| Clone Name | rbaal41j07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2055 Score = 291 bits (147), Expect = 1e-75 Identities = 297/347 (85%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagct 252 |||||| ||||||||||||||||| ||| |||| ||||||||| |||||||| |||||| Sbjct: 1689 gacttgatgtccatgccaaaaatcgttgatcctaatgttggcagtaagactgtcagagct 1630 Query: 253 gcaactccgacaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtgg 312 |||| | |||| || |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 1629 gcaatggcaacaattttcaggggcaacccagtggccaccagatccttgatggtaatgtag 1570 Query: 313 ccagtgctgaagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgg 372 || |||||||||||||| || || |||||||| |||||||| |||||||| |||| |||| Sbjct: 1569 ccggtgctgaagccgacaacgtttgacggcgatccggtgggcaacaagtatgacaactgg 1510 Query: 373 gccccgatcgcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagc 432 |||||||| |||||||| | |||||| | || ||||||||||| ||||| |||| || Sbjct: 1509 gccccgattgcgccggaaaccatgagcaaggcagggtgcacctcaatggatttggcaagt 1450 Query: 433 tcagcaaacagaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatg 492 ||||| |||| |||||||||||||| ||||| |||||||| || ||||||| || ||| Sbjct: 1449 tcagcgaacaatggcagcaccagcgtcgtggttgagtcgtcagaagtgaactctgtcatg 1390 Query: 493 accccgctaaaaacgcaggccacgggcacgatcaccagcgtcggcgc 539 | |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1389 atcccgctgaaaacgcaggcgacaggcacgatcaccagcgtcggcgc 1343
>ref|XM_507285.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_F01.29 mRNA Length = 2120 Score = 291 bits (147), Expect = 1e-75 Identities = 297/347 (85%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagct 252 |||||| ||||||||||||||||| ||| |||| ||||||||| |||||||| |||||| Sbjct: 1742 gacttgatgtccatgccaaaaatcgttgatcctaatgttggcagtaagactgtcagagct 1683 Query: 253 gcaactccgacaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtgg 312 |||| | |||| || |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 1682 gcaatggcaacaattttcaggggcaacccagtggccaccagatccttgatggtaatgtag 1623 Query: 313 ccagtgctgaagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgg 372 || |||||||||||||| || || |||||||| |||||||| |||||||| |||| |||| Sbjct: 1622 ccggtgctgaagccgacaacgtttgacggcgatccggtgggcaacaagtatgacaactgg 1563 Query: 373 gccccgatcgcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagc 432 |||||||| |||||||| | |||||| | || ||||||||||| ||||| |||| || Sbjct: 1562 gccccgattgcgccggaaaccatgagcaaggcagggtgcacctcaatggatttggcaagt 1503 Query: 433 tcagcaaacagaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatg 492 ||||| |||| |||||||||||||| ||||| |||||||| || ||||||| || ||| Sbjct: 1502 tcagcgaacaatggcagcaccagcgtcgtggttgagtcgtcagaagtgaactctgtcatg 1443 Query: 493 accccgctaaaaacgcaggccacgggcacgatcaccagcgtcggcgc 539 | |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1442 atcccgctgaaaacgcaggcgacaggcacgatcaccagcgtcggcgc 1396
>dbj|AK098863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P05, full insert sequence Length = 2058 Score = 291 bits (147), Expect = 1e-75 Identities = 297/347 (85%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagct 252 |||||| ||||||||||||||||| ||| |||| ||||||||| |||||||| |||||| Sbjct: 1692 gacttgatgtccatgccaaaaatcgttgatcctaatgttggcagtaagactgtcagagct 1633 Query: 253 gcaactccgacaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtgg 312 |||| | |||| || |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 1632 gcaatggcaacaattttcaggggcaacccagtggccaccagatccttgatggtaatgtag 1573 Query: 313 ccagtgctgaagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgg 372 || |||||||||||||| || || |||||||| |||||||| |||||||| |||| |||| Sbjct: 1572 ccggtgctgaagccgacaacgtttgacggcgatccggtgggcaacaagtatgacaactgg 1513 Query: 373 gccccgatcgcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagc 432 |||||||| |||||||| | |||||| | || ||||||||||| ||||| |||| || Sbjct: 1512 gccccgattgcgccggaaaccatgagcaaggcagggtgcacctcaatggatttggcaagt 1453 Query: 433 tcagcaaacagaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatg 492 ||||| |||| |||||||||||||| ||||| |||||||| || ||||||| || ||| Sbjct: 1452 tcagcgaacaatggcagcaccagcgtcgtggttgagtcgtcagaagtgaactctgtcatg 1393 Query: 493 accccgctaaaaacgcaggccacgggcacgatcaccagcgtcggcgc 539 | |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1392 atcccgctgaaaacgcaggcgacaggcacgatcaccagcgtcggcgc 1346
