ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41i03 |
|---|---|
| Clone Library Name | barley_pub |
>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) (ALDP) Length = 388 Score = 61.6 bits (148), Expect = 4e-10 Identities = 30/33 (90%), Positives = 30/33 (90%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAKANSLAQLGKYTSDGEAA AKE MFVKNY Y Sbjct: 356 RAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388
>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) (Fragment) Length = 356 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/33 (69%), Positives = 27/33 (81%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAK+NSLAQLGKY DGE+ AK+ +FVK YSY Sbjct: 324 RAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356
>ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) Length = 394 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = -2 Query: 396 AKANSLAQLGKYTSDGEAAAAKENMFVK 313 AK+NSLAQLGKYT +GE+ K++MFVK Sbjct: 362 AKSNSLAQLGKYTGEGESEERKKDMFVK 389
>ALF1_CAEEL (P54216) Fructose-bisphosphate aldolase 1 (EC 4.1.2.13) (Aldolase| CE-1) (CE1) Length = 366 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA+ NSLA +GKYT D A AAA +++FV N+SY Sbjct: 333 RAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>ALDOA_PONPY (Q5NVR5) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA ANSLA GKYT G+A AAA E++FV N++Y Sbjct: 330 RALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALDOA_HUMAN (P04075) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Lung cancer antigen NY-LU-1) Length = 363 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA ANSLA GKYT G+A AAA E++FV N++Y Sbjct: 330 RALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALFD_PEA (Q01517) Fructose-bisphosphate aldolase 2, chloroplast (EC| 4.1.2.13) Length = 349 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAK+NSLAQLGKY DGE+ AK++ + YSY Sbjct: 318 RAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349
>ALDOA_RABIT (P00883) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA ANSLA GKYT G+A AAA E++F+ N++Y Sbjct: 330 RALANSLACQGKYTPSGQAGAAASESLFISNHAY 363
>ALDOA_RAT (P05065) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA ANSLA GKYT G++ AAA E++F+ N++Y Sbjct: 330 RALANSLACQGKYTPSGQSGAAASESLFISNHAY 363
>ALDOA_MOUSE (P05064) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Aldolase 1) Length = 363 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA ANSLA GKYT G++ AAA E++F+ N++Y Sbjct: 330 RALANSLACQGKYTPSGQSGAAASESLFISNHAY 363
>ALF2_CAEEL (P46563) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (Aldolase| CE-2) (CE2) Length = 366 Score = 37.0 bits (84), Expect = 0.011 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 R+KAN A LGKY + A AA E++FV +SY Sbjct: 334 RSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 357 Score = 35.0 bits (79), Expect = 0.043 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAK NS A LGKY A A E++ VK+Y Y Sbjct: 325 RAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357
>ALF1_LAMJA (P53445) Fructose-bisphosphate aldolase, muscle type (EC 4.1.2.13)| Length = 363 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAK N A G+Y G AAA E++FV N++Y Sbjct: 331 RAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>ALF_ECHMU (Q9GP32) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 363 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = -2 Query: 396 AKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 AKAN A LGK+ + + AA ++++FV N++Y Sbjct: 332 AKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>ALF1_PEA (P46256) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC| 4.1.2.13) Length = 357 Score = 33.5 bits (75), Expect = 0.13 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 R KANS A LGKY A E++ VK+Y Y Sbjct: 325 RCKANSEATLGKYGGGSGTGLASESLHVKDYKY 357
>ALF_MAIZE (P08440) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 355 Score = 33.1 bits (74), Expect = 0.16 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 R KANS A LG Y G+AAA E++ VK+Y Y Sbjct: 325 RCKANSEATLGTYK--GDAAADTESLHVKDYKY 355
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%) Frame = -3 Query: 386 TPWRSSASTPATVRPQLPKRTCSSRTTATDPSA---SCP 279 +P RSS ++PAT +PK+T S R PSA SCP Sbjct: 783 SPPRSSPASPATTPRTVPKKTASIRREFASPSASSSSCP 821
>ALF_CICAR (O65735) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 359 Score = 30.8 bits (68), Expect = 0.81 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGE-AAAAKENMFVKNYSY 301 RAKANS A LG Y + + A E++ VK+Y Y Sbjct: 326 RAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359
>ALF2_PEA (P46257) Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 (EC| 4.1.2.13) Length = 359 Score = 30.8 bits (68), Expect = 0.81 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYT-SDGEAAAAKENMFVKNYSY 301 RAKANS A LG Y + A A E++ VK+Y Y Sbjct: 326 RAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359
