ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41i24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 72 2e-09
2gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
5gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AK070696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
9dbj|AK068071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
10emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711 46 0.14
11ref|NM_001021786.1| Schizosaccharomyces pombe 972h- hypothetical... 46 0.14
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.56
13ref|XM_765656.1| Giardia lamblia ATCC 50803 myosin heavy chain (... 44 0.56
14gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.56
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
16gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.56
17dbj|AK071140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
18emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chro... 42 2.2
19emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F... 42 2.2
20gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, comple... 42 2.2
21gb|AC093214.2| Homo sapiens chromosome 5 clone CTD-2060C23, comp... 42 2.2
22gb|AC016594.7| Homo sapiens chromosome 5 clone CTD-2010O3, compl... 42 2.2
23ref|NM_124743.1| Arabidopsis thaliana unknown protein AT5G53640 ... 40 8.8
24gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, co... 40 8.8
25gb|AC087112.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.8
26gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, c... 40 8.8
27gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hosp... 40 8.8
28gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 40 8.8
29emb|Z66512.1|CEF52H3 Caenorhabditis elegans Cosmid F52H3, comple... 40 8.8
30gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complet... 40 8.8
31gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6... 40 8.8
32gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; put... 40 8.8
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
35gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 8.8
36gb|AC112697.4| Homo sapiens BAC clone RP11-562O10 from 2, comple... 40 8.8
37gb|AC122134.4| Homo sapiens BAC clone RP11-309M7 from 2, complet... 40 8.8
38dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
39gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Canc... 40 8.8
40dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.8
41dbj|AK102217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
42emb|AJ328566.1|HSA328566 Homo sapiens genomic sequence surroundi... 40 8.8
43dbj|AP001877.5| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 8.8
44dbj|AP000627.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 8.8
45gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
46gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, comple... 40 8.8
47dbj|AB016530.1| Cricetulus griseus gene for D-amino acid oxidase... 40 8.8 
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0072P02, complete sequence
          Length = 157488

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 358   gttagctcgatcaagctctttgcagagttgaagccgatgatcgtaacactcttcagcttg 417
             |||||||||||||||||||||||||||| ||| ||| |||||   ||||||   || |||
Sbjct: 16578 gttagctcgatcaagctctttgcagagtagaaaccggtgatctccacactccggaggttg 16519

                                 
Query: 418   tcatggcggtgtcctggcat 437
             ||||| ||||||||||||||
Sbjct: 16518 tcatgacggtgtcctggcat 16499



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 358   gttagctcgatcaagctctttgcagag 384
             |||||||||||||||||||||||||||
Sbjct: 41875 gttagctcgatcaagctctttgcagag 41849



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   gttagctcgatcaagctctt 377
             ||||||||||||||||||||
Sbjct: 21739 gttagctcgatcaagctctt 21720
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>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0010B06, complete sequence
          Length = 129310

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 358   gttagctcgatcaagctctttgcagagttgaagccgatgatcgtaacactcttcagcttg 417
             |||||||||||||||||||||||||||| ||| ||| |||||   ||||||   || |||
Sbjct: 80568 gttagctcgatcaagctctttgcagagtagaaaccggtgatctccacactccggaggttg 80509

                                 
Query: 418   tcatggcggtgtcctggcat 437
             ||||| ||||||||||||||
Sbjct: 80508 tcatgacggtgtcctggcat 80489



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 358    gttagctcgatcaagctctttgcagag 384
              |||||||||||||||||||||||||||
Sbjct: 105865 gttagctcgatcaagctctttgcagag 105839



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   gttagctcgatcaagctctt 377
             ||||||||||||||||||||
Sbjct: 85729 gttagctcgatcaagctctt 85710
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 358      gttagctcgatcaagctctttgcagagttgaagccgatgatcgtaacactcttcagcttg 417
                |||||||||||||||||||||||||||| ||| ||| |||||   ||||||   || |||
Sbjct: 19297352 gttagctcgatcaagctctttgcagagtagaaaccggtgatctccacactccggaggttg 19297293

