||||||||||||||||||||| Sbjct: 47460 ggaaaaaatacaggcaacccaaa 47438
>gb|BT010251.1| Drosophila melanogaster RE38958 full insert cDNA Length = 3808 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 1363 tgatgtgctgctggtgctggtg 1342
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 aggcaacccaaagaaaagagga 188 |||||||||||||||||||||| Sbjct: 70537 aggcaacccaaagaaaagagga 70516
>ref|NM_166229.2| Drosophila melanogaster CG14478-RA, transcript variant A (CG14478), mRNA Length = 3779 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 1350 tgatgtgctgctggtgctggtg 1329
>ref|NM_137370.3| Drosophila melanogaster CG14478-RB, transcript variant B (CG14478), mRNA Length = 3656 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 1227 tgatgtgctgctggtgctggtg 1206
>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete sequence Length = 178972 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 513 tgatactgatgacacttgtttg 534 |||||||||||||||||||||| Sbjct: 77177 tgatactgatgacacttgtttg 77156
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 54642 tgatgtgctgctggtgctggtg 54621
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 aggcaacccaaagaaaagagga 188 |||||||||||||||||||||| Sbjct: 8495384 aggcaacccaaagaaaagagga 8495363 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 20921678 cataaaacatgctatattta 20921697
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 aggcaacccaaagaaaagagga 188 |||||||||||||||||||||| Sbjct: 110339 aggcaacccaaagaaaagagga 110318
>dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F1M23 Length = 112684 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tgctcttttatcatacaacaccaaaa 103 |||| ||||||||||||||||||||| Sbjct: 5162 tgcttttttatcatacaacaccaaaa 5187
>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence Length = 185763 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 atgatgctaattacaatgaatg 153 |||||||||||||||||||||| Sbjct: 82911 atgatgctaattacaatgaatg 82932
>gb|AF141921.1|AF141921 Drosophila melanogaster chromosome 2 map 54B roadblock (robl) gene, complete cds Length = 14637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 14350 tgatgtgctgctggtgctggtg 14329
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 tgatgtgctgctggtgctggtg 367 |||||||||||||||||||||| Sbjct: 197659 tgatgtgctgctggtgctggtg 197638
>gb|U39794.1|HSU39794 Human lambda clone 247 FRA3B region DNA Length = 464 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 atgatgctaattacaatgaatg 153 |||||||||||||||||||||| Sbjct: 216 atgatgctaattacaatgaatg 237
>gb|BC109194.1| Homo sapiens SLAM family member 8, mRNA (cDNA clone MGC:129578 IMAGE:40004601), complete cds Length = 1147 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 723 gatgtgctgctggtggtggtgcctg 747
>ref|XM_513918.1| PREDICTED: Pan troglodytes LOC457429 (LOC457429), mRNA Length = 830 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 717 gatgtgctgctggtggtggtgcctg 741
>gb|U92830.1| Homo sapiens clone 429-9 CAG trinucleotide repeat gene, partial sequence Length = 228 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctggt 373 ||||||||||||||||||||| Sbjct: 185 ctgctggtgctggtgcctggt 165
>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence Length = 144240 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 aagaaaagaggagcttcctttttca 201 |||||||||||||||| |||||||| Sbjct: 93797 aagaaaagaggagcttactttttca 93821
>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence Length = 201286 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 tacttgtctgctgccttctaa 316 ||||||||||||||||||||| Sbjct: 5833 tacttgtctgctgccttctaa 5853
>gb|AC005159.1| Homo sapiens BAC clone GS1-262D6 from 7, complete sequence Length = 79914 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 521 atgacacttgtttgtcatctgatgcagca 549 |||||||| ||||||||||||||||||| Sbjct: 29010 atgacactcatttgtcatctgatgcagca 28982
>emb|AL590560.9| Human DNA sequence from clone RP11-190A12 on chromosome 1 Contains the gene for a novel protein (FLJ20442), the gene for a novel protein similar to IgG Fc fragment receptors (FCGRs), the SLAMF8 gene for SLAM family member 8, two genes for novel proteins, the gene for nasopharyngeal epithelium specific protein 1 (NESG1) and two CpG islands, complete sequence Length = 138862 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 58257 gatgtgctgctggtggtggtgcctg 58281
>emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on chromosome 13 Contains a peptidylprolyl isomerase D (cyclophilin D) (Ppid) pseudogene and a sperm specific lactate dehydrogenase 3C (Ldh3) pseudogene, complete sequence Length = 190594 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattata 53 ||||||||||||||||||||| Sbjct: 161481 ttccagtttctggcgattata 161501
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtg 367 ||||||||||||||||||||| Sbjct: 1443571 gatgtgctgctggtgctggtg 1443591
>dbj|AK074669.1| Homo sapiens cDNA FLJ90188 fis, clone MAMMA1001043, highly similar to B lymphocyte activator macrophage expressed; BCM-like membrane protein precursor Length = 2998 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 846 gatgtgctgctggtggtggtgcctg 870
>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence Length = 184868 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 ttccagtttctggcgattata 53 ||||||||||||||||||||| Sbjct: 93372 ttccagtttctggcgattata 93352
