| Clone Name | rbaal41l04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase (Xantha-l) gene, complete cds Length = 2097 Score = 662 bits (334), Expect = 0.0 Identities = 346/352 (98%) Strand = Plus / Minus Query: 1 cctgtgctcatttagagactctcgaggagcatgatgcatcattatgtttgtaaagatagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2052 cctgtgctcatttagagactctcgaggagcatgatgcatcattatgtttgtaaagatagg 1993 Query: 61 cagagatgaatcctttttcgacaaattcagtagacaagcttgggctcaaattcggcaaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1992 cagagatgaatcctttttcgacaaattcagtagacaagcttgggctcaaattcggcaaaa 1933 Query: 121 tcaacggagccagactcgattgggggcatgaggtacgcagcgatgatctcagacactagt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1932 tcaacggagccagactcgattgggggcatgaggtacgcagcgatgatctcagacactagt 1873 Query: 181 tgggcaataagaggaaccctnttcaggttcttnaccaggggcaagtcgntggactctcct 240 |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1872 tgggcaataagaggaaccctcttcaggttcttcaccaggggcaagtcgttggactctcct 1813 Query: 241 atagaaatgatcttcaggttgatatctaccatnctgtctaacttcctcttgaattcaggg 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1812 atagaaatgatcttcaggttgatatctaccatcctgtctaacttcctcttgaattcaggg 1753 Query: 301 ttctcaacatccggtacagcagggaagatcctcgccgtngtgcggntggtct 352 |||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1752 ttctcaacatccggtacagcagggaagatcctcgccgttgtgcggttggtct 1701
>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA Length = 1227 Score = 216 bits (109), Expect = 4e-53 Identities = 249/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 1227 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1168 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 1167 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1108 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 1107 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1048 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 1047 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 988 Query: 327 gatcctcgccgtngtgcggntggtctcatanatgacatgcatgtntgaattctttgg 383 ||||| || || |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 987 aatccttgctgttgtgcggttggtctcaattatcacatgcatgtc-gaattctttgg 932
>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full insert sequence Length = 1691 Score = 216 bits (109), Expect = 4e-53 Identities = 249/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 1275 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1216 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 1215 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1156 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 1155 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1096 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 1095 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 1036 Query: 327 gatcctcgccgtngtgcggntggtctcatanatgacatgcatgtntgaattctttgg 383 ||||| || || |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 1035 aatccttgctgttgtgcggttggtctcaattatcacatgcatgtc-gaattctttgg 980
>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full insert sequence Length = 618 Score = 216 bits (109), Expect = 4e-53 Identities = 249/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 350 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 291 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 290 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 231 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 230 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 171 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 170 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 111 Query: 327 gatcctcgccgtngtgcggntggtctcatanatgacatgcatgtntgaattctttgg 383 ||||| || || |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 110 aatccttgctgttgtgcggttggtctcaattatcacatgcatgtc-gaattctttgg 55
>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full insert sequence Length = 1944 Score = 216 bits (109), Expect = 4e-53 Identities = 249/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 1265 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1206 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 1205 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1146 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 1145 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1086 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 1085 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 1026 Query: 327 gatcctcgccgtngtgcggntggtctcatanatgacatgcatgtntgaattctttgg 383 ||||| || || |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 1025 aatccttgctgttgtgcggttggtctcaattatcacatgcatgtc-gaattctttgg 970
>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full insert sequence Length = 1533 Score = 216 bits (109), Expect = 4e-53 Identities = 249/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 1261 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1202 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 1201 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1142 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 1141 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1082 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 1081 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 1022 Query: 327 gatcctcgccgtngtgcggntggtctcatanatgacatgcatgtntgaattctttgg 383 ||||| || || |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 1021 aatccttgctgttgtgcggttggtctcaattatcacatgcatgtc-gaattctttgg 966