>dbj|AK072183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H08, full insert sequence Length = 2120 Score = 291 bits (147), Expect = 1e-75 Identities = 297/347 (85%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagct 252 |||||| ||||||||||||||||| ||| |||| ||||||||| |||||||| |||||| Sbjct: 1742 gacttgatgtccatgccaaaaatcgttgatcctaatgttggcagtaagactgtcagagct 1683 Query: 253 gcaactccgacaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtgg 312 |||| | |||| || |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 1682 gcaatggcaacaattttcaggggcaacccagtggccaccagatccttgatggtaatgtag 1623 Query: 313 ccagtgctgaagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgg 372 || |||||||||||||| || || |||||||| |||||||| |||||||| |||| |||| Sbjct: 1622 ccggtgctgaagccgacaacgtttgacggcgatccggtgggcaacaagtatgacaactgg 1563 Query: 373 gccccgatcgcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagc 432 |||||||| |||||||| | |||||| | || ||||||||||| ||||| |||| || Sbjct: 1562 gccccgattgcgccggaaaccatgagcaaggcagggtgcacctcaatggatttggcaagt 1503 Query: 433 tcagcaaacagaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatg 492 ||||| |||| |||||||||||||| ||||| |||||||| || ||||||| || ||| Sbjct: 1502 tcagcgaacaatggcagcaccagcgtcgtggttgagtcgtcagaagtgaactctgtcatg 1443 Query: 493 accccgctaaaaacgcaggccacgggcacgatcaccagcgtcggcgc 539 | |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1442 atcccgctgaaaacgcaggcgacaggcacgatcaccagcgtcggcgc 1396
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 264 bits (133), Expect = 3e-67 Identities = 271/317 (85%) Strand = Plus / Minus Query: 223 cctagtgttggcagcaagactgtgagagctgcaactccgacaaccttgaggggcaatcca 282 |||| ||||||||| |||||||| |||||||||| | |||| || |||||||| ||| Sbjct: 24878510 cctaatgttggcagtaagactgtcagagctgcaatggcaacaattttcaggggcaaccca 24878451 Query: 283 gtggccaccagatccttgatggtaatgtggccagtgctgaagccgacgacattcgacggc 342 |||||||||||||||||||||||||||| ||| |||||||||||||| || || |||||| Sbjct: 24878450 gtggccaccagatccttgatggtaatgtagccggtgctgaagccgacaacgtttgacggc 24878391 Query: 343 gacccggtgggaaacaagtacgacagctgggccccgatcgcgccggagatcatgagaagc 402 || |||||||| |||||||| |||| |||||||||||| |||||||| | |||||| | Sbjct: 24878390 gatccggtgggcaacaagtatgacaactgggccccgattgcgccggaaaccatgagcaag 24878331 Query: 403 gcggggtgcacctcgatggacctggccagctcagcaaacagaggcagcaccagcgtggtg 462 || ||||||||||| ||||| |||| || ||||| |||| |||||||||||||| ||| Sbjct: 24878330 gcagggtgcacctcaatggatttggcaagttcagcgaacaatggcagcaccagcgtcgtg 24878271 Query: 463 gtcgagtcgtcggacatgaactccgtgatgaccccgctaaaaacgcaggccacgggcacg 522 || |||||||| || ||||||| || |||| |||||| ||||||||||| || |||||| Sbjct: 24878270 gttgagtcgtcagaagtgaactctgtcatgatcccgctgaaaacgcaggcgacaggcacg 24878211 Query: 523 atcaccagcgtcggcgc 539 ||||||||||||||||| Sbjct: 24878210 atcaccagcgtcggcgc 24878194 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatc 216 |||||| ||||||||||||||||| Sbjct: 24878646 gacttgatgtccatgccaaaaatc 24878623
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 264 bits (133), Expect = 3e-67 Identities = 271/317 (85%) Strand = Plus / Minus Query: 223 cctagtgttggcagcaagactgtgagagctgcaactccgacaaccttgaggggcaatcca 282 |||| ||||||||| |||||||| |||||||||| | |||| || |||||||| ||| Sbjct: 82956 cctaatgttggcagtaagactgtcagagctgcaatggcaacaattttcaggggcaaccca 82897 Query: 283 gtggccaccagatccttgatggtaatgtggccagtgctgaagccgacgacattcgacggc 342 |||||||||||||||||||||||||||| ||| |||||||||||||| || || |||||| Sbjct: 82896 gtggccaccagatccttgatggtaatgtagccggtgctgaagccgacaacgtttgacggc 82837 Query: 343 gacccggtgggaaacaagtacgacagctgggccccgatcgcgccggagatcatgagaagc 402 || |||||||| |||||||| |||| |||||||||||| |||||||| | |||||| | Sbjct: 82836 gatccggtgggcaacaagtatgacaactgggccccgattgcgccggaaaccatgagcaag 82777 Query: 403 gcggggtgcacctcgatggacctggccagctcagcaaacagaggcagcaccagcgtggtg 462 || ||||||||||| ||||| |||| || ||||| |||| |||||||||||||| ||| Sbjct: 82776 gcagggtgcacctcaatggatttggcaagttcagcgaacaatggcagcaccagcgtcgtg 82717 Query: 463 gtcgagtcgtcggacatgaactccgtgatgaccccgctaaaaacgcaggccacgggcacg 522 || |||||||| || ||||||| || |||| |||||| ||||||||||| || |||||| Sbjct: 82716 gttgagtcgtcagaagtgaactctgtcatgatcccgctgaaaacgcaggcgacaggcacg 82657 Query: 523 atcaccagcgtcggcgc 539 ||||||||||||||||| Sbjct: 82656 atcaccagcgtcggcgc 82640 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 gacttgttgtccatgccaaaaatc 216 |||||| ||||||||||||||||| Sbjct: 83092 gacttgatgtccatgccaaaaatc 83069
