| Clone Name | rbaal41i04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5910 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 5888 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 5829 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 5828 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 5769
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein mRNA, partial cds Length = 2727 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 2705 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 2646 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 2645 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 2586
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 99.6 bits (50), Expect = 7e-18 Identities = 99/116 (85%) Strand = Plus / Plus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 30517862 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 30517921 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||||||||||| |||||||||| |||||||| || ||||| | |||||||| Sbjct: 30517922 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 30517977 Score = 75.8 bits (38), Expect = 1e-10 Identities = 69/80 (86%) Strand = Plus / Plus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 |||||||| || || ||||||||||||||||||||||||| || |||||||||| || Sbjct: 4077967 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 4078026 Query: 376 acgaacgggaaccacnccag 395 ||||| ||||||||| |||| Sbjct: 4078027 acgaaggggaaccacgccag 4078046
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 35822611 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 35822552 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 35822551 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 35822492 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacactactactactaca 82 |||||||||||||||||||| Sbjct: 4771226 catacactactactactaca 4771245
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 99.6 bits (50), Expect = 7e-18 Identities = 99/116 (85%) Strand = Plus / Plus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 16425 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 16484 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||||||||||| |||||||||| |||||||| || ||||| | |||||||| Sbjct: 16485 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 16540
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 99.6 bits (50), Expect = 7e-18 Identities = 99/116 (85%) Strand = Plus / Plus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 155223 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 155282 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||||||||||| |||||||||| |||||||| || ||||| | |||||||| Sbjct: 155283 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 155338
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 13157 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 13098 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 13097 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 13038
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 93326 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 93267 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 93266 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 93207
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full insert sequence Length = 1292 Score = 99.6 bits (50), Expect = 7e-18 Identities = 102/120 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 915 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 856 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgatc 405 ||||||||||| | |||||||||| || || ||||||||||| | |||||||||||| Sbjct: 855 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 796
>ref|NM_193211.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5634 Score = 97.6 bits (49), Expect = 3e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 5597 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 5538 Query: 367 aactnagacacgaacgggaaccac 390 |||| || ||||| ||||||||| Sbjct: 5537 aactcggagacgaaggggaaccac 5514
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 3e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 19299761 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 19299820 Query: 367 aactnagacacgaacgggaaccac 390 |||| || ||||| ||||||||| Sbjct: 19299821 aactcggagacgaaggggaaccac 19299844 Score = 95.6 bits (48), Expect = 1e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 19254716 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 19254775 Query: 367 aactnagacacgaacgggaacca 389 |||| |||||||| |||||||| Sbjct: 19254776 aactcggacacgaaggggaacca 19254798
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 97.6 bits (49), Expect = 3e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 119382 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 119441 Query: 367 aactnagacacgaacgggaaccac 390 |||| || ||||| ||||||||| Sbjct: 119442 aactcggagacgaaggggaaccac 119465 Score = 95.6 bits (48), Expect = 1e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 74337 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 74396 Query: 367 aactnagacacgaacgggaacca 389 |||| |||||||| |||||||| Sbjct: 74397 aactcggacacgaaggggaacca 74419