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 206 bits (104), Expect = 4e-50 Identities = 224/266 (84%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 9875240 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 9875181 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 9875180 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 9875121 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 9875120 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 9875061 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 9875060 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 9875001 Query: 327 gatcctcgccgtngtgcggntggtct 352 ||||| || || |||||| |||||| Sbjct: 9875000 aatccttgctgttgtgcggttggtct 9874975
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 206 bits (104), Expect = 4e-50 Identities = 224/266 (84%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 139490 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 139431 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 139430 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 139371 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 139370 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 139311 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 139310 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 139251 Query: 327 gatcctcgccgtngtgcggntggtct 352 ||||| || || |||||| |||||| Sbjct: 139250 aatccttgctgttgtgcggttggtct 139225
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 206 bits (104), Expect = 4e-50 Identities = 224/266 (84%) Strand = Plus / Minus Query: 87 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 146 |||||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 11006 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 10947 Query: 147 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctnttcag 206 ||||||||||||||| |||||||||||||| || ||||| |||||| ||| ||||| Sbjct: 10946 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 10887 Query: 207 gttcttnaccaggggcaagtcgntggactctcctatagaaatgatcttcaggttgatatc 266 |||||| |||||||| | ||| ||||| ||||| | ||||||||| |||||| || Sbjct: 10886 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 10827 Query: 267 taccatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||| |||||||||||||||||||||||||||||||| || || | ||||| ||||| Sbjct: 10826 caccatcctgtctaacttcctcttgaattcagggttctcgacgtcaagaacagcggggaa 10767 Query: 327 gatcctcgccgtngtgcggntggtct 352 ||||| || || |||||| |||||| Sbjct: 10766 aatccttgctgttgtgcggttggtct 10741
>gb|AY108897.1| Zea mays PCO080076 mRNA sequence Length = 1774 Score = 194 bits (98), Expect = 1e-46 Identities = 212/252 (84%) Strand = Plus / Minus Query: 102 gggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagc 161 ||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || || Sbjct: 1251 gggctcaaattcggcgaaatcaaccgagccagactcgatggggggcatgaggtaggcggc 1192 Query: 162 gatgatctcagacactagttgggcaataagaggaaccctnttcaggttcttnaccagggg 221 ||||||||| ||||| || ||| | |||||||| ||| ||||||||||| || ||||| Sbjct: 1191 gatgatctcggacaccagagaggcgacaagaggaatcctcttcaggttcttcactagggg 1132 Query: 222 caagtcgntggactctcctatagaaatgatcttcaggttgatatctaccatnctgtctaa 281 | ||| ||||||||| | | |||||||||| ||||||| || ||||| ||||| | Sbjct: 1131 gatttcgtcggactctccgacggcaatgatcttctggttgatctcaaccatcctgtcaag 1072 Query: 282 cttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngt 341 |||||||||||| || |||||||| || || | ||||||||||||||||||||||| || Sbjct: 1071 cttcctcttgaactctgggttctcgacgtctaggacagcagggaagatcctcgccgttgt 1012 Query: 342 gcggntggtctc 353 |||| ||||||| Sbjct: 1011 gcggttggtctc 1000
>gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence Length = 1416 Score = 93.7 bits (47), Expect = 4e-16 Identities = 88/103 (85%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaag 327 ||||| ||||| ||||||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1063 accatcctgtccaacttcctcttgaattctgggttctcaacatcaaggacagcagggaaa 1004 Query: 328 atcctcgccgtngtgcggntggtctcatanatgacatgcatgt 370 ||||| || || |||||| | |||||| ||||||||||||| Sbjct: 1003 atccttgcagttgtgcggtttgtctcaatgatgacatgcatgt 961
>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds Length = 1323 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/103 (84%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaag 327 ||||| ||||| ||||||||||||||||| ||||||||||| || | ||||||||||| Sbjct: 945 accatcctgtccaacttcctcttgaattctgggttctcaacgtcaaggacagcagggaaa 886 Query: 328 atcctcgccgtngtgcggntggtctcatanatgacatgcatgt 370 ||||| || || |||||| | |||||| ||||||||||||| Sbjct: 885 atccttgctgttgtgcggtttgtctcaatgatgacatgcatgt 843
>gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZIP mRNA, partial cds Length = 999 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/88 (84%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | ||||| |||||||| || ||||| || Sbjct: 818 ttcctcttgaactcagggttctcaacatccagcacagccgggaagattcttgccgtggtt 759 Query: 343 cggntggtctcatanatgacatgcatgt 370 ||| | |||||| ||||| ||||||| Sbjct: 758 cggtttgtctcaatgatgacgtgcatgt 731
>gb|AY322554.1| Salix babylonica putative fatty acid desaturase SBZIP mRNA, partial cds Length = 999 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/88 (84%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | ||||| |||||||| || ||||| || Sbjct: 818 ttcctcttgaactcagggttctcaacatccagcacagccgggaagattcttgccgtggtt 759 Query: 343 cggntggtctcatanatgacatgcatgt 370 ||| | |||||| ||||| ||||||| Sbjct: 758 cggtttgtctcaatgatgacgtgcatgt 731
