>Y1549_PHOLL (Q7N6K1) UPF0299 membrane protein plu1549|
          Length = 145

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 148 IFAYLSTGTSRHFXHISHRLHHIVFPCPIGSARIHSSILYLSYICHR 8
           +F  +  G   ++  +S ++  IVF C I +A +   + Y S+  HR
Sbjct: 76  LFLPIGVGVMNYYDQLSQQIIPIVFSCLISTAIVMIIVAYSSHYVHR 122

>PFA5_YEAST (Q03289) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 374

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 21  YDKYRIDECIRADPIGHGNTIWCSRCE 101
           YD     +C ++DP  HG  IWCS C+
Sbjct: 111 YDAVVPPKCYQSDP--HGYPIWCSECQ 135

>MTCY_LEUME (P38577) Bacteriocin mesentericin Y105 precursor|
          Length = 61

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 22/59 (37%), Positives = 30/59 (50%)
 Frame = +1

Query: 22  MINTESMSVYVRTQ*DMEIQYGVVGAKYGGNGETCRSTSTQKFIYYGSPSPAGHTRLAS 198
           M N +S+  Y   Q D +    VVG KY GNG  C  T +   + +G  + AG  RLA+
Sbjct: 1   MTNMKSVEAY--QQLDNQNLKKVVGGKYYGNGVHC--TKSGCSVNWGEAASAGIHRLAN 55

>YWZ5_CAEEL (Q11095) Hypothetical protein C02B8.5|
          Length = 453

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 75  NTIWCSRCEIWXKWRDVPVDKY 140
           N+ WC  C +  +WR +P D Y
Sbjct: 412 NSEWCGLCNLCWQWRKLPADYY 433

>RS13_IDILO (Q5QXV5) 30S ribosomal protein S13|
          Length = 118

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 120 DVPVDKYAKIYLLRLTVPGRTHTASILAAXGVVD 221
           +VP +K+A I L  +   GRT +  ILAA G+ +
Sbjct: 8   NVPDNKHAVIALTAIYGVGRTRSQQILAATGIAE 41

>GLGB_SOLTU (P30924) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch|
           branching enzyme) (Q-enzyme)
          Length = 861

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 69  HGNTIWCSRCEIWXKWRDVPVDKYAKIY 152
           HGN +W  R   W K+      K+A  Y
Sbjct: 213 HGNGVWVDRIPAWIKYATADATKFAAPY 240

>FER_THEAC (P00218) Zinc-containing ferredoxin|
          Length = 142

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 21  YDKYRIDECIRADPIGHGNTIWCSRCE 101
           ++KYR D+C   DP+   + I+C  CE
Sbjct: 107 WNKYRTDKC---DPVRESDCIFCMACE 130

>RHOC_MOUSE (Q62159) Rho-related GTP-binding protein RhoC precursor|
           (Silica-induced gene 61 protein) (SIG-61)
          Length = 193

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 95  VRNMXEMARRAGRQVRKN 148
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184

>RHOC_HUMAN (P08134) Rho-related GTP-binding protein RhoC precursor (H9)|
          Length = 193

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 95  VRNMXEMARRAGRQVRKN 148
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,265,508
Number of Sequences: 219361
Number of extensions: 607325
Number of successful extensions: 1553
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)