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 97.6 bits (49), Expect = 3e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 27766 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 27825 Query: 367 aactnagacacgaacgggaaccac 390 |||| || ||||| ||||||||| Sbjct: 27826 aactcggagacgaaggggaaccac 27849
>ref|NM_193203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1809 Score = 95.6 bits (48), Expect = 1e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 1617 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 1558 Query: 367 aactnagacacgaacgggaacca 389 |||| |||||||| |||||||| Sbjct: 1557 aactcggacacgaaggggaacca 1535
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA, partial cds Length = 481 Score = 89.7 bits (45), Expect = 7e-15 Identities = 100/119 (84%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 |||||||||||||| || || ||||| | ||||||||||| || | |||||| |||||| Sbjct: 472 cggtccttcttgtggccgccgaggatacgggagatctgcaggcctctgctgaacgcctgg 413 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgcgat 404 ||||| ||||||| |||||||||| ||||| || ||||||||| | ||||||||||| Sbjct: 412 ttgaaaagcatcctggtctggaactcggacacaaaggggaaccacgcaaggaacgcgat 354
>dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F01, full insert sequence Length = 1923 Score = 89.7 bits (45), Expect = 7e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 307 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 366 |||||||| ||||||||||| || ||||||||||||||| ||||||||| ||||||||| Sbjct: 1665 aggatcctggagatctgcagcccccggctgaaggcctggctgaagagcagccgagtctga 1606 Query: 367 aactnagacacgaacgggaaccac 390 |||| || ||||| ||||||||| Sbjct: 1605 aactcggagacgaaggggaaccac 1582
>gb|AY108207.1| Zea mays PCO082315 mRNA sequence Length = 1199 Score = 89.7 bits (45), Expect = 7e-15 Identities = 89/104 (85%) Strand = Plus / Minus Query: 286 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 345 ||||| |||||||| || |||||||| | |||||||||||||| | |||||| |||||| Sbjct: 874 cggtctttcttgtgtcctcccaggatacgggagatctgcagacctctgctgaacgcctgg 815 Query: 346 ttgaagagcatccgagtctggaactnagacacgaacgggaacca 389 ||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 814 ttgaacagcatcctggtctggaattccgacacgaacgggaacca 771
>gb|AY107727.1| Zea mays PCO075555 mRNA sequence Length = 2352 Score = 79.8 bits (40), Expect = 6e-12 Identities = 113/138 (81%) Strand = Plus / Minus Query: 268 tccttgctccgcgccgcccggtccttcttgtgcccacccaggatcctcgagatctgcaga 327 |||||| |||| || |||||||| |||||||| || || ||||| | || ||||||||| Sbjct: 2109 tccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgcaga 2050 Query: 328 ccacggctgaaggcctggttgaagagcatccgagtctggaactnagacacgaacgggaac 387 || | ||||||||||||||||| ||||||| |||||||||| || || ||||||||| Sbjct: 2049 cctctactgaaggcctggttgaacagcatccttgtctggaactccgaaacaaacgggaac 1990 Query: 388 cacnccaggaacgcgatc 405 || | ||||| |||||| Sbjct: 1989 caagcgaggaatgcgatc 1972
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 75.8 bits (38), Expect = 1e-10 Identities = 69/80 (86%) Strand = Plus / Plus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 |||||||| || || ||||||||||||||||||||||||| || |||||||||| || Sbjct: 121620 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 121679 Query: 376 acgaacgggaaccacnccag 395 ||||| ||||||||| |||| Sbjct: 121680 acgaaggggaaccacgccag 121699
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 75.8 bits (38), Expect = 1e-10 Identities = 69/80 (86%) Strand = Plus / Plus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 |||||||| || || ||||||||||||||||||||||||| || |||||||||| || Sbjct: 11226 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 11285 Query: 376 acgaacgggaaccacnccag 395 ||||| ||||||||| |||| Sbjct: 11286 acgaaggggaaccacgccag 11305
>gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan synthase 12 (GSL12) mRNA, partial cds Length = 527 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%) Strand = Plus / Minus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 ||||||| ||||||||||||||||||||||||||| || || || | ||||||| ||| Sbjct: 288 gagatctccagaccacggctgaaggcctggttgaacaggatgcgcgactggaacgtggac 229 Query: 376 acgaacgggaaccac 390 || || ||||||||| Sbjct: 228 acaaaggggaaccac 214
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA, complete cds Length = 5772 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 318 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagacac 377 |||||| ||||||||||| ||||| || |||||||| | || |||||||||| ||| || Sbjct: 5736 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5677 Query: 378 gaacgggaaccac 390 ||| ||||||||| Sbjct: 5676 gaaagggaaccac 5664
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds Length = 5950 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 318 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagacac 377 |||||| ||||||||||| ||||| || |||||||| | || |||||||||| ||| || Sbjct: 5889 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5830 Query: 378 gaacgggaaccac 390 ||| ||||||||| Sbjct: 5829 gaaagggaaccac 5817
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete sequence Length = 102585 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 318 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagacac 377 |||||| ||||||||||| ||||| || |||||||| | || |||||||||| ||| || Sbjct: 96525 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 96466 Query: 378 gaacgggaaccac 390 ||| ||||||||| Sbjct: 96465 gaaagggaaccac 96453
