>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
             sequence
          Length = 166888

 Score =  143 bits (72), Expect = 5e-31
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                         
Query: 267   acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 326
             ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 79880 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 79939

                                                 
Query: 327   aggttcactccaacgcctagaaccaacatcaggatg 362
             ||| |||| |||||||||||| ||||||||||||||
Sbjct: 79940 aggctcaccccaacgcctagatccaacatcaggatg 79975

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 5e-31
 Identities = 90/96 (93%)
 Strand = Plus / Minus

                                                                            
Query: 267      acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 326
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 33585200 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 33585141

                                                    
Query: 327      aggttcactccaacgcctagaaccaacatcaggatg 362
                ||| |||| |||||||||||| ||||||||||||||
Sbjct: 33585140 aggctcaccccaacgcctagatccaacatcaggatg 33585105

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 5e-31
 Identities = 90/96 (93%)
 Strand = Plus / Minus

                                                                            
Query: 267      acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 326
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 33675672 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 33675613

                                                    
Query: 327      aggttcactccaacgcctagaaccaacatcaggatg 362
                ||| |||| |||||||||||| ||||||||||||||
Sbjct: 33675612 aggctcaccccaacgcctagatccaacatcaggatg 33675577

>dbj|AK071374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B03, full
           insert sequence
          Length = 1957

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                       
Query: 271 acagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggt 330
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 839 acagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagcaggc 780

                                           
Query: 331 tcactccaacgcctagaaccaacatcaggatg 362
           |||| |||||||||||| ||||||||||||||
Sbjct: 779 tcaccccaacgcctagatccaacatcaggatg 748

>dbj|AK060622.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D10, full
           insert sequence
          Length = 1398

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                       
Query: 271 acagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggt 330
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 269 acagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagcaggc 210

                                           
Query: 331 tcactccaacgcctagaaccaacatcaggatg 362
           |||| |||||||||||| ||||||||||||||
Sbjct: 209 tcaccccaacgcctagatccaacatcaggatg 178

>gb|U81960.1|ZMU81960 Zea mays kinase associated protein phosphatase (KAPP) mRNA,
           complete cds
          Length = 2072

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 283 gatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggttcactccaacgc 342
           |||||| |||| || || |||||||||||||  |||||||| |||||||||| |||| ||
Sbjct: 879 gatgaagtccctagagttataatatcaccatgtgcaagttcagcaggttcaccccaatgc 820

                
Query: 343 ctaga 347
           |||||
Sbjct: 819 ctaga 815

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 85/106 (80%)
 Strand = Plus / Minus

                                                                           
Query: 267     acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 326
               ||||||||||| |||||||||| | || || || ||||| |||||||| || ||||| ||
Sbjct: 6087684 acttacagatagttttgatgaagttcctagagttataatgtcaccatctgctagttcagc 6087625

                                                             
Query: 327     aggttcactccaacgcctagaaccaacatcaggatgggcaactgcc 372
                || |||| |||  |||| || |||||||  ||||||  |||||||
Sbjct: 6087624 tggctcaccccagtgcctggacccaacatttggatggtgaactgcc 6087579

>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 85/106 (80%)
 Strand = Plus / Minus

                                                                          
Query: 267    acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 326
              ||||||||||| |||||||||| | || || || ||||| |||||||| || ||||| ||
Sbjct: 142854 acttacagatagttttgatgaagttcctagagttataatgtcaccatctgctagttcagc 142795

                                                            
Query: 327    aggttcactccaacgcctagaaccaacatcaggatgggcaactgcc 372
               || |||| |||  |||| || |||||||  ||||||  |||||||
Sbjct: 142794 tggctcaccccagtgcctggacccaacatttggatggtgaactgcc 142749

>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence
          Length = 173003

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    acatatctgagtatgtgtata 87
             |||||||||||||||||||||
Sbjct: 76065 acatatctgagtatgtgtata 76085

>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170799

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    gataacataaaaattaagcca 261
              |||||||||||||||||||||
Sbjct: 105460 gataacataaaaattaagcca 105440

>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179223

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    gataacataaaaattaagcca 261
              |||||||||||||||||||||
Sbjct: 160624 gataacataaaaattaagcca 160604

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 314     cagcaagttcggcaggttcac 334
               |||||||||||||||||||||
Sbjct: 3628416 cagcaagttcggcaggttcac 3628396

>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
              sequence
          Length = 223059

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    ataacataaaaattaagccac 262
              |||||||||||||||||||||
Sbjct: 109809 ataacataaaaattaagccac 109829