>ref|NM_020125.1| Homo sapiens SLAM family member 8 (SLAMF8), mRNA Length = 3197 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 785 gatgtgctgctggtggtggtgcctg 809
>gb|AF146761.1|AF146761 Homo sapiens BCM-like membrane protein precursor, mRNA, complete cds Length = 3197 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gatgtgctgctggtgctggtgcctg 371 ||||||||||||||| ||||||||| Sbjct: 785 gatgtgctgctggtggtggtgcctg 809
>gb|AC116688.14| Mus musculus chromosome 17, clone RP24-169A20, complete sequence Length = 150860 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattata 53 ||||||||||||||||||||| Sbjct: 54968 ttccagtttctggcgattata 54988
>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete sequence Length = 162981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattata 53 ||||||||||||||||||||| Sbjct: 104574 ttccagtttctggcgattata 104594
>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence Length = 208251 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 tacttgtctgctgccttctaa 316 ||||||||||||||||||||| Sbjct: 72648 tacttgtctgctgccttctaa 72628
>gb|AY849915.1| Lycopersicon esculentum 3-phosphoinositide-dependent protein kinase-1 (Pdk1) mRNA, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 tttgtcatctgatgcagcat 550 |||||||||||||||||||| Sbjct: 636 tttgtcatctgatgcagcat 617
>ref|XM_511043.1| PREDICTED: Pan troglodytes similar to autoantigen RCD8 (LOC454178), mRNA Length = 5256 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 2645 ccttgcagcagatcactgcc 2664
>ref|XM_465971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tgctgctggtgctggtgcct 370 |||||||||||||||||||| Sbjct: 68 tgctgctggtgctggtgcct 87
>gb|BC043616.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:50940 IMAGE:6065418), complete cds Length = 4710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 1953 ccttgcagcagatcactgcc 1972
>ref|XM_365258.1| Magnaporthe grisea 70-15 hypothetical protein (MG01960.4) partial mRNA Length = 1170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gggagtttagggaagacgcc 224 |||||||||||||||||||| Sbjct: 1109 gggagtttagggaagacgcc 1128
>ref|XM_612647.2| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform 1, transcript variant 1 (LOC540689), mRNA Length = 4394 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ctccagctccccttgcagca 469 |||||||||||||||||||| Sbjct: 1110 ctccagctccccttgcagca 1091
>ref|XM_880397.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform 1, transcript variant 6 (LOC540689), mRNA Length = 4394 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ctccagctccccttgcagca 469 |||||||||||||||||||| Sbjct: 1110 ctccagctccccttgcagca 1091
>ref|XM_880378.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform 1, transcript variant 5 (LOC540689), mRNA Length = 4184 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ctccagctccccttgcagca 469 |||||||||||||||||||| Sbjct: 1098 ctccagctccccttgcagca 1079
>ref|XM_867501.1| PREDICTED: Bos taurus similar to sperm associated antigen 9 isoform 1, transcript variant 2 (LOC540689), mRNA Length = 4355 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ctccagctccccttgcagca 469 |||||||||||||||||||| Sbjct: 1110 ctccagctccccttgcagca 1091
>gb|BC069061.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:76995 IMAGE:6801952), complete cds Length = 1428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 176 tgtgctgctggtgctggtgc 195
>gb|BC064567.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:70559 IMAGE:5575195), complete cds Length = 4718 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 1947 ccttgcagcagatcactgcc 1966
>ref|XM_957717.1| Neurospora crassa OR74A hypothetical protein (NCU07877.1) partial mRNA Length = 2496 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 1423 tgtgctgctggtgctggtgc 1442
>ref|XM_958915.1| Neurospora crassa OR74A hypothetical protein (NCU02052.1) partial mRNA Length = 5613 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 aggagacttgagccgggggatgat 349 |||||||||||||||| ||||||| Sbjct: 5348 aggagacttgagccggaggatgat 5325
>ref|XM_328582.1| Neurospora crassa OR74A hypothetical protein (NCU07877.1) partial mRNA Length = 2496 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 1423 tgtgctgctggtgctggtgc 1442
>ref|XM_329241.1| Neurospora crassa OR74A hypothetical protein (NCU02052.1) partial mRNA Length = 5613 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 aggagacttgagccgggggatgat 349 |||||||||||||||| ||||||| Sbjct: 5348 aggagacttgagccggaggatgat 5325
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 atgatgtgctgctggtgctggtgc 368 |||| ||||||||||||||||||| Sbjct: 4555855 atgaggtgctgctggtgctggtgc 4555832
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 141885 cataaaacatgctatattta 141904
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 13107 cataaaacatgctatattta 13126
>gb|AF544097.1| Zea mays subsp. mays cultivar T232 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4463 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1181 ctgctggtgctggtgcctgg 1162
>gb|AF544095.1| Zea mays subsp. mays cultivar P39 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4438 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1188 ctgctggtgctggtgcctgg 1169
