>CIDEB_MOUSE (O70303) Cell death activator CIDE-B (Cell death-inducing DFFA-like|
           effector B)
          Length = 219

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +1

Query: 277 QG*SHLLLGAISCRLQEVVEGAGRWKLH 360
           QG  H+LLG IS  L+ VVEGA RW+ H
Sbjct: 186 QGLGHMLLG-ISSTLRHVVEGADRWQWH 212

>REV_HV1Y2 (P35960) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -3

Query: 510 KKLSSWLVNGHNSTPXNPVP-SLPXADHFILPKVNSCGFEINLASSEPCSMVKLPP 346
           + +S WL++ +   P  PVP  LP  +   L     CG         P  +V+ PP
Sbjct: 53  RSISGWLLSNYLGRPTEPVPFQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPP 108

>NUPL2_PONPY (Q5RB98) Nucleoporin-like 2|
          Length = 423

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 309 KLPPSGSCRRGWPVEASPWSTVPMTQG*SQNHKNLPWEG*NGRXXEGLAQGXLESSCGHS 488
           +L PSG+ RRGW   +  +S V  +   S   K+ PW G   R  E  + G  +S    +
Sbjct: 36  QLQPSGNNRRGWNTTSQRYSNVIQS---SSFSKSTPWGG--SRDQEKPSFGSFDSGASTN 90

Query: 489 R 491
           R
Sbjct: 91  R 91

>NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)|
          Length = 420

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +3

Query: 315 PPSGSCRRGWPVEASPWSTVPMTQG*SQNHKNLPWEG*NGRXXEGLAQGXLESSCGHSR 491
           PPSG+ RRGW   +  +S V      S   K+ PW G   R  +    G  +S    SR
Sbjct: 40  PPSGNNRRGWNASSQRYSNVIQP---SSFPKSTPWGG--SRDQDKPPFGSFDSGASTSR 93

>NUP43_HUMAN (Q8NFH3) Nucleoporin Nup43 (p42)|
          Length = 380

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 430 FHPSQGKFLWF*DQPCVIGTVLHGEASTGQPLRQLPEGGSLSHPAGDVITLADHS*ANHS 251
           FHPS  + L+   +    G++ H +AST      +PE  SL H  G   T   HS +N +
Sbjct: 269 FHPSNPEHLFTCSED---GSLWHWDAST-----DVPEKSSLFHQGGRSSTFLSHSISNQA 320


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,421,225
Number of Sequences: 219361
Number of extensions: 1506275
Number of successful extensions: 2972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)