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 318 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagacac 377 |||||| ||||||||||| ||||| || |||||||| | || |||||||||| ||| || Sbjct: 14323 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 14264 Query: 378 gaacgggaaccac 390 ||| ||||||||| Sbjct: 14263 gaaagggaaccac 14251
>tpg|BK001470.1| TPA: TPA_exp: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds Length = 5772 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 318 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagacac 377 |||||| ||||||||||| ||||| || |||||||| | || |||||||||| ||| || Sbjct: 5736 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5677 Query: 378 gaacgggaaccac 390 ||| ||||||||| Sbjct: 5676 gaaagggaaccac 5664
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds Length = 5880 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 343 tggttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||| |||||||| | ||||| |||| |||||||||||||||||| |||||||||| Sbjct: 5801 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 5743
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Plus Query: 343 tggttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||| |||||||| | ||||| |||| |||||||||||||||||| |||||||||| Sbjct: 89423 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 89481
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase, complete cds, clone: RAFL16-92-B13 Length = 2390 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 343 tggttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||| |||||||| | ||||| |||| |||||||||||||||||| |||||||||| Sbjct: 2191 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 2133
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/59 (84%) Strand = Plus / Minus Query: 343 tggttgaagagcatccgagtctggaactnagacacgaacgggaaccacnccaggaacgc 401 ||||| |||||||| | ||||| |||| |||||||||||||||||| ||||| |||| Sbjct: 1237 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccagggacgc 1179
>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence Length = 189789 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactactga 175 |||||||||||||||||||||| Sbjct: 134516 atacatacatacatactactga 134537
>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence Length = 221545 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactactga 175 |||||||||||||||||||||| Sbjct: 160852 atacatacatacatactactga 160831
>gb|AF304372.2| Nicotiana alata putative beta-1,3-glucan synthase (Gsl1) mRNA, complete cds Length = 6266 Score = 44.1 bits (22), Expect = 0.35 Identities = 48/57 (84%) Strand = Plus / Minus Query: 333 gctgaaggcctggttgaagagcatccgagtctggaactnagacacgaacgggaacca 389 |||||| ||||||||||| |||| || |||||||||| ||| || || |||||||| Sbjct: 5964 gctgaaagcctggttgaaaagcagccttgtctggaactcagagacaaatgggaacca 5908
>dbj|AK046085.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230341A15 product:unclassifiable, full insert sequence Length = 2456 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactactga 175 |||||||||||||||||||||| Sbjct: 532 atacatacatacatactactga 553
>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence Length = 223470 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactactga 175 |||||||||||||||||||||| Sbjct: 71741 atacatacatacatactactga 71762
>emb|AL353194.13| Human DNA sequence from clone RP11-119B16 on chromosome 20 Contains the 3' end of the gene for a novel protein (KIAA1271), a novel gene, the 5' end of PANK2 gene for Pantothenate kinase 2 (Hallervorden-Spatz syndrome) and a CpG island, complete sequence Length = 56570 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactactg 174 |||||||||||||||||||||| Sbjct: 24949 aatacatacatacatactactg 24970
>emb|CT033787.9| Mouse DNA sequence from clone RP24-86C3 on chromosome 12, complete sequence Length = 194345 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactactga 175 |||||||||||||||||||||| Sbjct: 64228 atacatacatacatactactga 64249
>gb|DQ112034.1| Perna viridis clone PV104 microsatellite sequence Length = 286 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 ctggaatacatacatacatac 169 ||||||||||||||||||||| Sbjct: 74 ctggaatacatacatacatac 54
>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence Length = 179087 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 ctggaatacatacatacatac 169 ||||||||||||||||||||| Sbjct: 98070 ctggaatacatacatacatac 98050
>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence Length = 200913 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatact 170 ||||||||||||||||||||| Sbjct: 76567 tggaatacatacatacatact 76587
>gb|AC122794.3| Mus musculus BAC clone RP24-202L5 from chromosome 8, complete sequence Length = 157120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 aatacatacatacatactact 173 ||||||||||||||||||||| Sbjct: 42439 aatacatacatacatactact 42419
>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence Length = 173444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatact 170 ||||||||||||||||||||| Sbjct: 112504 tggaatacatacatacatact 112524
>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24, complete sequence Length = 175626 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactact 173 ||||||||||||||||||||| Sbjct: 89905 aatacatacatacatactact 89925