>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds Length = 1403 Score = 69.9 bits (35), Expect = 6e-09 Identities = 55/62 (88%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaag 327 ||||| ||||| |||||||||||||| || |||||||||||||| | |||||||||||| Sbjct: 1048 accatcctgtccaacttcctcttgaactccgggttctcaacatcaagcacagcagggaag 989 Query: 328 at 329 || Sbjct: 988 at 987
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence Length = 96930 Score = 63.9 bits (32), Expect = 4e-07 Identities = 66/78 (84%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaag 327 ||||| ||||| |||||||||||||| || |||||||| ||||| | ||||| |||||| Sbjct: 95761 accatcctgtccaacttcctcttgaactctgggttctctacatcaagcacagctgggaag 95702 Query: 328 atcctcgccgtngtgcgg 345 || ||||| || |||||| Sbjct: 95701 attctcgctgtggtgcgg 95684 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 89 agtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggca 148 |||| ||||| || || ||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 95940 agtaaacaagttttggttcaaactctgcaaaatcaacagatccagactcgattggtggca 95881 Query: 149 t 149 | Sbjct: 95880 t 95880
>gb|AY322553.1| Spinacia oleracea putative fatty acid desaturase SOZIP mRNA, partial cds Length = 903 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgt 338 ||||||||||| |||||||||||||||||| | ||||| |||||||| || ||||| Sbjct: 722 ttcctcttgaactcagggttctcaacatccagcacagccgggaagattcttgccgt 667
>gb|AY456957.2| Gossypium hirsutum putative leucine zipper protein (ZIP) mRNA, partial cds Length = 1411 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/112 (81%) Strand = Plus / Minus Query: 259 ttgatatctaccatnctgtctaacttcctcttgaattcagggttctcaacatccggtaca 318 ||||| || ||||| |||| ||| |||||||||| || || ||||| |||||| | ||| Sbjct: 1104 ttgatctcaaccattttgtccaacctcctcttgaactctggattctccacatccagcaca 1045 Query: 319 gcagggaagatcctcgccgtngtgcggntggtctcatanatgacatgcatgt 370 |||||||| ||||| || || |||||| | |||||| ||||||||||||| Sbjct: 1044 gcagggaaaatcctggctgttgtgcggtttgtctcaatgatgacatgcatgt 993
>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds Length = 1481 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 1222 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1281 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 1282 agataagcagccaagatctcaga 1304 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||||||||| |||||||||||||||||| | || |||||||| Sbjct: 1414 ttcctcttgaactcagggttctcaacatccagcaccgcagggaa 1457
>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103) mRNA, complete cds Length = 1602 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 1275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1216 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 1215 agataagcagccaagatctcaga 1193 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | || |||||||| || || ||||| || Sbjct: 1083 ttcctcttgaactcagggttctcaacatccagcaccgcagggaatattcttgccgtggtt 1024 Query: 343 cggntggtctcatanatgacatgcat 368 ||| | ||||| ||||||||||| Sbjct: 1023 cggtttgtctcgatgatgacatgcat 998
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16 Length = 107271 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 94188 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 94129 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 94128 agataagcagccaagatctcaga 94106 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||||||||| |||||||||||||||||| | || |||||||| Sbjct: 93996 ttcctcttgaactcagggttctcaacatccagcaccgcagggaa 93953
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 6275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 6216 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 6215 agataagcagccaagatctcaga 6193 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaa 326 ||||||||||| |||||||||||||||||| | || |||||||| Sbjct: 6083 ttcctcttgaactcagggttctcaacatccagcaccgcagggaa 6040
>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1) mRNA, complete cds Length = 1407 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 1265 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1206 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 1205 agataagcagccaagatctcaga 1183 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | || |||||||| || || ||||| || Sbjct: 1073 ttcctcttgaactcagggttctcaacatccagcaccgcagggaatattcttgccgtggtt 1014 Query: 343 cggntggtctcatanatgacatgcat 368 ||| | ||||| ||||||||||| Sbjct: 1013 cggtttgtctcgatgatgacatgcat 988
>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds Length = 1349 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 91 tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 150 |||||||| || |||||||| ||||| |||||||| ||||||||||| | || |||||| Sbjct: 1241 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1182 Query: 151 aggtacgcagcgatgatctcaga 173 || || ||||| | ||||||||| Sbjct: 1181 agataagcagccaagatctcaga 1159 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | || |||||||| || || ||||| || Sbjct: 1049 ttcctcttgaactcagggttctcaacatccagcaccgcagggaatattcttgccgtggtt 990 Query: 343 cggntggtctcatanatgacatgcat 368 ||| | ||||| ||||||||||| Sbjct: 989 cggtttgtctcgatgatgacatgcat 964
>gb|AY322556.1| Brassica napus putative fatty acid desaturase BNZIP mRNA, partial cds Length = 924 Score = 60.0 bits (30), Expect = 6e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatcc 312 ||||| || |||| |||||||||||| |||||||||||||||||| Sbjct: 737 accattctatctagcttcctcttgaactcagggttctcaacatcc 693
