ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41j20 |
|---|---|
| Clone Library Name | barley_pub |
>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (E29) Length = 414 Score = 152 bits (383), Expect = 9e-37 Identities = 75/96 (78%), Positives = 83/96 (86%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 IEGPQL+Q+G NDAIAKVGLTKFV+DLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLK Sbjct: 304 IEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLK 363 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 293 R GNKI+TQTGIGTC+AIAGVAIYS+ Sbjct: 364 RVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSF 399
>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 409 Score = 149 bits (376), Expect = 6e-36 Identities = 76/95 (80%), Positives = 82/95 (86%) Frame = -3 Query: 577 EGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKR 398 EGP+LMQ+G +DAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKR Sbjct: 301 EGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKR 360 Query: 397 XXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 293 GNKI+TQTGIGT +AIAGVA+YSY Sbjct: 361 VFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSY 395
>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E29) Length = 404 Score = 144 bits (362), Expect = 2e-34 Identities = 71/95 (74%), Positives = 80/95 (84%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 +EGPQLM++G NDAIAKVGLTKF+SDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLK Sbjct: 294 VEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 353 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 R GNKI+TQT IGT +AIAGVA+YS Sbjct: 354 RVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYS 388
>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 143 bits (360), Expect = 4e-34 Identities = 70/95 (73%), Positives = 81/95 (85%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 +EGPQL+++G NDAIAKVG+TKF+SDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLK Sbjct: 297 VEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 356 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 R GNKI+TQTGIGT +AIAGVA+YS Sbjct: 357 RVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYS 391
>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E30) Length = 402 Score = 140 bits (353), Expect = 3e-33 Identities = 71/96 (73%), Positives = 79/96 (82%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 IEGP L++ G NDAIAKVGL KFVSDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLK Sbjct: 292 IEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLK 351 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 293 R GNKI+TQTGIGT +AIAGVA+YS+ Sbjct: 352 RVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSF 387
>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 139 bits (351), Expect = 5e-33 Identities = 70/94 (74%), Positives = 78/94 (82%) Frame = -3 Query: 577 EGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKR 398 EGPQL+++G NDAIAKVG+ KF+SDLF VG+FYHLYNQIATNTLERVAPLTHAVGNVLKR Sbjct: 298 EGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKR 357 Query: 397 XXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 GNKI+TQT IGT +AIAGVAIYS Sbjct: 358 VFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYS 391
>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 408 Score = 137 bits (345), Expect = 2e-32 Identities = 67/95 (70%), Positives = 79/95 (83%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 +EGPQL+++G +DAIAKVG+TKF+SDLF VG+FYHLYNQ+A NTLERVAPLTHAVGNVLK Sbjct: 298 LEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLK 357 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 R GNKI+TQT IGT +AIAGVA+YS Sbjct: 358 RVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYS 392
>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast| precursor Length = 388 Score = 64.7 bits (156), Expect = 2e-10 Identities = 33/95 (34%), Positives = 52/95 (54%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 +EGPQ+ G A+A VG +FV + +FYHLYNQ++ +L++++PLT +VGN +K Sbjct: 291 VEGPQMWVDGWQTALATVG-PQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMK 349 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 R + +G +AI G +YS Sbjct: 350 RISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYS 384
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 62.0 bits (149), Expect = 1e-09 Identities = 31/95 (32%), Positives = 52/95 (54%) Frame = -3 Query: 580 IEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLK 401 +E PQ+ G +A+++VG FV + +FYHLYNQ++ +L++++PLT ++GN +K Sbjct: 291 VEVPQMWAAGWQNAVSQVG-PNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMK 349 Query: 400 RXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 296 R I +G +AI G +YS Sbjct: 350 RISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYS 384
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 51.6 bits (122), Expect = 2e-06 Identities = 25/80 (31%), Positives = 41/80 (51%) Frame = -3 Query: 535 AKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRXXXXXXXXXXXGNK 356 A V + + + + L +H Y Q++ L RV+P+TH+VGN +KR Sbjct: 311 AGVNVQQIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTP 370 Query: 355 ITTQTGIGTCVAIAGVAIYS 296 ++ GT +A+AGV +YS Sbjct: 371 VSPVNAFGTGIALAGVFLYS 390
>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)| Length = 549 Score = 30.8 bits (68), Expect = 3.0 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 8/111 (7%) Frame = +2 Query: 113 STSQGNTLADN*KTKNK*RRSDSSMSSPGQCSTGNHQTIFTAVTSSRSLRPFLFLDLSFD 292 S + NTLA K N R S+ ++ PG+ + Q I+T + +SL +L +D+S Sbjct: 60 SINNYNTLASAGKNNNNKRASNDNLLIPGE--NAHKQKIYTKDENLKSL--YLDIDVSVA 115 Query: 293 VRVDG--------NTSYCNASSDSSLCGNFVAKNDDRETNDENPFQHIANS 421 + NT+ ++++ ++ N + RE+N +P + +S Sbjct: 116 KALSSSATAPKLINTARTSSTTTATTSNNILTSPSYRESNYSSPSSYSFSS 166
>RPH1_YEAST (P39956) DNA damage-responsive transcriptional repressor RPH1| Length = 796 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 338 SSLCGNFVAKNDDRETNDENPFQHIANSMCQRGHPLQSVCSNLIIEMVEQSHQE 499 +S+ G ND + + E P AN + ++ P+++ SNLI+ V + QE Sbjct: 619 TSVLGPLSDTNDIKTPHPERPNHKTANRILKKESPVETSKSNLILSKVASTRQE 672
>PCSK5_HUMAN (Q92824) Proprotein convertase subtilisin/kexin type 5 precursor| (EC 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (hPC6) Length = 913 Score = 30.4 bits (67), Expect = 3.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 554 WIKRCNCKSRSDKICIRSFPGGIVLP 477 W RC C R D +C+ + GG +LP Sbjct: 3 WESRCCCPGRLDLLCVLALLGGCLLP 28
>OTC_YEAST (P05150) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| (Ornithine transcarbamylase) Length = 338 Score = 29.3 bits (64), Expect = 8.6 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 410 IANSMCQRGHPLQSVCSNLII 472 I NS+C + HPLQ++C L I Sbjct: 136 IINSLCDKFHPLQAICDLLTI 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,341,300 Number of Sequences: 219361 Number of extensions: 1622458 Number of successful extensions: 4215 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4095 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4209 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