                                    
Query: 418      tcatggcggtgtcctggcat 437
                ||||| ||||||||||||||
Sbjct: 19297292 tcatgacggtgtcctggcat 19297273



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 358      gttagctcgatcaagctctttgcagag 384
                |||||||||||||||||||||||||||
Sbjct: 19322649 gttagctcgatcaagctctttgcagag 19322623



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 416      tgtcatggcggtgtcctggcatccgcctcag 446
                ||||||||||||||||||||||| |||||||
Sbjct: 19186832 tgtcatggcggtgtcctggcatctgcctcag 19186862



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      gttagctcgatcaagctctt 377
                ||||||||||||||||||||
Sbjct: 19302513 gttagctcgatcaagctctt 19302494
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 372   gctctttgcagagttgaagccgatgatcgtaacactcttcagcttgtcatggcggtgtcc 431
             |||||||||||||   || || |||||| | ||| |||| || ||| |||||||||||||
Sbjct: 15886 gctctttgcagagcaaaacccaatgatcttcacattcttgaggttgacatggcggtgtcc 15827

                             
Query: 432   tggcatccgcctcaga 447
             ||||||| ||||||||
Sbjct: 15826 tggcatctgcctcaga 15811
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>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 372   gctctttgcagagttgaagccgatgatcgtaacactcttcagcttgtcatggcggtgtcc 431
             |||||||||||||   || || |||||| | ||| |||| || ||| |||||||||||||
Sbjct: 68549 gctctttgcagagcaaaacccaatgatcttcacattcttgaggttgacatggcggtgtcc 68490

                             
Query: 432   tggcatccgcctcaga 447
             ||||||| ||||||||
Sbjct: 68489 tggcatctgcctcaga 68474
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 372      gctctttgcagagttgaagccgatgatcgtaacactcttcagcttgtcatggcggtgtcc 431
                |||||||||||||   || || |||||| | ||| |||| || ||| |||||||||||||
Sbjct: 26371195 gctctttgcagagcaaaacccaatgatcttcacattcttgaggttgacatggcggtgtcc 26371136

                                
Query: 432      tggcatccgcctcaga 447
                ||||||| ||||||||
Sbjct: 26371135 tggcatctgcctcaga 26371120
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>dbj|AK070696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057L12, full
            insert sequence
          Length = 2075

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                        
Query: 372  gctctttgcagagttgaagccgatgatcgtaacactcttcagcttgtcatggcggtgtcc 431
            |||||||||||||   || || |||||| | ||| |||| || ||| |||||||||||||
Sbjct: 1620 gctctttgcagagcaaaacccaatgatcttcacattcttgaggttgacatggcggtgtcc 1561

                            
Query: 432  tggcatccgcctcaga 447
            ||||||| ||||||||
Sbjct: 1560 tggcatctgcctcaga 1545
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 416    tgtcatggcggtgtcctggcatccgcctcag 446
              ||||||||||||||||||||||| |||||||
Sbjct: 117837 tgtcatggcggtgtcctggcatctgcctcag 117867
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>dbj|AK068071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E16, full
            insert sequence
          Length = 1905

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 416  tgtcatggcggtgtcctggcatccgcctcag 446
            ||||||||||||||||||||||| |||||||
Sbjct: 1375 tgtcatggcggtgtcctggcatctgcctcag 1345
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>emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711
          Length = 38000

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 23    tagcaaaaatggtcctggccaac 45
             |||||||||||||||||||||||
Sbjct: 15299 tagcaaaaatggtcctggccaac 15321
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>ref|NM_001021786.1| Schizosaccharomyces pombe 972h- hypothetical protein
          (SPBC1711.07), partial mRNA
          Length = 1443

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 23 tagcaaaaatggtcctggccaac 45
          |||||||||||||||||||||||
Sbjct: 39 tagcaaaaatggtcctggccaac 61
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 358     gttagctcgatcaagctctttg 379
               ||||||||||||||||||||||
Sbjct: 5347344 gttagctcgatcaagctctttg 5347323
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>ref|XM_765656.1| Giardia lamblia ATCC 50803 myosin heavy chain (GLP_609_32276_35632)
            partial mRNA
          Length = 3357