>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
              complete sequence
          Length = 178320

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 226    atgtttcatgctaatgataacata 249
              |||||||||||||||| |||||||
Sbjct: 145255 atgtttcatgctaatggtaacata 145232

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    catcagcaagttcggcaggttcac 334
              |||||||| |||||||||||||||
Sbjct: 740514 catcagcatgttcggcaggttcac 740537

>gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome 12, complete sequence
          Length = 219729

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     taacaaaaaatataactgca 61
              ||||||||||||||||||||
Sbjct: 146090 taacaaaaaatataactgca 146071

>emb|CR339048.12| Zebrafish DNA sequence from clone DKEY-27L15 in linkage group 17,
              complete sequence
          Length = 128760

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aatgttaaaacaggttggca 21
              ||||||||||||||||||||
Sbjct: 114089 aatgttaaaacaggttggca 114070

>ref|XM_725584.1| Plasmodium yoelii yoelii str. 17XNL cir2 protein (PY02757) partial
           mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 taatgataacataaaaatta 256
           ||||||||||||||||||||
Sbjct: 126 taatgataacataaaaatta 145

>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence
          Length = 95097

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  aatatcaccatcagcaagtt 322
            ||||||||||||||||||||
Sbjct: 8371 aatatcaccatcagcaagtt 8390

>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence
          Length = 129008

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  taatatcaccatcagcaagt 321
            ||||||||||||||||||||
Sbjct: 4814 taatatcaccatcagcaagt 4833

>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence
          Length = 96907

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   taatatcaccatcagcaagt 321
             ||||||||||||||||||||
Sbjct: 66227 taatatcaccatcagcaagt 66208

>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence
          Length = 155092

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aatcggtaacaaaaaatata 55
             ||||||||||||||||||||
Sbjct: 47101 aatcggtaacaaaaaatata 47120

>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   atacttttgatgaactccca 294
             ||||||||||||||||||||
Sbjct: 60627 atacttttgatgaactccca 60646

>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  taatatcaccatcagcaagt 321
            ||||||||||||||||||||
Sbjct: 1804 taatatcaccatcagcaagt 1785

>gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, complete sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gctaatgataacataaaaat 254
             ||||||||||||||||||||
Sbjct: 66336 gctaatgataacataaaaat 66317

>gb|AC018437.10| Homo sapiens chromosome 8, clone RP11-77B22, complete sequence
          Length = 192586

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    caaaaaatataactgcataa 64
             ||||||||||||||||||||
Sbjct: 95230 caaaaaatataactgcataa 95211

>gb|AC116574.6| Mus musculus BAC clone RP23-234F20 from chromosome 12, complete
             sequence
          Length = 191808

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    taacaaaaaatataactgca 61
             ||||||||||||||||||||
Sbjct: 73530 taacaaaaaatataactgca 73511

>emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 in linkage group 19,
              complete sequence
          Length = 193921

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    taatgataacataaaaatta 256
              ||||||||||||||||||||
Sbjct: 185850 taatgataacataaaaatta 185869

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     atttatgtatagacaaatgc 122
               ||||||||||||||||||||
Sbjct: 2132755 atttatgtatagacaaatgc 2132736

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 226      atgtttcatgctaatgataacata 249
                |||||||||||||||| |||||||
Sbjct: 12594501 atgtttcatgctaatggtaacata 12594524

>gb|AE009689.1| Brucella melitensis 16M chromosome II, section 51 of 107 of the
            complete sequence
          Length = 11562

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 311  catcagcaagttcggcaggttcac 334
            |||||||| |||||||||||||||
Sbjct: 3014 catcagcatgttcggcaggttcac 2991

>gb|AC092698.11| Homo sapiens chromosome 8, clone RP11-813M16, complete sequence
          Length = 110085

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ataactgcataatgacatat 72
             ||||||||||||||||||||
Sbjct: 67487 ataactgcataatgacatat 67468

>dbj|AP005540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0092N05
          Length = 120667

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   atgtttcatgctaatgataacata 249
             |||||||||||||||| |||||||
Sbjct: 99514 atgtttcatgctaatggtaacata 99537

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     atttatgtatagacaaatgc 122
               ||||||||||||||||||||
Sbjct: 2132699 atttatgtatagacaaatgc 2132680

>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   atttatgtatagacaaatgc 122
             ||||||||||||||||||||
Sbjct: 14979 atttatgtatagacaaatgc 14960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,552,954
Number of Sequences: 3902068
Number of extensions: 3552954
Number of successful extensions: 65329
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65190
Number of HSP's gapped (non-prelim): 139
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)