ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41j04 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/164 (28%), Positives = 76/164 (46%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+S WW N + I SA L A + +LK L +T F VT K + D Sbjct: 854 ILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDF 913 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 G L+ F + IP T + ++NIV + G A+ GP G+ Sbjct: 914 GE--------LYAFKWTTLLIPPTTVLIINIVGVVAGISDAI--NNGYQSWGPLFGKLFF 963 Query: 296 CGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 165 W+++ +PF++GL+ R ++ P V + + L+ + F L R Sbjct: 964 SFWVIVHLYPFLKGLMGR-QNRTPTIVVIWSVLLASIFSLLWVR 1006
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 64.7 bits (156), Expect = 2e-10 Identities = 50/164 (30%), Positives = 79/164 (48%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+ WW N + I SA L A ILK L +T F VT K +S DG Sbjct: 892 ILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSK-ASDEDG 950 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 D A+ L+ F + IP T L ++N+V + G A+ + GP G+ Sbjct: 951 ----DFAE--LYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAI--NSGYQSWGPLFGKLFF 1002 Query: 296 CGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 165 W+++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 1003 AFWVIVHLYPFLKGLMGR-QNRTPTIVVVWSVLLASIFSLLWVR 1045
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 62.4 bits (150), Expect = 1e-09 Identities = 48/164 (29%), Positives = 79/164 (48%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E K ++ WW N + I SA L A +LK +T F VT K +S DG Sbjct: 894 ILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSK-ASDEDG 952 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 D A+ L+ F + IP T + ++N+V + G A+ + GP +G+ + Sbjct: 953 ----DFAE--LYVFKWTSLLIPPTTILLVNLVGIVAGVSYAI--NSGYQSWGPLMGKLLF 1004 Query: 296 CGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 165 W+V +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 1005 AFWVVAHLYPFLKGLLGR-QNRTPTIVIVWSALLASIFSLLWVR 1047
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 61.6 bits (148), Expect = 2e-09 Identities = 48/164 (29%), Positives = 79/164 (48%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+S WW N + I SA L A +LK L +T F VT K +T + Sbjct: 907 ILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ATDED 964 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 G D A+ L+ F + IP T + ++N++ + G AV + GP G+ Sbjct: 965 G---DFAE--LYIFKWTALLIPPTTVLLVNLIGIVAGVSYAV--NSGYQSWGPLFGKLFF 1017 Query: 296 CGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 165 W++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 1018 ALWVIAHLYPFLKGLLGR-QNRTPTIVIVWSVLLASIFSLLWVR 1060
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 59.3 bits (142), Expect = 1e-08 Identities = 39/138 (28%), Positives = 63/138 (45%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+ WW N + I AS+ L A +LK L T F VT K Sbjct: 911 ILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSK------- 963 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 A D A L+ F + IP T L ++NI+ + VG A+ + GP G Sbjct: 964 -AADDGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAI--SNGYDSWGPLFGRLFF 1020 Query: 296 CGWMVLCFWPFVRGLVSR 243 W+++ +PF++G++ + Sbjct: 1021 ALWVIVHLYPFLKGMLGK 1038
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 58.9 bits (141), Expect = 1e-08 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 2/140 (1%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+S W N + I SA L A +LK L +T F VT K +S Sbjct: 875 ILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGAS---- 930 Query: 476 GAGTDEADP--GLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEF 303 DEAD L+ F + IP T L +LN+V + G A+ GP G+ Sbjct: 931 ----DEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAI--NNGYGSWGPLFGKL 984 Query: 302 VCCGWMVLCFWPFVRGLVSR 243 W+++ +PF++GL+ R Sbjct: 985 FFAFWVIVHLYPFLKGLMGR 1004
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 57.8 bits (138), Expect = 3e-08 Identities = 38/125 (30%), Positives = 56/125 (44%) Frame = -2 Query: 617 WWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFT 438 WW N + I SA L A +LK L ET F VT K A D L+ Sbjct: 910 WWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSK--------AADDGEFSELYI 961 Query: 437 FDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVR 258 F + IP T L ++N++ + VG A+ + GP G W++L +PF++ Sbjct: 962 FKWTSLLIPPTTLLIINVIGVIVGISDAI--SNGYDSWGPLFGRLFFAFWVILHLYPFLK 1019 Query: 257 GLVSR 243 GL+ + Sbjct: 1020 GLLGK 1024
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 55.1 bits (131), Expect = 2e-07 Identities = 36/125 (28%), Positives = 58/125 (46%) Frame = -2 Query: 617 WWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFT 438 WW N + I SA L A +LK L +T F VT K +D G +D L+ Sbjct: 925 WWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSK---AADDGEFSD-----LYL 976 Query: 437 FDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVR 258 F + IP L ++N++ + VG A+ + GP G W+++ +PF++ Sbjct: 977 FKWTSLLIPPMTLLIINVIGVIVGVSDAI--SNGYDSWGPLFGRLFFALWVIIHLYPFLK 1034 Query: 257 GLVSR 243 GL+ + Sbjct: 1035 GLLGK 1039