>dbj|AK119300.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E12, full insert sequence Length = 2693 Score = 264 bits (133), Expect = 3e-67 Identities = 271/317 (85%) Strand = Plus / Plus Query: 223 cctagtgttggcagcaagactgtgagagctgcaactccgacaaccttgaggggcaatcca 282 |||| ||||||||| |||||||| |||||||||| | |||| || |||||||| ||| Sbjct: 803 cctaatgttggcagtaagactgtcagagctgcaatggcaacaattttcaggggcaaccca 862 Query: 283 gtggccaccagatccttgatggtaatgtggccagtgctgaagccgacgacattcgacggc 342 |||||||||||||||||||||||||||| ||| |||||||||||||| || || |||||| Sbjct: 863 gtggccaccagatccttgatggtaatgtagccggtgctgaagccgacaacgtttgacggc 922 Query: 343 gacccggtgggaaacaagtacgacagctgggccccgatcgcgccggagatcatgagaagc 402 || |||||||| |||||||| |||| |||||||||||| |||||||| | |||||| | Sbjct: 923 gatccggtgggcaacaagtatgacaactgggccccgattgcgccggaaaccatgagcaag 982 Query: 403 gcggggtgcacctcgatggacctggccagctcagcaaacagaggcagcaccagcgtggtg 462 || ||||||||||| ||||| |||| || ||||| |||| |||||||||||||| ||| Sbjct: 983 gcagggtgcacctcaatggatttggcaagttcagcgaacaatggcagcaccagcgtcgtg 1042 Query: 463 gtcgagtcgtcggacatgaactccgtgatgaccccgctaaaaacgcaggccacgggcacg 522 || |||||||| || ||||||| || |||| |||||| ||||||||||| || |||||| Sbjct: 1043 gttgagtcgtcagaagtgaactctgtcatgatcccgctgaaaacgcaggcgacaggcacg 1102 Query: 523 atcaccagcgtcggcgc 539 ||||||||||||||||| Sbjct: 1103 atcaccagcgtcggcgc 1119 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 gacttgttgtccatgccaaaaatc 216 |||||| ||||||||||||||||| Sbjct: 667 gacttgatgtccatgccaaaaatc 690
>gb|AY107570.1| Zea mays PCO128969 mRNA sequence Length = 2022 Score = 147 bits (74), Expect = 4e-32 Identities = 275/342 (80%) Strand = Plus / Minus Query: 202 tccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagctgcaactccg 261 ||||||||||||| || || ||||| |||||||| | | |||||||||||||| ||| Sbjct: 1792 tccatgccaaaaaccagagaacctagagttggcagtagtatcgtgagagctgcaacgccg 1733 Query: 262 acaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtggccagtgctg 321 || | |||| |||| |||||| |||||| ||| ||||||| |||| || |||| | Sbjct: 1732 acgagtttgattggcatgccagtgaccaccatgtccctgatggtgatgtacccggtgccg 1673 Query: 322 aagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgggccccgatc 381 || |||||||| ||| ||||| | ||||||| | || | |||||||||| || |||| Sbjct: 1672 aacccgacgacgttccccggcgtcgcggtgggcagcaggaacgacagctgcgcgccgacg 1613 Query: 382 gcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagctcagcaaac 441 | ||||| || |||||||||| |||||||| |||||||| || ||||||| || | | Sbjct: 1612 gtgccggggaccatgagaagcagcgggtgcacgccgatggacttgcccagctcggcgagc 1553 Query: 442 agaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatgaccccgcta 501 || |||||||||||||||||||| | ||||||||| ||||||||||||||| ||||| Sbjct: 1552 agcggcagcaccagcgtggtggtggcgtcgtcggaggtgaactccgtgatgaggccgctg 1493 Query: 502 aaaacgcaggccacgggcacgatcaccagcgtcggcgcgccc 543 || ||||||||||||||| |||| |||||| |||||||||| Sbjct: 1492 aagacgcaggccacgggcgcgatggccagcgccggcgcgccc 1451
>dbj|AK105756.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D02, full insert sequence Length = 1959 Score = 129 bits (65), Expect = 1e-26 Identities = 272/341 (79%) Strand = Plus / Minus Query: 202 tccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagctgcaactccg 261 ||||||||||||| || || |||| |||||||| | || |||||||||||||| ||| Sbjct: 1720 tccatgccaaaaacgacggatcctaacgttggcagtaggatggtgagagctgcaaccccg 1661 Query: 262 acaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtggccagtgctg 321 |||| || |||||| ||| | | ||||| ||||||||| | |||| ||| |||||| Sbjct: 1660 acaattttcaggggcgttccggcgatcaccatgtccttgatgctgatgtagcccgtgctg 1601 Query: 322 aagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgggccccgatc 381 ||||||||||| || |||||| |||||||| | || ||| |||||||| || |||| Sbjct: 1600 aagccgacgacgttgcccggcgagccggtgggcagcaggtaggacagctgcgcgccgacg 1541 Query: 382 gcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagctcagcaaac 441 ||||||| || |||||| || |||||||| |||||||| || ||||||| || | | Sbjct: 1540 gcgccggggaccatgaggaggagcgggtgcacgccgatggacttgcccagctcggcgagc 1481 Query: 442 agaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatgaccccgcta 501 || || ||||||||||||| ||||| ||||||||| ||||||| |||||| | ||||| Sbjct: 1480 agcgggagcaccagcgtggcggtcgcgtcgtcggaggtgaactcggtgatggcgccgctg 1421 Query: 502 aaaacgcaggccacgggcacgatcaccagcgtcggcgcgcc 542 || ||||| ||||||||| |||| |||||| ||||||||| Sbjct: 1420 aagacgcacgccacgggcgcgatggccagcgccggcgcgcc 1380