>gb|AF544090.1| Zea mays subsp. mays cultivar Mo17 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4436 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1188 ctgctggtgctggtgcctgg 1169
>gb|AF544087.1| Zea mays subsp. mays cultivar Ki21 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4436 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1188 ctgctggtgctggtgcctgg 1169
>gb|AF544085.1| Zea mays subsp. mays cultivar IL101 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4436 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1188 ctgctggtgctggtgcctgg 1169
>gb|AF544082.1| Zea mays subsp. mays cultivar Ia2132 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1191 ctgctggtgctggtgcctgg 1172
>gb|AF544081.1| Zea mays subsp. mays cultivar F2 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4475 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1191 ctgctggtgctggtgcctgg 1172
>gb|AF544080.1| Zea mays subsp. mays cultivar EP1 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1149 ctgctggtgctggtgcctgg 1130
>gb|AF544078.1| Zea mays subsp. mays cultivar CML333 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4210 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 930 ctgctggtgctggtgcctgg 911
>gb|AF544077.1| Zea mays subsp. mays cultivar CML258 granule-bound starch synthase (waxy1) gene, partial sequence Length = 3533 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 618 ctgctggtgctggtgcctgg 599
>gb|AF544076.1| Zea mays subsp. mays cultivar CML254 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4416 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1140 ctgctggtgctggtgcctgg 1121
>gb|AF544075.1| Zea mays subsp. mays cultivar CI187 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4430 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1182 ctgctggtgctggtgcctgg 1163
>gb|AF544069.1| Zea mays subsp. mays cultivar A6 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4463 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgctggtgctggtgcctgg 372 |||||||||||||||||||| Sbjct: 1182 ctgctggtgctggtgcctgg 1163
>ref|NM_014329.3| Homo sapiens autoantigen (RCD-8), mRNA Length = 4739 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 1977 ccttgcagcagatcactgcc 1996
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 12098224 cataaaacatgctatattta 12098243
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 40863 cataaaacatgctatattta 40844
>gb|BC053598.1| Homo sapiens autoantigen, mRNA (cDNA clone IMAGE:5741107), partial cds Length = 3950 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 1190 ccttgcagcagatcactgcc 1209
>emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chromosome 10 Contains the 3' end of the gene for adenovirus 5 E1A binding protein (BS69), the gene for a novel protein (KIAA0934) and four CpG islands, complete sequence Length = 179755 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtgctgctggtgctggtgcctggt 373 ||||||||| |||||||||||||| Sbjct: 31720 gtgctgctgatgctggtgcctggt 31697
>emb|BX842623.1| Neurospora crassa DNA linkage group I BAC clone B2I10 Length = 83703 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 aggagacttgagccgggggatgat 349 |||||||||||||||| ||||||| Sbjct: 6535 aggagacttgagccggaggatgat 6558
>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence Length = 215002 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 actatgggagaatttgtact 299 |||||||||||||||||||| Sbjct: 48052 actatgggagaatttgtact 48033
>gb|BC056330.1| Danio rerio zgc:65779, mRNA (cDNA clone MGC:65779 IMAGE:6789473), complete cds Length = 1887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 222 tgtgctgctggtgctggtgc 241
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattat 52 |||||||||||||||||||| Sbjct: 137233 ttccagtttctggcgattat 137252
>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG island, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattat 52 |||||||||||||||||||| Sbjct: 123116 ttccagtttctggcgattat 123135
>dbj|AK128582.1| Homo sapiens cDNA FLJ46741 fis, clone TRACH3021373, highly similar to Homo sapiens autoantigen (RCD-8) Length = 5266 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 2524 ccttgcagcagatcactgcc 2543
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gatgctaattacaatgaatg 153 |||||||||||||||||||| Sbjct: 54630 gatgctaattacaatgaatg 54649
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 2219917 tgtgctgctggtgctggtgc 2219936
>gb|AE012367.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 275 of 460 of the complete genome Length = 11245 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 10284 tgtgctgctggtgctggtgc 10265
>dbj|AK162045.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820429L09 product:unclassifiable, full insert sequence Length = 2404 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 actatgggagaatttgtact 299 |||||||||||||||||||| Sbjct: 1190 actatgggagaatttgtact 1209
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 1873092 tgtgctgctggtgctggtgc 1873111
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 6381733 cataaaacatgctatattta 6381752
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 21688810 cataaaacatgctatattta 21688791
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 16943513 cataaaacatgctatattta 16943494 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 11133515 cataaaacatgctatattta 11133534
