ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AP4S1_HUMAN (Q9Y587) AP-4 complex subunit sigma-1 (Adapter-relat... 90 5e-18
2AP4S1_MOUSE (Q9WVL1) AP-4 complex subunit sigma-1 (Adapter-relat... 89 9e-18
3AP3S2_PONPY (Q5RDP9) AP-3 complex subunit sigma-2 (Adapter-relat... 75 1e-13
4AP3S2_MOUSE (Q8BSZ2) AP-3 complex subunit sigma-2 (Adapter-relat... 75 1e-13
5AP3S2_HUMAN (P59780) AP-3 complex subunit sigma-2 (Adapter-relat... 75 1e-13
6AP1S2_HUMAN (P56377) AP-1 complex subunit sigma-2 (Adapter-relat... 73 7e-13
7AP1S2_MOUSE (Q9DB50) AP-1 complex subunit sigma-2 (Adapter-relat... 73 7e-13
8AP3S1_MOUSE (Q9DCR2) AP-3 complex subunit sigma-1 (Adapter-relat... 72 2e-12
9AP3S1_HUMAN (Q92572) AP-3 complex subunit sigma-1 (Adapter-relat... 72 2e-12
10AP1S1_MOUSE (P61967) AP-1 complex subunit sigma-1A (Adapter-rela... 71 2e-12
11AP1S1_HUMAN (P61966) AP-1 complex subunit sigma-1A (Adapter-rela... 71 2e-12
12AP1T1_YEAST (P35181) AP-1 complex subunit theta-1 (Theta(1)-adap... 70 3e-12
13AP2S_SCHPO (Q9Y7L6) AP-2 complex subunit sigma (Clathrin assembl... 70 3e-12
14AP1S3_MOUSE (Q7TN05) AP-1 complex subunit sigma-3 (Adapter-relat... 70 4e-12
15AP2S_EMENI (Q5BFF8) AP-2 complex subunit sigma (Clathrin assembl... 70 6e-12
16AP2S_ASPFU (Q4WS49) AP-2 complex subunit sigma (Clathrin assembl... 70 6e-12
17AP2S_GIBZE (Q4ICG5) AP-2 complex subunit sigma (Clathrin assembl... 69 8e-12
18AP1S3_HUMAN (Q96PC3) AP-1 complex subunit sigma-3 (Adapter-relat... 69 1e-11
19AP2S_NEUCR (Q7SAQ1) AP-2 complex subunit sigma (Clathrin assembl... 69 1e-11
20AP3S_SCHPO (Q09905) AP-3 complex subunit sigma (Adapter-related ... 60 3e-09
21AP2S_YEAST (Q00381) AP-2 complex subunit sigma (Clathrin assembl... 59 1e-08
22AP2S1_MAIZE (O50016) AP-2 complex subunit sigma-1 (Clathrin coat... 59 1e-08
23AP2S1_RAT (P62744) AP-2 complex subunit sigma-1 (Adapter-related... 58 2e-08
24AP2S1_PONPY (Q5R940) AP-2 complex subunit sigma-1 (Adapter-relat... 58 2e-08
25AP2S1_MOUSE (P62743) AP-2 complex subunit sigma-1 (Adapter-relat... 58 2e-08
26AP2S1_HUMAN (P53680) AP-2 complex subunit sigma-1 (Adapter-relat... 58 2e-08
27AP3S_ASHGO (Q75F71) AP-3 complex subunit sigma (Adapter-related ... 56 7e-08
28AP3S_YEAST (P47064) AP-3 complex subunit sigma (Adapter-related ... 56 9e-08
29AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assem... 38 0.019
30AP3M1_RAT (P53676) AP-3 complex subunit mu-1 (Adapter-related pr... 35 0.12
31AP3M1_MOUSE (Q9JKC8) AP-3 complex subunit mu-1 (Adapter-related ... 35 0.12
32AP3M1_HUMAN (Q9Y2T2) AP-3 complex subunit mu-1 (Adapter-related ... 35 0.12
33AP3M2_RAT (P53678) AP-3 complex subunit mu-2 (Adapter-related pr... 35 0.21
34AP3M2_MOUSE (Q8R2R9) AP-3 complex subunit mu-2 (Adapter-related ... 35 0.21
35AP3M2_HUMAN (P53677) AP-3 complex subunit mu-2 (Adapter-related ... 35 0.21
36AP2M_SCHPO (Q09718) AP-2 complex subunit mu (Probable clathrin c... 33 0.46
37RSC8_YEAST (P43609) Chromatin structure remodeling complex prote... 31 3.0
38VPS54_DROME (Q9VLC0) Vacuolar protein sorting protein 54 (Protei... 30 3.9
39KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-a... 30 3.9
40PROA_BACSK (Q5WH54) Gamma-glutamyl phosphate reductase (GPR) (EC... 29 8.6 
>AP4S1_HUMAN (Q9Y587) AP-4 complex subunit sigma-1 (Adapter-related protein|
           complex 4 sigma-1 subunit) (Sigma subunit of AP-4) (AP-4
           adapter complex sigma subunit)
          Length = 144