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 54.3 bits (129), Expect = 3e-07 Identities = 42/151 (27%), Positives = 65/151 (43%) Frame = -2 Query: 617 WWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFT 438 WW N + I S+ L A +LK L T F VT K A D L+ Sbjct: 928 WWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSK--------AADDGEFSELYI 979 Query: 437 FDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVR 258 F + IP T L ++NIV + VG A+ GP G W+++ +PF++ Sbjct: 980 FKWTSLLIPPTTLLIINIVGVIVGVSDAI--NNGYDSWGPLFGRLFFALWVIVHLYPFLK 1037 Query: 257 GLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 165 GL+ + + +P + V + L+ + L R Sbjct: 1038 GLLGK-QDRVPTIILVWSILLASILTLLWVR 1067
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 52.4 bits (124), Expect = 1e-06 Identities = 38/138 (27%), Positives = 61/138 (44%) Frame = -2 Query: 656 LMEYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDG 477 ++E + G+S W N + I SA L A LK L +T F VT K + + Sbjct: 811 VLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEF 870 Query: 476 GAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVC 297 G L+ + IP T+L ++N+V + G A+ GP G+ Sbjct: 871 GE--------LYIVKWTTLLIPPTSLLIINLVGVVAGFSDAL--NKGYEAWGPLFGKVFF 920 Query: 296 CGWMVLCFWPFVRGLVSR 243 W++L +PF++GL+ R Sbjct: 921 AFWVILHLYPFLKGLMGR 938
>TRMB_BIFLO (Q8G3T4) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 286 Score = 34.3 bits (77), Expect = 0.35 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -1 Query: 174 LHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKA 70 +H+ + G G +N+GSV + LPLEHV K A + A Sbjct: 209 VHEVMDGLDGWKNLGSVTVSLPLEHVGKGNADMAA 243
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 33.9 bits (76), Expect = 0.45 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = +3 Query: 180 HERSHNQTSLHLDAPRDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGA 359 HE + + D+ R + ++ D+P H PE + ATA S RA DDG Sbjct: 39 HESGISPDTTPADSIRGAAVASPDQPLHGGPERE---ATAPSFSPTRA--------DDGP 87 Query: 360 PCPDG 374 PC DG Sbjct: 88 PCTDG 92
>MEP2_YEAST (P41948) Ammonium transporter MEP2| Length = 499 Score = 32.0 bits (71), Expect = 1.7 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = -2 Query: 617 WWNNHRMQ------RITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEA 456 W N+H Q I +A AW + +++L T+ + S + GTD A Sbjct: 382 WINHHYKQVGYQLAGICAALAWTVTVTSILLLTMN----AIPFLKLRLSADEEELGTDAA 437 Query: 455 DPGLFTFDSAPVFIP 411 G FT++ + +IP Sbjct: 438 QIGEFTYEESTAYIP 452
>CAC1D_HUMAN (Q01668) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) Length = 2161 Score = 31.6 bits (70), Expect = 2.3 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Frame = -2 Query: 587 TSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPV 408 +SAS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 649 SSASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ---- 693 Query: 407 TALSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 273 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 694 ---ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 736
>NCKX5_BRARE (Q49SH1) Sodium/potassium/calcium exchanger 5 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 5) (Solute carrier family 24 member 5) (Protein golden) Length = 513 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = -2 Query: 623 RAWWNNHRMQRITSASAWLLAF-------LTVILKTLGLSETVFEVTRKESSTS 483 R +W N M ++ W+ AF +T++ +TLG+ +TV +T + TS Sbjct: 340 RPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETLGIPDTVMGMTLLAAGTS 393
>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 507 Score = 31.2 bits (69), Expect = 2.9 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Frame = -2 Query: 650 EYKEXGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR--------KE 495 EYK+ GL AW N R R+ +++ L + L G++E F VT +E Sbjct: 366 EYKKAGLRMLAWTNPARNGRVALRYSFVFIPLCLSLCAAGVTEWSFAVTSFPINAWLIRE 425 Query: 494 SSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIG 345 S G + GLF + S V L++L+ + WR+V G Sbjct: 426 SVRFWRYEGNKGSARGLF-WASVWHLPGVMILALLHKKGMWTRVWRSVFG 474
>JHD3D_MOUSE (Q3U2K5) JmjC domain-containing histone demethylation protein 3D| (EC 1.14.11.-) (Jumonji domain-containing protein 2D) Length = 510 Score = 30.8 bits (68), Expect = 3.8 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -1 Query: 216 QGEGWFDCGCVRAPLHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKACY*RK 55 + +G G + KE R + NI ++++ PL+ V QAG+ Y +K Sbjct: 36 ESQGAHRAGLAKVIPPKEWRARQSYDNISNILIATPLQQVVSGQAGVFTQYHKK 89
>CBRB_DICD3 (Q47085) Achromobactin transport system permease protein cbrB| Length = 340 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -2 Query: 458 ADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTA 339 A PGLF ++ +F + +S+ VA++V W A G A Sbjct: 96 ASPGLFGINAGAMFFLIVCVSLFPKVAMSVWLWSAFAGAA 135
>DAF2_MOUSE (Q61476) Complement decay-accelerating factor transmembrane isoform| precursor (DAF-TM) (CD55 antigen) Length = 407 Score = 30.8 bits (68), Expect = 3.8 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 228 DSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 356 +S+ +P D+P+ ++P PAT HE T D+ + G Sbjct: 319 ESVPNPGDQPTPQKPSTVKVPATQHEPDTTTRTSTDKGESNSG 361