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 134  agcagtggacgcaaggctccagaacg 159
            ||||||||||||||||||| ||||||
Sbjct: 2214 agcagtggacgcaaggctcaagaacg 2239
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>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   gttagctcgatcaagctctttg 379
             ||||||||||||||||||||||
Sbjct: 53512 gttagctcgatcaagctctttg 53491
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 358     gttagctcgatcaagctctttg 379
               ||||||||||||||||||||||
Sbjct: 5346559 gttagctcgatcaagctctttg 5346538
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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0006P09, complete sequence
          Length = 153950

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   gttagctcgatcaagctctttg 379
             ||||||||||||||||||||||
Sbjct: 77754 gttagctcgatcaagctctttg 77733
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>dbj|AK071140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B16, full
            insert sequence
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 358  gttagctcgatcaagctctttg 379
            ||||||||||||||||||||||
Sbjct: 1340 gttagctcgatcaagctctttg 1319
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>emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chromosome 1p31.3-33
             Contains a novel gene, complete sequence
          Length = 123085

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 483   gggttttgctgcttgcaagatgaaa 507
             |||||||||||||||||| ||||||
Sbjct: 81790 gggttttgctgcttgcaaaatgaaa 81814
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>emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F12 on chromosome 6p22.3-24
            Contains the 5' end of a novel gene, complete sequence
          Length = 123489

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 501  gatgaaagactccaagtgagg 521
            |||||||||||||||||||||
Sbjct: 6916 gatgaaagactccaagtgagg 6896
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>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence
          Length = 185624

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   tttatctcaagtcataaaatg 128
             |||||||||||||||||||||
Sbjct: 26435 tttatctcaagtcataaaatg 26455
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>gb|AC093214.2| Homo sapiens chromosome 5 clone CTD-2060C23, complete sequence
          Length = 148327

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    gagtattctggcaaaaggtag 256
              |||||||||||||||||||||
Sbjct: 137976 gagtattctggcaaaaggtag 137956
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>gb|AC016594.7| Homo sapiens chromosome 5 clone CTD-2010O3, complete sequence
          Length = 146235

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    gagtattctggcaaaaggtag 256
              |||||||||||||||||||||
Sbjct: 106352 gagtattctggcaaaaggtag 106332
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>ref|NM_124743.1| Arabidopsis thaliana unknown protein AT5G53640 mRNA, complete cds
          Length = 2754

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  ttttatctcaagtcatggat 103
           ||||||||||||||||||||
Sbjct: 322 ttttatctcaagtcatggat 341
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>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence
          Length = 222869

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    tctcaagtcataaaatggtt 131
              ||||||||||||||||||||
Sbjct: 217021 tctcaagtcataaaatggtt 217040
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>gb|AC087112.2| Rattus norvegicus strain Brown Norway clone RP31-162L19, complete
             sequence
          Length = 149639

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 569   gaaatgcatatccatcaacagtta 592
             ||||||||||||| ||||||||||
Sbjct: 81458 gaaatgcatatccctcaacagtta 81435
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>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence
          Length = 224129

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  tctcaagtcataaaatggtt 131
            ||||||||||||||||||||
Sbjct: 9875 tctcaagtcataaaatggtt 9894
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>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224326

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 569    gaaatgcatatccatcaacagtta 592
              ||||||||||||| ||||||||||
Sbjct: 161855 gaaatgcatatccctcaacagtta 161832
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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    tatctcaagtcatggataca 106
             ||||||||||||||||||||
Sbjct: 68538 tatctcaagtcatggataca 68557
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>emb|Z66512.1|CEF52H3 Caenorhabditis elegans Cosmid F52H3, complete sequence
          Length = 42632

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  ttttatctcaagtcataaaa 126
            ||||||||||||||||||||
Sbjct: 2378 ttttatctcaagtcataaaa 2359
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>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence
          Length = 223068

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 gtcataaaatggttgcagca 137
           ||||||||||||||||||||
Sbjct: 755 gtcataaaatggttgcagca 774
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>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete
              sequence
          Length = 230839