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 28118285 cataaaacatgctatattta 28118304 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 18935177 cataaaacatgctatattta 18935158
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 13179108 cataaaacatgctatattta 13179127
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 12094987 cataaaacatgctatattta 12095006
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 23069468 cataaaacatgctatattta 23069487 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tgctgctggtgctggtgcct 370 |||||||||||||||||||| Sbjct: 18646644 tgctgctggtgctggtgcct 18646663
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 118804 cataaaacatgctatattta 118823
>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1110C07 Length = 173859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 140120 cataaaacatgctatattta 140139
>ref|NM_214750.1| Danio rerio zgc:65779 (zgc:65779), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 222 tgtgctgctggtgctggtgc 241
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 36506 cataaaacatgctatattta 36525
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 93865 cataaaacatgctatattta 93884
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 101581 cataaaacatgctatattta 101600
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 37162 cataaaacatgctatattta 37143
>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1471_E11 Length = 103912 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tgctgctggtgctggtgcct 370 |||||||||||||||||||| Sbjct: 73000 tgctgctggtgctggtgcct 73019
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 90524 cataaaacatgctatattta 90505
>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1446H11 Length = 135488 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 104121 cataaaacatgctatattta 104140
>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 aatgggggaaaaaatacagg 169 |||||||||||||||||||| Sbjct: 22223 aatgggggaaaaaatacagg 22204
>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17, complete sequence Length = 237313 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 aaatgttgctctcagcagtt 257 |||||||||||||||||||| Sbjct: 236918 aaatgttgctctcagcagtt 236899
>gb|AY105124.1| Zea mays PCO138363 mRNA sequence Length = 1066 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 atgtgctgctggtgctggtg 367 |||||||||||||||||||| Sbjct: 595 atgtgctgctggtgctggtg 576
>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0560B10, complete sequence Length = 108295 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 92031 cataaaacatgctatattta 92050
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaaaatacaggcaacccaaa 178 |||||||||||||||||||| Sbjct: 122210 aaaaatacaggcaacccaaa 122191
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tgctgctggtgctggtgcct 370 |||||||||||||||||||| Sbjct: 4137109 tgctgctggtgctggtgcct 4137090
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 aattacaatgaatgggggaaaaaa 163 |||||||||| ||||||||||||| Sbjct: 22564 aattacaatgtatgggggaaaaaa 22587
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 21999009 cataaaacatgctatattta 21998990
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 6381608 cataaaacatgctatattta 6381627
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataaaacatgctatattta 439 |||||||||||||||||||| Sbjct: 43281 cataaaacatgctatattta 43300
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ataatacacaacatgatgct 139 |||||||||||||||||||| Sbjct: 58172 ataatacacaacatgatgct 58153
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 tgtgctgctggtgctggtgc 368 |||||||||||||||||||| Sbjct: 2050315 tgtgctgctggtgctggtgc 2050296
>gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, complete sequence Length = 168588 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 actatgggagaatttgtact 299 |||||||||||||||||||| Sbjct: 151394 actatgggagaatttgtact 151413
>gb|U17474.1|HSU17474 Human autoantigen mRNA, complete cds Length = 3332 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 587 ccttgcagcagatcactgcc 606
>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129, complete sequence Length = 110487 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcaacccaaagaaaagaggagctt 192 ||||| |||||||||||||||||| Sbjct: 68770 gcaacgcaaagaaaagaggagctt 68747
>emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chromosome 2, complete sequence Length = 184819 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ttccagtttctggcgattat 52 |||||||||||||||||||| Sbjct: 29841 ttccagtttctggcgattat 29860
>gb|L26339.1|HUMAUTANT Human autoantigen mRNA, complete cds Length = 4659 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccttgcagcagatcactgcc 479 |||||||||||||||||||| Sbjct: 1947 ccttgcagcagatcactgcc 1966
>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP region, complete sequence Length = 150681 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaaaatacaggcaacccaaa 178 |||||||||||||||||||| Sbjct: 110433 aaaaatacaggcaacccaaa 110414 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,278,357 Number of Sequences: 3902068 Number of extensions: 6278357 Number of successful extensions: 192821 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 191854 Number of HSP's gapped (non-prelim): 966 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)