>dbj|AK067836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123J03, full insert sequence Length = 1969 Score = 129 bits (65), Expect = 1e-26 Identities = 272/341 (79%) Strand = Plus / Minus Query: 202 tccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagctgcaactccg 261 ||||||||||||| || || |||| |||||||| | || |||||||||||||| ||| Sbjct: 1718 tccatgccaaaaacgacggatcctaacgttggcagtaggatggtgagagctgcaaccccg 1659 Query: 262 acaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtggccagtgctg 321 |||| || |||||| ||| | | ||||| ||||||||| | |||| ||| |||||| Sbjct: 1658 acaattttcaggggcgttccggcgatcaccatgtccttgatgctgatgtagcccgtgctg 1599 Query: 322 aagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgggccccgatc 381 ||||||||||| || |||||| |||||||| | || ||| |||||||| || |||| Sbjct: 1598 aagccgacgacgttgcccggcgagccggtgggcagcaggtaggacagctgcgcgccgacg 1539 Query: 382 gcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagctcagcaaac 441 ||||||| || |||||| || |||||||| |||||||| || ||||||| || | | Sbjct: 1538 gcgccggggaccatgaggaggagcgggtgcacgccgatggacttgcccagctcggcgagc 1479 Query: 442 agaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatgaccccgcta 501 || || ||||||||||||| ||||| ||||||||| ||||||| |||||| | ||||| Sbjct: 1478 agcgggagcaccagcgtggcggtcgcgtcgtcggaggtgaactcggtgatggcgccgctg 1419 Query: 502 aaaacgcaggccacgggcacgatcaccagcgtcggcgcgcc 542 || ||||| ||||||||| |||| |||||| ||||||||| Sbjct: 1418 aagacgcacgccacgggcgcgatggccagcgccggcgcgcc 1378
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 125 bits (63), Expect = 2e-25 Identities = 240/299 (80%) Strand = Plus / Minus Query: 244 gtgagagctgcaactccgacaaccttgaggggcaatccagtggccaccagatccttgatg 303 |||||||||||||| ||||||| || |||||| ||| | | ||||| ||||||||| Sbjct: 18549320 gtgagagctgcaaccccgacaattttcaggggcgttccggcgatcaccatgtccttgatg 18549261 Query: 304 gtaatgtggccagtgctgaagccgacgacattcgacggcgacccggtgggaaacaagtac 363 | |||| ||| ||||||||||||||||| || |||||| |||||||| | || ||| Sbjct: 18549260 ctgatgtagcccgtgctgaagccgacgacgttgcccggcgagccggtgggcagcaggtag 18549201 Query: 364 gacagctgggccccgatcgcgccggagatcatgagaagcgcggggtgcacctcgatggac 423 |||||||| || |||| ||||||| || |||||| || |||||||| |||||||| Sbjct: 18549200 gacagctgcgcgccgacggcgccggggaccatgaggaggagcgggtgcacgccgatggac 18549141 Query: 424 ctggccagctcagcaaacagaggcagcaccagcgtggtggtcgagtcgtcggacatgaac 483 || ||||||| || | ||| || ||||||||||||| ||||| ||||||||| ||||| Sbjct: 18549140 ttgcccagctcggcgagcagcgggagcaccagcgtggcggtcgcgtcgtcggaggtgaac 18549081 Query: 484 tccgtgatgaccccgctaaaaacgcaggccacgggcacgatcaccagcgtcggcgcgcc 542 || |||||| | ||||| || ||||| ||||||||| |||| |||||| ||||||||| Sbjct: 18549080 tcggtgatggcgccgctgaagacgcacgccacgggcgcgatggccagcgccggcgcgcc 18549022
>gb|BT009631.1| Triticum aestivum clone wre1n.pk173.d1:fis, full insert mRNA sequence Length = 674 Score = 115 bits (58), Expect = 2e-22 Identities = 271/342 (79%) Strand = Plus / Minus Query: 202 tccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagctgcaactccg 261 ||||||||||||| ||| || ||||| ||||| || | ||| | ||||| |||||| || Sbjct: 454 tccatgccaaaaaccacagaacctagagttggaagtaggacggcgagagttgcaacgccc 395 Query: 262 acaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtggccagtgctg 321 || || |||| ||| | ||| ||| ||||| ||||||||||| |||| ||| |||| | Sbjct: 394 accactttgatgggtattccggtgagcaccatgtccttgatggtgatgtagccggtgccg 335 Query: 322 aagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgggccccgatc 381 || |||||||| || | |||||| ||||||| | || ||| |||||||| || |||| | Sbjct: 334 aacccgacgacgttgggcggcgaggcggtgggcagcaggtaggacagctgcgcgccgacc 275 Query: 382 gcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagctcagcaaac 441 | |||| || |||||| ||| |||||||| |||||| | ||||||| || | | Sbjct: 274 gtaccggggaccatgagcagcagagggtgcacgccgatggtgtttcccagctccgccagc 215 Query: 442 agaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatgaccccgcta 501 || ||||| ||||| ||||||| || |||||| ||| |||||||||||||||| |||| Sbjct: 214 agcggcaggaccagggtggtggccgcgtcgtctgacgtgaactccgtgatgacggcgctg 155 Query: 502 aaaacgcaggccacgggcacgatcaccagcgtcggcgcgccc 543 || ||||| ||||||||| |||||||||||| |||||||||| Sbjct: 154 aagacgcacgccacgggcgcgatcaccagcggcggcgcgccc 113
>gb|BT009423.1| Triticum aestivum clone wlmk1.pk0017.h2:fis, full insert mRNA sequence Length = 949 Score = 115 bits (58), Expect = 2e-22 Identities = 271/342 (79%) Strand = Plus / Minus Query: 202 tccatgccaaaaatcactgaccctagtgttggcagcaagactgtgagagctgcaactccg 261 ||||||||||||| ||| || ||||| ||||| || | ||| | ||||| |||||| || Sbjct: 725 tccatgccaaaaaccacagaacctagagttggaagtaggacggcgagagttgcaacgccc 666 Query: 262 acaaccttgaggggcaatccagtggccaccagatccttgatggtaatgtggccagtgctg 321 || || |||| ||| | ||| ||| ||||| ||||||||||| |||| ||| |||| | Sbjct: 665 accactttgatgggtattccggtgagcaccatgtccttgatggtgatgtagccggtgccg 606 Query: 322 aagccgacgacattcgacggcgacccggtgggaaacaagtacgacagctgggccccgatc 