>ALF_DROME (P07764) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 360 Score = 30.8 bits (68), Expect = 0.81 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RAKAN A GKY + G A A ++FV N++Y Sbjct: 329 RAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 360
>ALF2_PLABA (P49577) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (ALDO-2)| Length = 358 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RA+ANSLA GKY + A +++ K Y Y Sbjct: 326 RAEANSLATYGKYKGGAGGSTAGASLYEKKYVY 358
>MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 856 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -3 Query: 395 PRPTPWRSSASTPATVRPQLPKRTCS-SRTTATDPS--ASCPIYIIYLRRE 252 P+PT +SS P P P+ CS S T++T S A C + +L+R+ Sbjct: 425 PQPTQAQSSGQGPLATSPSNPEAMCSDSETSSTSSSREAGCRAKLSWLQRK 475
>ALDOB_CHICK (P07341) Fructose-bisphosphate aldolase B (EC 4.1.2.13) (Liver-type| aldolase) Length = 363 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RA+ NSLA G+Y + G+ AA +++F +Y+Y Sbjct: 330 RAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 363
>ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC| 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGE-AAAAKENMFVKNYSY 301 R KANS A LG Y D A E++ VK+Y Y Sbjct: 325 RCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358
>THTPA_BOVIN (Q8MKF1) Thiamine-triphosphatase (EC 3.6.1.28) (ThTPase)| Length = 218 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +3 Query: 150 SPSISSIRAGLDL*QRRHTGW-LRCPQAAQGATSTLPP*VDYVDRTA 287 +P +S +RA L QR +GW L+CP GA P +Y + TA Sbjct: 41 TPELSLMRADYWLRQREGSGWELKCP----GAAGVSGPHTEYTELTA 83
>ALF_ARATH (P22197) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 358 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = -2 Query: 399 RAKANSLAQLGKYT--SDGEAAAAKENMFVKNYSY 301 R KAN A LGKYT + G++AA EN+ V Y Y Sbjct: 325 RCKANKDATLGKYTGWASGDSAAF-ENLVVIGYRY 358
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 Query: 398 APRPTPWRSSASTPATVRPQLPKRTCS 318 AP P+ S+S+P+ PQLP RT S Sbjct: 161 APSPSRTLPSSSSPSRATPQLPTRTAS 187
>ALF_PLAFA (P14223) Fructose-bisphosphate aldolase (EC 4.1.2.13) (41 kDa| antigen) Length = 369 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RA+ANSLA GKY A +++ K Y Y Sbjct: 337 RAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369
>ALF_PLAF7 (Q7KQL9) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 369 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 RA+ANSLA GKY A +++ K Y Y Sbjct: 337 RAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369
>IF2_RHOS4 (Q3IYN5) Translation initiation factor IF-2| Length = 836 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Frame = -3 Query: 398 APRPTPWRSSASTPATVRPQLP-------KRTCSSRTTATDPS 291 AP+P P S AS P + +P LP + RTT D S Sbjct: 162 APQPAPAESRASAPPSAKPGLPPSRKEREREADRDRTTKKDDS 204
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -3 Query: 374 SSASTPATVRPQLPKRTCSSRTTATDPSASCP 279 SSA PA +P PK S TTAT S P Sbjct: 129 SSAPKPAAPKPAAPKPAAQSSTTATPGSMPRP 160
>ALFC_CHLRE (Q42690) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) Length = 374 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 393 KANSLAQLGKYTSDGEAAAAKENMFVKNYSY 301 KANS AQ GKY + E A + M+ K Y Sbjct: 342 KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372
>ALDOB_SPAAU (P53447) Fructose-bisphosphate aldolase B (EC 4.1.2.13) (Liver-type| aldolase) Length = 363 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -2 Query: 399 RAKANSLAQLGKYTSDGEA-AAAKENMFVKNYSY 301 RAK N LA G+Y G A A++++++ +Y Y Sbjct: 330 RAKINGLASKGEYKPSGSADQASQQSLYTASYVY 363
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -3 Query: 395 PRPTPWRSSASTPATVRPQLPKRTCSSRTTATDPSASCP 279 P P P SSAS+P P P T R T PSA P Sbjct: 233 PAPRPPASSASSPQAAAPAAPSATRLPRRTT--PSAPRP 269
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = -3 Query: 398 APRPTPWRSSASTPATVRPQLPKRTCSSRTTATDPSASC 282 +P TP RSS+ P T PQ P SS T AT S+SC Sbjct: 1011 SPPSTPPRSSS--PVTSPPQSP---TSSATPATTASSSC 1044
>TRPD_SILPO (Q5LRH8) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 339 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 286 LADGSVAVVLDEHVLFGSCGLTVAGVLAELRQGVGLGA 399 L DG+ + D +L + L VA A+LR+GV L A Sbjct: 279 LLDGAPSAYRDAVLLNAAAALVVADRAADLREGVALAA 316
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -3 Query: 383 PWRSSASTPATVRPQLPKRTCSSRTTATDPSAS 285 P +S TP T QLP T + TTAT P+ + Sbjct: 45 PTSTSTQTPGTT--QLPSTTSTPTTTATQPTXT 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,419,206 Number of Sequences: 219361 Number of extensions: 900966 Number of successful extensions: 2546 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2538 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