>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete sequence Length = 209779 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 caatctatccatctacctatc 266 ||||||||||||||||||||| Sbjct: 74263 caatctatccatctacctatc 74283
>gb|AC118343.1| Homo sapiens chromosome 19 clone LLNLR-234A10, complete sequence Length = 36965 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 cagcctggaatacatacatacatac 169 ||||||||| ||||||||||||||| Sbjct: 17603 cagcctggactacatacatacatac 17627
>gb|AC104657.2| Homo sapiens BAC clone RP11-567F17 from 4, complete sequence Length = 126525 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ggaatacatacatacatacta 171 ||||||||||||||||||||| Sbjct: 79494 ggaatacatacatacatacta 79474
>gb|AC092313.2| Homo sapiens chromosome 19 clone LLNLR-293G8, complete sequence Length = 38582 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 cagcctggaatacatacatacatac 169 ||||||||| ||||||||||||||| Sbjct: 32693 cagcctggactacatacatacatac 32669
>gb|AC093234.2| Homo sapiens chromosome 19 clone LLNLR-266A8, complete sequence Length = 36965 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 cagcctggaatacatacatacatac 169 ||||||||| ||||||||||||||| Sbjct: 17603 cagcctggactacatacatacatac 17627
>emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-306B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188736 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 ctggaatacatacatacatac 169 ||||||||||||||||||||| Sbjct: 15241 ctggaatacatacatacatac 15261
>gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, complete sequence Length = 183137 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 cagcctggaatacatacatacatac 169 ||||||||| ||||||||||||||| Sbjct: 56493 cagcctggactacatacatacatac 56469
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds Length = 5802 Score = 40.1 bits (20), Expect = 5.4 Identities = 61/75 (81%) Strand = Plus / Minus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 |||||||||||||| || |||||||| || || || || | | ||| ||||||| |||| Sbjct: 5753 gagatctgcagaccgcgactgaaggcttgattaaacagtaatctagtttggaactcagac 5694 Query: 376 acgaacgggaaccac 390 || || ||||||||| Sbjct: 5693 acaaatgggaaccac 5679
>gb|AY293806.1| Paraurostyla weissei macronuclear DNA polymerase alpha gene, complete cds Length = 4746 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atcaccaatatcagataagt 58 |||||||||||||||||||| Sbjct: 3644 atcaccaatatcagataagt 3625
>gb|AY293805.1| Paraurostyla weissei micronuclear DNA polymerase alpha gene, complete sequence Length = 6930 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atcaccaatatcagataagt 58 |||||||||||||||||||| Sbjct: 5432 atcaccaatatcagataagt 5413
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 139196 atacatacatacatactact 139215
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 201849 tggaatacatacatacatac 201868
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 175381 aatacatacatacatactac 175400
>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gcatacactactactactac 81 |||||||||||||||||||| Sbjct: 98846 gcatacactactactactac 98827
>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence Length = 217836 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cttcttgtgcccacccagga 310 |||||||||||||||||||| Sbjct: 121261 cttcttgtgcccacccagga 121242
>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence Length = 183596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cttcttgtgcccacccagga 310 |||||||||||||||||||| Sbjct: 58031 cttcttgtgcccacccagga 58012
>gb|AC140387.2| Mus musculus BAC clone RP24-185D21 from chromosome 9, complete sequence Length = 158741 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caatctatccatctacctat 265 |||||||||||||||||||| Sbjct: 46130 caatctatccatctacctat 46149
>gb|AY915763.1| Schistosoma japonicum SJCHGC09682 protein mRNA, partial cds Length = 2231 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gaatacatacatacatacta 171 |||||||||||||||||||| Sbjct: 1974 gaatacatacatacatacta 1955
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 108743 atacatacatacatactact 108724
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 85717 aatacatacatacatactac 85736
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tacattgccaatgcaatttg 144 |||||||||||||||||||| Sbjct: 122349 tacattgccaatgcaatttg 122368
>gb|AC133607.3| Mus musculus BAC clone RP23-153N7 from chromosome 18, complete sequence Length = 223708 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 atactactgacaagccacaa 185 |||||||||||||||||||| Sbjct: 164472 atactactgacaagccacaa 164453
>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence Length = 205900 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 23073 atacatacatacatactact 23054
>gb|AC132085.3| Mus musculus BAC clone RP24-550M24 from chromosome 13, complete sequence Length = 150362 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 72259 atacatacatacatactact 72240
>gb|AC122530.3| Mus musculus BAC clone RP24-531C7 from chromosome 7, complete sequence Length = 141027 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctggaatacatacatacata 168 |||||||||||||||||||| Sbjct: 137888 ctggaatacatacatacata 137907