381 || |||||||| || | |||||| ||||||| | || ||| |||||||| || |||| | Sbjct: 605 aacccgacgacgttgggcggcgaggcggtgggcagcaggtaggacagctgcgcgccgacc 546 Query: 382 gcgccggagatcatgagaagcgcggggtgcacctcgatggacctggccagctcagcaaac 441 | |||| || |||||| ||| |||||||| |||||| | ||||||| || | | Sbjct: 545 gtaccggggaccatgagcagcagagggtgcacgccgatggtgtttcccagctccgccagc 486 Query: 442 agaggcagcaccagcgtggtggtcgagtcgtcggacatgaactccgtgatgaccccgcta 501 || ||||| ||||| ||||||| || |||||| ||| |||||||||||||||| |||| Sbjct: 485 agcggcaggaccagggtggtggccgcgtcgtctgacgtgaactccgtgatgacggcgctg 426 Query: 502 aaaacgcaggccacgggcacgatcaccagcgtcggcgcgccc 543 || ||||| ||||||||| |||||||||||| |||||||||| Sbjct: 425 aagacgcacgccacgggcgcgatcaccagcggcggcgcgccc 384
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 285 ggccaccagatccttgatggtaatg 309 ||||||||||||||||||||||||| Sbjct: 1781720 ggccaccagatccttgatggtaatg 1781744
>emb|AL451164.13| Human DNA sequence from clone RP11-298E9 on chromosome 10 Contains the 3' end of the PFKP gene for phosphofructokinase platelet, a novel gene (FLJ40226) the PITRM1 gene for pitrilysin metalloproteinase 1 (MP1 hMP1 KIAA1104), three novel genes and two CpG islands, complete sequence Length = 163070 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 6 atatatttatacatacacaccttgtaca 33 |||||| ||||||||||||||||||||| Sbjct: 16395 atatatatatacatacacaccttgtaca 16422
>gb|AC133902.12| Mus musculus chromosome 10, clone RP24-538B17, complete sequence Length = 199604 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 gaccctagtgttggcagcaaga 241 |||||||||||||||||||||| Sbjct: 185017 gaccctagtgttggcagcaaga 184996
>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete sequence Length = 165903 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gaatatatttatacatacacac 25 |||||||||||||||||||||| Sbjct: 52247 gaatatatttatacatacacac 52226
>gb|AC099711.5| Mus musculus chromosome 15, clone RP23-397C11, complete sequence Length = 207144 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gaatatatttatacatacacac 25 |||||||||||||||||||||| Sbjct: 28936 gaatatatttatacatacacac 28957
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gaatatatttatacatacacac 25 |||||||||||||||||||||| Sbjct: 14704 gaatatatttatacatacacac 14683
>gb|AC145789.2| Xenopus tropicalis clone CH216-127D2, complete sequence Length = 153054 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gaatatatttatacatacacac 25 |||||||||||||||||||||| Sbjct: 28436 gaatatatttatacatacacac 28457
>gb|AC005083.1| Homo sapiens BAC clone CTA-281G5 from 7, complete sequence Length = 146285 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tatacatacacaccttgtacaa 34 |||||||||||||||||||||| Sbjct: 113490 tatacatacacaccttgtacaa 113469
>gb|AC156275.6| Mus musculus 10 BAC RP24-192F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160348 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 gaccctagtgttggcagcaaga 241 |||||||||||||||||||||| Sbjct: 144335 gaccctagtgttggcagcaaga 144356
>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence Length = 196891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 33286 aatatatttatacatacacac 33306
>gb|AC147663.3| Pan troglodytes BAC clone CH251-304A22 from Y, complete sequence Length = 162854 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 105496 aatatatttatacatacacac 105476
>gb|AC116413.12| Mus musculus chromosome 8, clone RP24-84J11, complete sequence Length = 210471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 86588 aatatatttatacatacacac 86568
>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence Length = 195146 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 71916 aatatatttatacatacacac 71936
>gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, complete sequence Length = 142320 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 96146 aatatatttatacatacacac 96126
>emb|CR384078.17| Zebrafish DNA sequence from clone DKEY-251E16 in linkage group 6, complete sequence Length = 181633 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 115692 aatatatttatacatacacac 115712
>gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, complete sequence Length = 163480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 57207 aatatatttatacatacacac 57187
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 13229 aatatatttatacatacacac 13249
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 17208688 aatatatttatacatacacac 17208668
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 1583493 aatatatttatacatacacac 1583473
>dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, complete sequences Length = 163477 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 106271 aatatatttatacatacacac 106291
>gb|AF003947.1|AF003947 Rhodococcus opacus succinyl CoA:3-oxoadipate CoA transferase subunit homolog (pcaI') gene, partial cds, protocatechuate dioxygenase beta subunit (pcaH), protocatechuate dioxygenase alpha subunit (pcaG), 3-carboxy-cis,cis-muconate cycloisomerase homolog (pcaB), 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (pcaL) and PcaR (pcaR) genes, complete cds, and 3-oxoadipyl CoA thiolase homolog (pcaF') gene, partial cds Length = 5475 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 cgatcaccagcgtcggcgcgc 541 ||||||||||||||||||||| Sbjct: 3755 cgatcaccagcgtcggcgcgc 3735
>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence Length = 188348 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aatatatttatacatacacac 25 ||||||||||||||||||||| Sbjct: 121558 aatatatttatacatacacac 121578
>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence Length = 154085 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgccagaccaaggatgaaagg 154 ||||||||||||||||||||| Sbjct: 51894 tgccagaccaaggatgaaagg 51874
>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete sequence Length = 195221 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 429 cagctcagcaaacagaggcagcacc 453 |||||||||| |||||||||||||| Sbjct: 142875 cagctcagcacacagaggcagcacc 142851
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgaccctagtgttggcagc 237 |||||||||||||||||||| Sbjct: 62254 ctgaccctagtgttggcagc 62235
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 acgatcaccagcgtcggcgc 539 |||||||||||||||||||| Sbjct: 4046463 acgatcaccagcgtcggcgc 4046482
>gb|AC116808.10| Mus musculus chromosome 15, clone RP24-351J19, complete sequence Length = 164398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggcagcaagactgtgagagc 251 |||||||||||||||||||| Sbjct: 94280 ggcagcaagactgtgagagc 94261
>gb|AC127680.3| Mus musculus BAC clone RP24-159F1 from chromosome X, complete sequence Length = 199848 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 196647 atatatttatacatacacac 196628
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete sequence Length = 190939 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 60645 atatatttatacatacacac 60664
>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete sequence Length = 190856 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 125567 atatatttatacatacacac 125586
>ref|NM_177798.3| Mus musculus fibroblast growth factor receptor substrate 2 (Frs2), mRNA Length = 5701 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 4891 atatatttatacatacacac 4872
>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence Length = 184893 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgaccctagtgttggcagc 237 |||||||||||||||||||| Sbjct: 174308 ctgaccctagtgttggcagc 174289
>gb|AC140554.3| Mus musculus BAC clone RP23-151C18 from chromosome 18, complete sequence Length = 215716 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 165979 atatatttatacatacacac 165960
>gb|AC132378.3| Mus musculus BAC clone RP23-407N22 from chromosome 18, complete sequence Length = 207683 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 193709 atatatttatacatacacac 193728
>emb|CR956627.17| Mouse DNA sequence from clone RP24-402N1 on chromosome X, complete sequence Length = 155119 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 134032 atatatttatacatacacac 134051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 4668 atatatttatacatacacac 4687
>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete sequence Length = 226435 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 110230 atatatttatacatacacac 110249
>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence Length = 224179 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggcagcaagactgtgagagc 251 |||||||||||||||||||| Sbjct: 7356 ggcagcaagactgtgagagc 7337
>emb|AL117334.29|HSJ687F11 Human DNA sequence from clone RP4-687F11 on chromosome 20 Contains the 5' end of the C20orf194 gene for chromosome 20 open reading frame 194, the UBE2V1P1 gene for ubiquitin-conjugating enzyme E2 variant 1 pseudogene 1 and a CpG island, complete sequence Length = 92969 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 30204 atatatttatacatacacac 30223
