>CALCA_CHICK (P10286) Calcitonin gene-related peptide precursor (CGRP)|
          Length = 125

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 28/90 (31%), Positives = 33/90 (36%)
 Frame = -2

Query: 326 DSIKDEGRMTREQYAALRRKIGGTYKDFFKSXXXXXXXXXXXXXXDKTCKVCKKDTRGEP 147
           +SI D  R+T   Y A RR +    KDF +                   + C   T    
Sbjct: 33  ESITD--RVTLSDYEA-RRLLNALVKDFIQMTAEELEQASEGNSVTAQKRACNTATCVTH 89

Query: 146 RQVDNLGRYMHVACAENSKPTNFFSKLFGR 57
           R  D L R   V    N  PTN  SK FGR
Sbjct: 90  RLADFLSRSGGVG-KNNFVPTNVGSKAFGR 118

>PCF11_YEAST (P39081) Protein PCF11 (protein 1 of CF I)|
          Length = 626

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = -2

Query: 470 SVRAYAKADEXEGEKKVPXQSLFGNITEALDFSQVRSEKDAELLYEARDSIKDEGRM--- 300
           ++  +    +   ++     SLFGNI+    F ++  +K    +     S+K EG +   
Sbjct: 271 AIPLFGNNSDTTNQQNSLSSSLFGNISGVESFQEIEKKKSLNKINNLYASLKAEGLIYTP 330

Query: 299 TREQYAALRRKIGG 258
            +E    L +K+ G
Sbjct: 331 PKESIVTLYKKLNG 344

>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/42 (50%), Positives = 24/42 (57%)
 Frame = +2

Query: 263  QSSSEALHTVPLSSSLHL*WNPWPRTAAPRPSPTGPARSPAP 388
            +S S  LH   LSSS  L  +P   T +  PSPT P RSPAP
Sbjct: 1090 RSFSSGLHH-SLSSSESLPGSP---THSLSPSPTTPCRSPAP 1127

>VS06_ROTPY (Q06386) VP6 protein (Major capsid protein) (Major internal|
           structural protein)
          Length = 397

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 210 VFAINFN-I*LEEILVGATNLPPKRCILFPCHPPFIFDGIPGLVQQL 347
           + A NF+ I L   LV   N+ P    LFP  PPFIF    GL  ++
Sbjct: 280 IIARNFDTIRLSFQLVRPPNMTPAVANLFPQAPPFIFHATVGLTLRI 326

>LAMC1_DROME (P15215) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1639

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/77 (23%), Positives = 30/77 (38%)
 Frame = -2

Query: 365  RSEKDAELLYEARDSIKDEGRMTREQYAALRRKIGGTYKDFFKSXXXXXXXXXXXXXXDK 186
            ++ KDAEL+    +  K   R  RE+   L  ++  T  D FK                +
Sbjct: 1466 QASKDAELIRRKANETKVAARNLREEADQLNHRVKLTEMDIFKLEESSTKDDNLVDDAKR 1525

Query: 185  TCKVCKKDTRGEPRQVD 135
                 K DT+   +Q++
Sbjct: 1526 KVGQAKADTQEAQKQIE 1542

>CYB_SMIOO (Q9XP77) Cytochrome b|
          Length = 381

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/70 (34%), Positives = 28/70 (40%)
 Frame = +3

Query: 186 LVHPTFLHVFAINFNI*LEEILVGATNLPPKRCILFPCHPPFIFDGIPGLVQQLRVLLRP 365
           LVH TFLH    N  + +           P  C   P HP +    I GL+  L VLL  
Sbjct: 194 LVHLTFLHETGSNNPLGI-----------PSDCDKIPFHPYYSIKDILGLMFLLLVLLSL 242

Query: 366 DLREVQRLGD 395
            L     LGD
Sbjct: 243 ALFSPDLLGD 252

>GRP3_DAUCA (P37705) Glycine-rich protein A3|
          Length = 195

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -1

Query: 396 HHRGAGLLAGPVGEGRGAAVRGQGFH 319
           HH G G +AG V  GR AA    G H
Sbjct: 94  HHSGHGGVAGMVAGGRAAAAAAYGVH 119

>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 326 PWPRTAAPRPSPTGPARSPAP 388
           P P   AP+P P  P++SP P
Sbjct: 157 PKPHAPAPKPKPGAPSKSPKP 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,081,363
Number of Sequences: 219361
Number of extensions: 1248448
Number of successful extensions: 4851
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4825
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)