>gb|AC123801.4| Mus musculus BAC clone RP24-374A1 from chromosome 15, complete sequence Length = 150979 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 43696 atacatacatacatactact 43677
>gb|AC123823.3| Mus musculus BAC clone RP24-63C11 from chromosome 7, complete sequence Length = 185494 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ctggaatacatacatacata 168 |||||||||||||||||||| Sbjct: 157772 ctggaatacatacatacata 157753
>gb|AC136903.6| Mus musculus chromosome 9, clone RP23-475J16, complete sequence Length = 180530 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caatctatccatctacctat 265 |||||||||||||||||||| Sbjct: 171907 caatctatccatctacctat 171926
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 184170 atacatacatacatactact 184151
>gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome 6, complete sequence Length = 193181 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 63893 tggaatacatacatacatac 63912
>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence Length = 196584 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 79064 tggaatacatacatacatac 79045
>emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in linkage group 2, complete sequence Length = 231384 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 acaagccacaaccgctacag 194 |||||||||||||||||||| Sbjct: 74417 acaagccacaaccgctacag 74398
>emb|AL354747.12| Human DNA sequence from clone RP11-362D13 on chromosome 10, complete sequence Length = 84615 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 8296 tggaatacatacatacatac 8277
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaagtacacaagttataagt 35 |||||||||||||||||||| Sbjct: 95164 aaagtacacaagttataagt 95145
>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence Length = 175873 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 113943 aatacatacatacatactac 113962
>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research Institute) complete sequence Length = 218874 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 105494 tggaatacatacatacatac 105513
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtccttcttgtgcccaccc 306 |||||||||||||||||||| Sbjct: 60148 ggtccttcttgtgcccaccc 60167
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tccttgctccgcgccgcccg 287 |||||||||||||||||||| Sbjct: 16687 tccttgctccgcgccgcccg 16668
>emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 in linkage group 4 Contains the gene for a novel protein similar to vertebrate mitochondrial ribosomal protein S18A (MRPS18A) and two novel genes, complete sequence Length = 74769 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 tctatccatctacctatcgt 268 |||||||||||||||||||| Sbjct: 42978 tctatccatctacctatcgt 42959
>gb|DQ099285.1| Arachis hypogaea clone Ah-408 microsatellite sequence Length = 364 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 acactactactactacaaac 85 |||||||||||||||||||| Sbjct: 168 acactactactactacaaac 187
>gb|AC099789.2| Homo sapiens chromosome 1 clone RP11-377K22, complete sequence Length = 174162 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ctggaatacatacatacata 168 |||||||||||||||||||| Sbjct: 102513 ctggaatacatacatacata 102494
>gb|AF238375.3| Homo sapiens chromosome 21 clone BAC 49B5 map 21q21, complete sequence Length = 166124 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 88742 aatctatccatctacctatc 88761
>gb|DQ205696.1| Etheostoma caeruleum clone Eca22EPA microsatellite sequence Length = 435 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 atctatccatctacctatcg 267 |||||||||||||||||||| Sbjct: 155 atctatccatctacctatcg 136
>gb|AC069411.21| Homo sapiens 3 BAC RP11-609K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156733 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 108150 aatacatacatacatactac 108169
>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence Length = 211156 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 177474 tggaatacatacatacatac 177493
>gb|AC154485.2| Mus musculus BAC clone RP24-117M9 from chromosome 12, complete sequence Length = 154864 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 138295 tggaatacatacatacatac 138276
>dbj|AK039876.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430024G23 product:unclassifiable, full insert sequence Length = 1771 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 1015 atacatacatacatactact 1034
>dbj|AK047258.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930042M10 product:unclassifiable, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tccttgctccgcgccgcccg 287 |||||||||||||||||||| Sbjct: 186 tccttgctccgcgccgcccg 205
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 14196 atacatacatacatactact 14177
>gb|AC157089.5| Mus musculus 10 BAC RP24-339G14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160723 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 31172 aatctatccatctacctatc 31191
>gb|AC138744.4| Homo sapiens chromosome 17, clone RP11-859E19, complete sequence Length = 177325 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 aaagtacacaagttataagtacaa 39 ||||||||||||||| |||||||| Sbjct: 39367 aaagtacacaagttacaagtacaa 39390
>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 152575 aatctatccatctacctatc 152556