>emb|AL627383.5| Zebrafish DNA sequence from clone RP71-1O18 in linkage group 14 Contains a novel gene similar to GRIA3 (ionotrophic glutamate receptor AMPA 3), a novel gene similar to THOC2 (THO complex 2) and two CpG islands, complete sequence Length = 166395 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 103432 atatatttatacatacacac 103451
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acggcgacccggtgggaaac 357 |||||||||||||||||||| Sbjct: 41079 acggcgacccggtgggaaac 41060
>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete sequence Length = 196122 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 113098 atatatttatacatacacac 113117
>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete sequence Length = 202812 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 160168 atatatttatacatacacac 160187
>emb|CR556702.10| Mouse DNA sequence from clone RP24-370F24 on chromosome X, complete sequence Length = 148966 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 45513 atatatttatacatacacac 45532
>emb|BX571788.8| Mouse DNA sequence from clone RP23-30M5 on chromosome X, complete sequence Length = 233695 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 213596 atatatttatacatacacac 213615 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 91083 atatatttatacatacacac 91102
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgatggtaatgtggccagtg 318 |||||||||||||||||||| Sbjct: 13579 tgatggtaatgtggccagtg 13560
>gb|AC115622.2| Homo sapiens BAC clone RP11-404I7 from 4, complete sequence Length = 164545 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 83953 atatatttatacatacacac 83934
>gb|AF282864.1|AF282864 Mus musculus cancer related gene-liver 1 mRNA, complete cds Length = 4174 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gatgaaaggttccagaactt 165 |||||||||||||||||||| Sbjct: 1237 gatgaaaggttccagaactt 1256
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 agaacttgcatccatgatcc 178 |||||||||||||||||||| Sbjct: 1971400 agaacttgcatccatgatcc 1971419
>gb|AC124554.5| Mus musculus BAC clone RP23-245F10 from chromosome 3, complete sequence Length = 191481 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 78899 atatatttatacatacacac 78880
>gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, complete sequence Length = 123794 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 99529 atatatttatacatacacac 99548
>dbj|AK031984.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330527B20 product:fibroblast growth factor receptor substrate 2, full insert sequence Length = 1040 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 248 atatatttatacatacacac 229
>dbj|AK035314.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530014B21 product:unclassifiable, full insert sequence Length = 3071 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gatgaaaggttccagaactt 165 |||||||||||||||||||| Sbjct: 174 gatgaaaggttccagaactt 193
>dbj|AK049265.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018A15 product:fibroblast growth factor receptor substrate 2, full insert sequence Length = 2680 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 1186 atatatttatacatacacac 1167
>emb|BX510993.6| Zebrafish DNA sequence from clone DKEY-270L11 in linkage group 1, complete sequence Length = 59178 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 1912 atatatttatacatacacac 1931
>gb|AC123704.21| Mus musculus chromosome 15, clone RP23-351F24, complete sequence Length = 202330 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 138056 atatatttatacatacacac 138037
>emb|BX511226.5| Zebrafish DNA sequence from clone DKEY-41K7 in linkage group 1, complete sequence Length = 252757 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 252669 atatatttatacatacacac 252688
>gb|AC110751.5| Homo sapiens BAC clone RP13-511C16 from 4, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 8065 atatatttatacatacacac 8046
>gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7, complete sequence Length = 118334 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 89906 atatatttatacatacacac 89925
>emb|BX842674.4| Mouse DNA sequence from clone RP24-212K8 on chromosome X, complete sequence Length = 50448 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 8156 atatatttatacatacacac 8175
>emb|BX005084.16| Mouse DNA sequence from clone RP24-468M3 on chromosome 4, complete sequence Length = 90370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gatgaaaggttccagaactt 165 |||||||||||||||||||| Sbjct: 78608 gatgaaaggttccagaactt 78627