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 569    gaaatgcatatccatcaacagtta 592
              ||||||||||||| ||||||||||
Sbjct: 186812 gaaatgcatatccctcaacagtta 186789
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>gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; putative ankyrin-related protein
             and cystic fibrosis transmembrane conductance regulator
             (CFTR) genes, complete cds; and unknown gene
          Length = 357856

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 569   gaaatgcatatccatcaacagtta 592
             ||||||||||||| ||||||||||
Sbjct: 20021 gaaatgcatatccctcaacagtta 19998
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       tatctcaagtcatggataca 106
                ||||||||||||||||||||
Sbjct: 18144590 tatctcaagtcatggataca 18144571
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 358    gttagctcgatcaagctctttgcagagttgaa 389
              |||||||| | |||||||||||| ||||||||
Sbjct: 304336 gttagctcaaccaagctctttgcggagttgaa 304367
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 569     gaaatgcatatccatcaacagtta 592
               ||||||||||||| ||||||||||
Sbjct: 1073244 gaaatgcatatccctcaacagtta 1073221
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>gb|AC112697.4| Homo sapiens BAC clone RP11-562O10 from 2, complete sequence
          Length = 94769

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 536  aaggaaccaggtaaatataatcat 559
            |||||||||||||||||| |||||
Sbjct: 1883 aaggaaccaggtaaatatgatcat 1906
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>gb|AC122134.4| Homo sapiens BAC clone RP11-309M7 from 2, complete sequence
          Length = 15049

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 536   aaggaaccaggtaaatataatcat 559
             |||||||||||||||||| |||||
Sbjct: 14932 aaggaaccaggtaaatatgatcat 14955
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 358   gttagctcgatcaagctctttgcagagttgaa 389
             |||||||| | |||||||||||| ||||||||
Sbjct: 33120 gttagctcaaccaagctctttgcggagttgaa 33151
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>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208007

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 569    gaaatgcatatccatcaacagtta 592
              ||||||||||||| ||||||||||
Sbjct: 113350 gaaatgcatatccctcaacagtta 113327
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>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ttttatctcaagtcatggat 103
             ||||||||||||||||||||
Sbjct: 76602 ttttatctcaagtcatggat 76583
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>dbj|AK102217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L07, full
            insert sequence
          Length = 1963

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 358  gttagctcgatcaagctctttgcagagttgaagccgatgatcgtaacactcttcag 413
            |||||||| | ||||||||| || |||||||| || ||||||   |||||||||||
Sbjct: 1504 gttagctcaaccaagctcttcgcggagttgaaccctatgatctccacactcttcag 1449
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>emb|AJ328566.1|HSA328566 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-PF17R
          Length = 749

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 528 atccagaaaaggaaccaggt 547
           ||||||||||||||||||||
Sbjct: 33  atccagaaaaggaaccaggt 14
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>dbj|AP001877.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2564P9, complete
              sequence
          Length = 167306

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgacacatgcttgtagtca 75
              ||||||||||||||||||||
Sbjct: 134030 gtgacacatgcttgtagtca 134011
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>dbj|AP000627.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-9I16, complete
             sequence
          Length = 120240

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gtgacacatgcttgtagtca 75
             ||||||||||||||||||||
Sbjct: 63502 gtgacacatgcttgtagtca 63483
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       tatctcaagtcatggataca 106
                ||||||||||||||||||||
Sbjct: 18153843 tatctcaagtcatggataca 18153824
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>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence
          Length = 154142

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gtcataaaatggttgcagca 137
             ||||||||||||||||||||
Sbjct: 39781 gtcataaaatggttgcagca 39762
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>dbj|AB016530.1| Cricetulus griseus gene for D-amino acid oxidase, complete cds
          Length = 1588

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 317  ctaaggactctagtgaccat 336
            ||||||||||||||||||||
Sbjct: 1103 ctaaggactctagtgaccat 1122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,975,365
Number of Sequences: 3902068
Number of extensions: 4975365
Number of successful extensions: 85087
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84829
Number of HSP's gapped (non-prelim): 255
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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