>gb|AC126614.8| Homo sapiens 12 BAC RP11-756H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147545 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 22751 aatacatacatacatactac 22732
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 40.1 bits (20), Expect = 5.4 Identities = 61/75 (81%) Strand = Plus / Plus Query: 316 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactnagac 375 |||||||||||||| || |||||||| || || || || | | ||| ||||||| |||| Sbjct: 65013 gagatctgcagaccgcgactgaaggcttgattaaacagtaatctagtttggaactcagac 65072 Query: 376 acgaacgggaaccac 390 || || ||||||||| Sbjct: 65073 acaaatgggaaccac 65087
>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence Length = 150913 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cttcttgtgcccacccagga 310 |||||||||||||||||||| Sbjct: 96584 cttcttgtgcccacccagga 96603
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 53711 tggaatacatacatacatac 53692
>gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183168 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 130698 aatacatacatacatactac 130679
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacactactactactaca 82 |||||||||||||||||||| Sbjct: 51816 catacactactactactaca 51835
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacactactactactaca 82 |||||||||||||||||||| Sbjct: 13385 catacactactactactaca 13404
>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete sequence Length = 115038 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 59515 atacatacatacatactact 59496
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 203115 aatctatccatctacctatc 203134
>emb|CR937049.3| CH230-323M7, complete sequence Length = 198674 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 156062 tggaatacatacatacatac 156081
>emb|CR925800.7| Zebrafish DNA sequence from clone ZFOS-476E6 in linkage group 4, complete sequence Length = 19867 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 acaagccacaaccgctacag 194 |||||||||||||||||||| Sbjct: 16558 acaagccacaaccgctacag 16577
>emb|AL356804.4|CNS05TDM Human chromosome 14 DNA sequence BAC R-718G2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185015 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 179630 tggaatacatacatacatac 179649
>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence Length = 222413 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 80566 aatacatacatacatactac 80585
>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 276309 aatctatccatctacctatc 276328
>gb|AC132224.3| Mus musculus BAC clone RP24-554P12 from 1, complete sequence Length = 154996 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 2748 tggaatacatacatacatac 2767
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aatacatacatacatactac 172 |||||||||||||||||||| Sbjct: 194842 aatacatacatacatactac 194823
>gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complete sequence Length = 152261 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 96781 tggaatacatacatacatac 96762
>emb|BX927192.15| Zebrafish DNA sequence from clone DKEY-56M20 in linkage group 5, complete sequence Length = 152997 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 acaagccacaaccgctacag 194 |||||||||||||||||||| Sbjct: 31182 acaagccacaaccgctacag 31163
>emb|AL935132.13| Mouse DNA sequence from clone RP23-8G23 on chromosome 2, complete sequence Length = 165444 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 95586 tggaatacatacatacatac 95605
>emb|AL672051.14| Mouse DNA sequence from clone RP23-332O3 on chromosome X, complete sequence Length = 163949 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 85398 tggaatacatacatacatac 85379
>emb|AL672271.9| Mouse DNA sequence from clone RP23-450H23 on chromosome X, complete sequence Length = 196613 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 88630 tggaatacatacatacatac 88611
>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete sequence Length = 81776 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 26253 atacatacatacatactact 26234
>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete sequence Length = 213549 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 205978 tggaatacatacatacatac 205959
>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete sequence Length = 188425 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atacatacatacatactact 173 |||||||||||||||||||| Sbjct: 51937 atacatacatacatactact 51918
>emb|AL732619.13| Mouse DNA sequence from clone RP23-122I3 on chromosome 4, complete sequence Length = 225086 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tggaatacatacatacatac 169 |||||||||||||||||||| Sbjct: 87546 tggaatacatacatacatac 87527
>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1, LL56-APP region, complete sequence Length = 204699 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aatctatccatctacctatc 266 |||||||||||||||||||| Sbjct: 20730 aatctatccatctacctatc 20749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,331,405 Number of Sequences: 3902068 Number of extensions: 3331405 Number of successful extensions: 352048 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 350757 Number of HSP's gapped (non-prelim): 1293 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)