>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)| Length = 1186 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Frame = -3 Query: 313 SESSCAVAGWCCASGRS*EGLSA---GESMESRGASXXXXXXXXXRSCTSAQGTNRPGWP 143 ++SS AG + G S G S+ G S+ S G+S +++ G++ G+ Sbjct: 601 TDSSSKSAGSRTSGGSSTYGYSSSHRGGSVSSTGSSSNTDSSTKNAGSSTSGGSSTYGYS 660 Query: 142 SKYWKRNFSSTIGTCNEDSS 83 S + + SST + N DSS Sbjct: 661 SSHRGGSVSSTGSSSNTDSS 680
>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)| (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX) Length = 365 Score = 30.4 bits (67), Expect = 5.0 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = +3 Query: 150 PGRLVPCAEVHERSHNQTSLHLDAP----RDSMLSPADKPSHERPEAQHHPATAHELSDA 317 PGR P A +RS + ++ D+P D SPA PS + TAH+L + Sbjct: 122 PGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPA--PSKRKKRRHRTVFTAHQLEEL 179 Query: 318 RATMNDRRSPD 350 ++ PD Sbjct: 180 EKAFSEAHYPD 190
>CSTN3_MOUSE (Q99JH7) Calsyntenin-3 precursor| Length = 956 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = -2 Query: 611 NNHRMQRITSASAWLLAFLT---VILKTLGLSETVFEVTRKESSTSD-GGAGTDEADPGL 444 ++HR + SA+ ++ V++ LGL + + R+ S T GA TD DP L Sbjct: 837 SSHRNSMVPSAATLIIVVCVGFLVLMVILGLVR-IHSLHRRVSGTGGPSGASTDPKDPDL 895 Query: 443 FTFDSAPVFI 414 F DSA I Sbjct: 896 FWDDSALTII 905
>GNAS_HOMAM (O16118) Guanine nucleotide-binding protein G(s), alpha subunit| (Adenylate cyclase-stimulating G alpha protein) Length = 379 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 539 TLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIV 381 TLG+ ET F+V + D G DE + F+ I VTA S N+V Sbjct: 189 TLGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV 241
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic| kidney disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 8.6 Identities = 24/71 (33%), Positives = 28/71 (39%) Frame = -2 Query: 509 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 330 VT DG A D A P P VTA+ LA+GA A++GT V Sbjct: 300 VTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAV-------LALGAGSALLGTDVQV 352 Query: 329 HGGPGIGEFVC 297 P E VC Sbjct: 353 EAAPAALELVC 363
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 29.6 bits (65), Expect = 8.6 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -2 Query: 581 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 402 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 710 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 752 Query: 401 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 273 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 753 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 795
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.6 bits (65), Expect = 8.6 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +3 Query: 204 SLHLDAPRDSMLSPADKPSHER--------PEAQHHPATAHELSDARATMNDRR 341 SLHL +P S L+PA PS R EA P L A A M D R Sbjct: 297 SLHLQSPHSSPLAPAAAPSDPRLQDLKAREAEAWEEPTELLGLPSALAGMQDLR 350
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2| Length = 943 Score = 29.6 bits (65), Expect = 8.6 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +3 Query: 225 RDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGAPCPDGEGHNVQH*ER 404 R PA+KP P ++ P ++ A+A DRR+ DD + +G + Sbjct: 268 RQRPAKPAEKPQAAAPAVENKP-----VNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRD 322 Query: 405 RHRDENG 425 R+ NG Sbjct: 323 RNNARNG 329
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 29.6 bits (65), Expect = 8.6 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -2 Query: 581 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 402 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 672 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 714 Query: 401 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 273 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 715 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 757
>CAC1D_MESAU (Q99244) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide isoform 2) Length = 1610 Score = 29.6 bits (65), Expect = 8.6 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -2 Query: 581 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 402 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 650 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 692 Query: 401 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 273 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 693 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 735
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 219 APRDSMLSPADK-PSHERPEAQHHPATAHELSDARATMNDRRSPDD 353 AP+ +LSP+ PSH RP A P+T + AT + +R +D Sbjct: 115 APQHLLLSPSRAGPSHPRPTAVPGPSTRQNQAQWEATRHQQRLHND 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,949,645 Number of Sequences: 219361 Number of extensions: 1817456 Number of successful extensions: 5814 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5802 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