>emb|BX548052.7| Zebrafish DNA sequence from clone CH211-286F6 in linkage group 18, complete sequence Length = 146410 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 38096 atatatttatacatacacac 38077
>emb|BX119993.9| Mouse DNA sequence from clone RP23-13I18 on chromosome X, complete sequence Length = 234697 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 82525 atatatttatacatacacac 82544
>gb|BC055334.1| Mus musculus fibroblast growth factor receptor substrate 2, mRNA (cDNA clone MGC:64739 IMAGE:6830555), complete cds Length = 5792 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 4927 atatatttatacatacacac 4908
>gb|BC043109.1| Mus musculus fibroblast growth factor receptor substrate 2, mRNA (cDNA clone MGC:58030 IMAGE:6406912), complete cds Length = 5701 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 4891 atatatttatacatacacac 4872
>emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in linkage group 22, complete sequence Length = 222195 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 66981 atatatttatacatacacac 66962
>emb|CR392341.14| Zebrafish DNA sequence from clone CH211-222E20 in linkage group 10, complete sequence Length = 208667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 55325 atatatttatacatacacac 55344
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acggcgacccggtgggaaac 357 |||||||||||||||||||| Sbjct: 32140 acggcgacccggtgggaaac 32121
>dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-686G23, complete sequences Length = 177933 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 162223 atatatttatacatacacac 162204
>emb|AL670689.7| Mouse DNA sequence from clone RP23-269N5 on chromosome X, complete sequence Length = 195890 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 9966 atatatttatacatacacac 9985
>emb|AL928675.7| Zebrafish DNA sequence from clone DKEY-13B16 in linkage group 5, complete sequence Length = 191304 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 18403 atatatttatacatacacac 18384
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgatggtaatgtggccagtg 318 |||||||||||||||||||| Sbjct: 1286333 tgatggtaatgtggccagtg 1286314
>gb|BC059819.1| Mus musculus N-acylsphingosine amidohydrolase 3-like, mRNA (cDNA clone MGC:69583 IMAGE:6839525), complete cds Length = 4078 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gatgaaaggttccagaactt 165 |||||||||||||||||||| Sbjct: 1140 gatgaaaggttccagaactt 1159
>gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complete sequence Length = 209121 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 atgatccatattcctaacta 191 |||||||||||||||||||| Sbjct: 28762 atgatccatattcctaacta 28781
>emb|CR974424.16| Mouse DNA sequence from clone RP23-288D11 on chromosome X, complete sequence Length = 98547 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 88724 atatatttatacatacacac 88743
>ref|NM_139306.1| Mus musculus N-acylsphingosine amidohydrolase 3-like (Asah3l), mRNA Length = 4174 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gatgaaaggttccagaactt 165 |||||||||||||||||||| Sbjct: 1237 gatgaaaggttccagaactt 1256
>emb|AL929253.5| Mouse DNA sequence from clone RP23-350F14 on chromosome 2, complete sequence Length = 133910 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 21120 atatatttatacatacacac 21139
>emb|AL627134.9| Mouse DNA sequence from clone RP23-71I19 on chromosome 4, complete sequence Length = 172418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 30406 atatatttatacatacacac 30387
>emb|AL845542.9| Mouse DNA sequence from clone RP23-288I12 on chromosome 2, complete sequence Length = 178976 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 23302 atatatttatacatacacac 23283
>emb|AL589661.21| Mouse DNA sequence from clone RP23-58B7 on chromosome 15, complete sequence Length = 241432 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 103078 atatatttatacatacacac 103059
>emb|AL928615.3| Mouse DNA sequence from clone RP23-156E1 on chromosome 2, complete sequence Length = 118543 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atatatttatacatacacac 25 |||||||||||||||||||| Sbjct: 69079 atatatttatacatacacac 69060 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,686,334 Number of Sequences: 3902068 Number of extensions: 4686334 Number of successful extensions: 94714 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94387 Number of HSP's gapped (non-prelim): 315 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)