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 40/68 (58%), Positives = 55/68 (80%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           +NE+AI EFIH  VE +D +F  V ELDIMF+L+KVH +L+EMV+NGCIVET++  ILAP
Sbjct: 75  ENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAP 134

Query: 240 IQLMEKTS 217
           + +++K S
Sbjct: 135 LLILDKMS 142
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>AP4S1_MOUSE (Q9WVL1) AP-4 complex subunit sigma-1 (Adapter-related protein|
           complex 4 sigma-1 subunit) (Sigma subunit of AP-4) (AP-4
           adapter complex sigma subunit)
          Length = 144

 Score = 89.0 bits (219), Expect = 9e-18
 Identities = 40/68 (58%), Positives = 55/68 (80%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           +NE+AI EFIH  VE +D +F  V ELDIMF+L+KVH +L+EMV+NGCIVET++  ILAP
Sbjct: 75  ENEMAIYEFIHNFVEVLDGYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAP 134

Query: 240 IQLMEKTS 217
           + +++K S
Sbjct: 135 LLILDKLS 142
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>AP3S2_PONPY (Q5RDP9) AP-3 complex subunit sigma-2 (Adapter-related protein|
           complex 3 sigma-2 subunit) (Sigma-adaptin 3b) (AP-3
           complex sigma-3B subunit) (Sigma-3B-adaptin)
          Length = 193

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 31/66 (46%), Positives = 51/66 (77%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++EL IL+ I + VET+D+ F NVCELD++FH++KVH++L+E+VM G ++ET+   I+A 
Sbjct: 81  ESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQ 140

Query: 240 IQLMEK 223
           I+   +
Sbjct: 141 IEAQNR 146
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>AP3S2_MOUSE (Q8BSZ2) AP-3 complex subunit sigma-2 (Adapter-related protein|
           complex 3 sigma-2 subunit) (Sigma-adaptin 3b) (AP-3
           complex sigma-3B subunit) (Sigma-3B-adaptin)
          Length = 193

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 31/66 (46%), Positives = 51/66 (77%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++EL IL+ I + VET+D+ F NVCELD++FH++KVH++L+E+VM G ++ET+   I+A 
Sbjct: 81  ESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQ 140

Query: 240 IQLMEK 223
           I+   +
Sbjct: 141 IEAQNR 146
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>AP3S2_HUMAN (P59780) AP-3 complex subunit sigma-2 (Adapter-related protein|
           complex 3 sigma-2 subunit) (Sigma-adaptin 3b) (AP-3
           complex sigma-3B subunit) (Sigma-3B-adaptin)
          Length = 193

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 31/66 (46%), Positives = 51/66 (77%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++EL IL+ I + VET+D+ F NVCELD++FH++KVH++L+E+VM G ++ET+   I+A 
Sbjct: 81  ESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQ 140

Query: 240 IQLMEK 223
           I+   +
Sbjct: 141 IEAQNR 146
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>AP1S2_HUMAN (P56377) AP-1 complex subunit sigma-2 (Adapter-related protein|
           complex 1 sigma-1B subunit) (Sigma-adaptin 1B) (Adaptor
           protein complex AP-1 sigma-1B subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly
           protein complex
          Length = 157

