>CT108_HUMAN (Q96KR6) Protein C20orf108|
          Length = 192

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
 Frame = -3

Query: 504 KKSRTDQAKELLGKYGGAYLATSITLSLISFTACYLLINAGVDVQQLLGKIG----IATD 337
           K+S++ Q K++  +YG   ++  I +SLIS    Y+++++GVD+  +L K+G    +   
Sbjct: 82  KQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQS 141

Query: 336 ETGGKVGTFALAYAAHKAASPIRFPPTVALTPVVANWIGKI 214
           +      TF +AYA HK  +P+R   T+   P++  +  K+
Sbjct: 142 KMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKV 182

>CT108_MOUSE (Q9D8B6) Protein C20orf108 homolog|
          Length = 190

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = -3

Query: 504 KKSRTDQAKELLGKYGGAYLATSITLSLISFTACYLLINAGVDVQQLLGKIG----IATD 337
           K SRT Q K++  +YG   ++  I +SL+S    Y ++++G+D+  +L K+G    +   
Sbjct: 80  KLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLGFKESLVQS 139

Query: 336 ETGGKVGTFALAYAAHKAASPIRFPPTVALTPVVANWIGKI 214
           +      TF +AYA HK  +P+R   T+   P V  +   +
Sbjct: 140 KMAAGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRYFRSV 180

>YBL7_SCHPO (Q9URV4) Hypothetical protein C106.07c in chromosome II|
          Length = 167

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
 Frame = -3

Query: 492 TDQAKELLGKYGGAYLATSITLSLISFTACYLLINA------GVDVQQLLGKI------G 349
           T + KEL  KYG   L   I +S++ F+A ++L+        G     +L  I       
Sbjct: 51  TQRVKELTKKYGWWSLGVYIGISVLDFSASFVLVRTLGAERIGYLEHSILNSIRRYFNWE 110

Query: 348 IATDETGGKVGTF--------ALAYAAHKAASPIRFPPTVALTPVVA 232
           I      G+   +        A AY  HKA    R P T A+ P +A
Sbjct: 111 IPESTASGEPEAYHSSIWTELAFAYGIHKALVVARVPLTAAIVPPLA 157

>KAPR_BLUGR (Q9HEP7) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 389

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 393 INAGVDVQQLLGKIG--IATDETGGKVGTFALAYAAHKAASPI 271
           +N    VQ  LG +G  +AT E GG  G  AL Y A +AA+ I
Sbjct: 179 VNPAGSVQPGLGGLGNKVATIEPGGSFGELALMYNAPRAATVI 221

>SYRC_SCHPO (O74781) Probable arginyl-tRNA synthetase, cytoplasmic (EC|
           6.1.1.19) (Arginine--tRNA ligase) (ArgRS)
          Length = 618

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 25  GFVLFYKSSKHPKQVGK-IVLSQIHSHYYRTPKLGVMH-NYQQVHIDRSAYTLLLHQSVA 198
           G  L    SKH K++GK IV  +  +  Y T  +G  +  Y++   D+S Y +   Q + 
Sbjct: 331 GGALLIDLSKHDKKLGKAIVQKRDGTTLYLTRDIGTAYKRYEKYKFDKSIYVVSSQQDMY 390

Query: 199 FASL 210
           F+ L
Sbjct: 391 FSQL 394

>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor|
            protein 550) (AKAP 550) (dAKAP550)
          Length = 3584

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +1

Query: 52   KHPKQVGKIVLSQIHSHYYRTPKLG-VMHNYQQVHIDRSAYTLLLHQSVAFASLGDLPYP 228
            +H +Q  +    Q   HYY+  +   V+HN+   H+  + Y    HQ VA       P P
Sbjct: 2010 QHQQQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTP 2069

Query: 229  VGDH 240
            +  H
Sbjct: 2070 LATH 2073

>NTG1_YEAST (P31378) DNA base excision repair N-glycosylase 1, mitochondrial|
           precursor
          Length = 399

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 356 LPSSCWTSTPALMRR*HAVKEMSESVIEVARYAPPYLPRSSLAWSV 493
           LP   WT    L+     +   S ++ ++ ++ PP  PRSSL W +
Sbjct: 294 LPKGLWTEINGLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDL 339

>KAMA_BACSU (O34676) L-lysine 2,3-aminomutase (EC 5.4.3.2) (KAM) (LAM)|
          Length = 471

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query: 492 TDQAKELLGKYGGAYLAT----SITLSLISFTACYLLINAGVDV 373
           TD   E+L KY   +L T    SI ++  S  AC  L+NAGV V
Sbjct: 221 TDHLCEILKKYHPVWLNTHFNTSIEMTEESVEACEKLVNAGVPV 264

>ZN645_MACFA (Q4R361) Zinc finger protein 645|
          Length = 422

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +2

Query: 194 SPSPPLAIFPIQLATTGVSATVGGNLIGDXXXXXXXXXXNVPTLPPV--SSVAIPILPSS 367
           SPSPP   FPIQ  T  V     GNLI D            P+ P       + P++ S 
Sbjct: 213 SPSPP---FPIQWETVSVFTRKHGNLIVDHIQNNSDSGAKKPSPPDYYPEYQSQPVVSSP 269

Query: 368 C 370
           C
Sbjct: 270 C 270


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,097,922
Number of Sequences: 219361
Number of extensions: 1149025
Number of successful extensions: 3960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3897
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)