>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA, partial cds Length = 903 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ttcctcttgaattcagggttctcaacatccggtacagcagggaagatcctcgccgtngtg 342 ||||||||||| |||||||||||||||||| | || |||||||| || || ||||| || Sbjct: 722 ttcctcttgaactcagggttctcaacatccagcaccgcagggaatattcttgccgtggtt 663 Query: 343 cggntggtctcatanatgacatgcat 368 ||| | ||||| ||||||||||| Sbjct: 662 cggtttgtctcgatgatgacatgcat 637 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 103 ggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagcg 162 ||||| |||||||| |||||||| ||||||||||| | || |||||||| || ||||| Sbjct: 902 ggctcgaattcggcgaaatcaacagagccagactcaacaggaggcatgagataagcagcc 843 Query: 163 atgatctcag 172 | |||||||| Sbjct: 842 aagatctcag 833
>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds Length = 5083 Score = 52.0 bits (26), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 268 accatnctgtctaacttcctcttgaattc 296 ||||| ||||||||||||||||||||||| Sbjct: 1797 accatcctgtctaacttcctcttgaattc 1825 Score = 48.1 bits (24), Expect = 0.021 Identities = 32/35 (91%) Strand = Plus / Minus Query: 268 accatnctgtctaacttcctcttgaattcagggtt 302 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 4560 accattctgtccaacttcctcttgaattccgggtt 4526
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence Length = 142659 Score = 44.1 bits (22), Expect = 0.33 Identities = 54/65 (83%) Strand = Plus / Plus Query: 268 accatnctgtctaacttcctcttgaattcagggttctcaacatccggtacagcagggaag 327 ||||| | ||| ||||| ||||| || || |||||||||||||| ||||||| ||||| Sbjct: 20071 accatccggtccaactttctcttaaactctgggttctcaacatcaagtacagctgggaaa 20130 Query: 328 atcct 332 ||||| Sbjct: 20131 atcct 20135
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete sequence Length = 155911 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ctctcctatagaaatgatctt 254 ||||||||||||||||||||| Sbjct: 56233 ctctcctatagaaatgatctt 56253
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ctctcctatagaaatgatctt 254 ||||||||||||||||||||| Sbjct: 425 ctctcctatagaaatgatctt 405
>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence Length = 148689 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ctctcctatagaaatgatctt 254 ||||||||||||||||||||| Sbjct: 98032 ctctcctatagaaatgatctt 98052
>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete sequence Length = 194140 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 agtagacaagcttgggctcaaattc 113 ||||||||||||||| ||||||||| Sbjct: 149100 agtagacaagcttggtctcaaattc 149076
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tcctatagaaatgatcttca 256 |||||||||||||||||||| Sbjct: 81049 tcctatagaaatgatcttca 81030
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atgcatcattatgtttgtaa 53 |||||||||||||||||||| Sbjct: 100909 atgcatcattatgtttgtaa 100890
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atgcatcattatgtttgtaa 53 |||||||||||||||||||| Sbjct: 1404 atgcatcattatgtttgtaa 1385
>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3 Contains the 3' end of the SUMO-1-specific protease (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI (DFNA22 KIAA0389) and one CpG island, complete sequence Length = 121764 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gagcatgatgcatcattatg 46 |||||||||||||||||||| Sbjct: 43566 gagcatgatgcatcattatg 43585
>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12, complete sequence Length = 65237 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ctatagaaatgatcttcagg 258 |||||||||||||||||||| Sbjct: 58039 ctatagaaatgatcttcagg 58058
>emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 in linkage group 9, complete sequence Length = 237498 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ggtacagcagggaagatcct 332 |||||||||||||||||||| Sbjct: 126203 ggtacagcagggaagatcct 126222
>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence Length = 206648 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gtaaagataggcagagatga 69 |||||||||||||||||||| Sbjct: 141296 gtaaagataggcagagatga 141277
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence Length = 181174 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgtaaagataggcagagatg 68 |||||||||||||||||||| Sbjct: 95539 tgtaaagataggcagagatg 95520
>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete sequence Length = 151924 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 agacaagcttgggctcaaat 111 |||||||||||||||||||| Sbjct: 64006 agacaagcttgggctcaaat 64025
>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full insert sequence Length = 634 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tttttcgacaaattcagtag 93 |||||||||||||||||||| Sbjct: 631 tttttcgacaaattcagtag 612
>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete sequences Length = 206624 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ctctcctatagaaatgatct 253 |||||||||||||||||||| Sbjct: 158166 ctctcctatagaaatgatct 158147
>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence Length = 174986 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 atgatgcatcattatgtttg 50 |||||||||||||||||||| Sbjct: 72853 atgatgcatcattatgtttg 72872
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 attcggcaaaatcaacggag 129 |||||||||||||||||||| Sbjct: 3368423 attcggcaaaatcaacggag 3368442
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence Length = 217178 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gtaaagataggcagagatga 69 |||||||||||||||||||| Sbjct: 162669 gtaaagataggcagagatga 162688 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,279,542 Number of Sequences: 3902068 Number of extensions: 2279542 Number of successful extensions: 36637 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36529 Number of HSP's gapped (non-prelim): 91 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)