ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41l02 |
|---|---|
| Clone Library Name | barley_pub |
>MSK1_MEDSA (P51137) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1)| Length = 411 Score = 68.2 bits (165), Expect = 7e-12 Identities = 28/36 (77%), Positives = 33/36 (91%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFVG 307 LPPLFNFKPHELKGVP++ L+KL+PEHARK C F+G Sbjct: 375 LPPLFNFKPHELKGVPVETLMKLVPEHARKQCPFLG 410
>KSG1_ARATH (P43288) Shaggy-related protein kinase alpha (EC 2.7.11.1)| (ASK-alpha) Length = 405 Score = 65.9 bits (159), Expect = 4e-11 Identities = 26/36 (72%), Positives = 33/36 (91%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFVG 307 LPPLFNFKPHELKGVP++++ KL+PEHARK C ++G Sbjct: 369 LPPLFNFKPHELKGVPLEMVAKLVPEHARKQCPWLG 404
>KSG3_ARATH (P43289) Shaggy-related protein kinase gamma (EC 2.7.11.1)| (ASK-gamma) Length = 409 Score = 63.2 bits (152), Expect = 2e-10 Identities = 25/35 (71%), Positives = 32/35 (91%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFV 310 LPPLFNFKPHELKGVP++++ KL+PEHARK C ++ Sbjct: 373 LPPLFNFKPHELKGVPVEMVAKLVPEHARKQCPWL 407
>MSK3_MEDSA (P51139) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1)| Length = 411 Score = 59.7 bits (143), Expect = 3e-09 Identities = 26/36 (72%), Positives = 30/36 (83%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFVG 307 LPPLFNFK +ELKGVP ++LVKL+P HARK CA G Sbjct: 374 LPPLFNFKVNELKGVPAEMLVKLVPPHARKQCALFG 409
>KSG5_ARATH (Q8VZD5) Shaggy-related protein kinase epsilon (EC 2.7.11.1)| (ASK-epsilon) Length = 410 Score = 58.5 bits (140), Expect = 6e-09 Identities = 24/35 (68%), Positives = 30/35 (85%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFV 310 LPPLFNFKP ELKG +++L KLIP+HARK C+F+ Sbjct: 374 LPPLFNFKPQELKGASLELLSKLIPDHARKQCSFL 408
>MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1)| Length = 409 Score = 57.4 bits (137), Expect = 1e-08 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFVG 307 LPPLFNFK HELKGV + L+KL+PEHARK C +G Sbjct: 373 LPPLFNFKAHELKGVSAENLLKLVPEHARKQCPSLG 408
>MSK2_MEDSA (P51138) Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1)| Length = 411 Score = 57.4 bits (137), Expect = 1e-08 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCA 316 LPPLFNFK +ELKGVP ++LVKL+P HARK C+ Sbjct: 374 LPPLFNFKANELKGVPAEMLVKLVPSHARKQCS 406
>KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7.11.1)| (ASK-kappa) (AtK-1) Length = 421 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFV 310 LPPLFNFKP EL G+P +I+ +L+PEHARK F+ Sbjct: 383 LPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFM 417
>KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1)| (ASK-delta) Length = 420 Score = 50.4 bits (119), Expect = 2e-06 Identities = 21/35 (60%), Positives = 27/35 (77%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARKNCAFV 310 LPPLFNFKP EL G+P + + +L+PEHARK F+ Sbjct: 382 LPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFM 416
>KSG2_ARATH (O23145) Shaggy-related protein kinase beta (EC 2.7.11.1)| (ASK-beta) Length = 431 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARK 325 LPPLF+F EL G +++ +LIPEHARK Sbjct: 402 LPPLFDFTAQELAGASVELRHRLIPEHARK 431
>KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.11.1)| (ASK-iota) Length = 407 Score = 39.3 bits (90), Expect = 0.004 Identities = 18/30 (60%), Positives = 23/30 (76%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARK 325 LPPLFNFK EL G M+++ +LIPEH R+ Sbjct: 370 LPPLFNFK-QELGGASMELINRLIPEHVRR 398
>KSG6_ARATH (Q39010) Shaggy-related protein kinase dzeta (EC 2.7.11.1)| (ASK-dzeta) Length = 412 Score = 37.4 bits (85), Expect = 0.014 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHARK 325 LPPLFNFK EL G +++ +LIPEH R+ Sbjct: 372 LPPLFNFK-QELSGASPELINRLIPEHVRR 400
>KSGT_BRANA (O04160) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 468 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHAR 328 LPPLFNF EL G ++ +LIP H + Sbjct: 434 LPPLFNFTAQELAGASTELRQRLIPAHCQ 462
>KSG8_ARATH (Q96287) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 472 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHAR 328 LPPLFNF EL G ++ +LIP H + Sbjct: 438 LPPLFNFTAQELAGASTELRQRLIPAHCQ 466
>GSK3_SCHPO (Q10452) Protein kinase gsk3 (EC 2.7.11.1) (Protein kinaae skp1)| Length = 387 Score = 33.5 bits (75), Expect = 0.20 Identities = 18/29 (62%), Positives = 19/29 (65%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHAR 328 LP LFNF P EL P D+ KLIP HAR Sbjct: 339 LPELFNFSPFELSIRP-DLNQKLIPSHAR 366
>KSG7_ARATH (Q39011) Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta)| (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1) Length = 380 Score = 31.6 bits (70), Expect = 0.76 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -2 Query: 411 PPLFNFKPHELKGVPMDILVKLIPEHARK 325 PPLFNFK E+ G +++ KLIP+H ++ Sbjct: 341 PPLFNFK-QEVAGSSPELVNKLIPDHIKR 368
>SGG_DROME (P18431) Protein kinase shaggy (EC 2.7.11.1) (Protein zeste-white| 3) Length = 1067 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEH 334 +PPLFNF HEL P ++ +L+P+H Sbjct: 908 MPPLFNFTEHELSIQP-SLVPQLLPKH 933
>GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3| alpha) (Factor A) (FA) Length = 483 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -2 Query: 414 LPPLFNFKPHELKGVPMDILVKLIPEHAR 328 LPPLFNF P EL P + LIP H R Sbjct: 419 LPPLFNFSPGELSIQP-SLNAILIPPHLR 446
>REB1_YEAST (P21538) DNA-binding protein REB1 (QBP)| Length = 810 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +2 Query: 59 MSSGENSRNTSHLLTESWVICYIGSRGKERIHDTEVSDKKKNNNH 193 M SG N +N + E V+ Y+G + HD ++ K N H Sbjct: 1 MPSGHNDKNANQESVEEAVLKYVGVGLDHQNHDPQLHTKDLENKH 45
>MYRB_MICGR (P43433) Mycinamicin-resistance protein myrB (EC 2.1.1.-)| Length = 311 Score = 28.9 bits (63), Expect = 4.9 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 123 TSAVGGKKE----YMTPR---SRTRKRIIITCASPISHVAAGNLKLLGFLVDDNRICSEL 281 T AVGG+ E ++ R +R + + T A P+ + AG+ + LV N + L Sbjct: 15 TPAVGGRHELGQNFLVDRGVCTRIAEVVSSTTAHPVLELGAGDGAITRALVAANLPVTAL 74 Query: 282 SFNSRRITTLQR 317 + RR+ LQR Sbjct: 75 ELDPRRVRRLQR 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,442,732 Number of Sequences: 219361 Number of extensions: 1272557 Number of successful extensions: 2705 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2629 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2702 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