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 32/61 (52%), Positives = 47/61 (77%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE IH  VE +D++FG+VCELDI+F+ EK +F+L+E ++ G + ETSK+N+L  I
Sbjct: 75  NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAI 134

Query: 237 Q 235
           +
Sbjct: 135 E 135
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>AP1S2_MOUSE (Q9DB50) AP-1 complex subunit sigma-2 (Adapter-related protein|
           complex 1 sigma-1B subunit) (Sigma-adaptin 1B) (Adaptor
           protein complex AP-1 sigma-1B subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly
           protein complex
          Length = 160

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 32/61 (52%), Positives = 47/61 (77%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE IH  VE +D++FG+VCELDI+F+ EK +F+L+E ++ G + ETSK+N+L  I
Sbjct: 75  NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAI 134

Query: 237 Q 235
           +
Sbjct: 135 E 135
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>AP3S1_MOUSE (Q9DCR2) AP-3 complex subunit sigma-1 (Adapter-related protein|
           complex 3 sigma-1 subunit) (Sigma-adaptin 3a) (AP-3
           complex sigma-3A subunit) (Sigma-3A-adaptin)
          Length = 193

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 32/66 (48%), Positives = 47/66 (71%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++EL IL+ I + VET+D+ F NVCELD++FH++KVH +L EMVM G ++ET+   I+  
Sbjct: 81  ESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQ 140

Query: 240 IQLMEK 223
           I    K
Sbjct: 141 IDAQNK 146
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>AP3S1_HUMAN (Q92572) AP-3 complex subunit sigma-1 (Adapter-related protein|
           complex 3 sigma-1 subunit) (Sigma-adaptin 3a) (AP-3
           complex sigma-3A subunit) (Sigma-3A-adaptin)
           (Clathrin-associated/assembly/adapter protein, small 3)
          Length = 193

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 32/66 (48%), Positives = 47/66 (71%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++EL IL+ I + VET+D+ F NVCELD++FH++KVH +L EMVM G ++ET+   I+  
Sbjct: 81  ESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQ 140

Query: 240 IQLMEK 223
           I    K
Sbjct: 141 IDAQNK 146
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>AP1S1_MOUSE (P61967) AP-1 complex subunit sigma-1A (Adapter-related protein|
           complex 1 sigma-1A subunit) (Sigma-adaptin 1A) (Adaptor
           protein complex AP-1 sigma-1A subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1A subunit) (Clathrin assembly
           protein complex
          Length = 158

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 31/61 (50%), Positives = 47/61 (77%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE IH  VE +D++FG+VCELDI+F+ EK +F+L+E +M G + +TSK+++L  I
Sbjct: 76  NELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAI 135

Query: 237 Q 235
           +
Sbjct: 136 E 136
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>AP1S1_HUMAN (P61966) AP-1 complex subunit sigma-1A (Adapter-related protein|
           complex 1 sigma-1A subunit) (Sigma-adaptin 1A) (Adaptor
           protein complex AP-1 sigma-1A subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1A subunit) (Clathrin assembly
           protein complex
          Length = 158

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 31/61 (50%), Positives = 47/61 (77%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE IH  VE +D++FG+VCELDI+F+ EK +F+L+E +M G + +TSK+++L  I
Sbjct: 76  NELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAI 135

Query: 237 Q 235
           +
Sbjct: 136 E 136
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>AP1T1_YEAST (P35181) AP-1 complex subunit theta-1 (Theta(1)-adaptin) (Clathrin|
           coat assembly protein AP19) (Clathrin coat-associated
           protein AP19) (Golgi adaptor AP-1 19 kDa adaptin) (HA1
           19 kDa subunit) (Clathrin assembly protein complex 1
           small chain)
          Length = 156

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVM-NGCIVETSKQNILAP 241
           NEL  LE IH  VETMD +FGNVCELDI+F+  KV+ +L EM+M +G I E+S++ +L  
Sbjct: 79  NELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMIMCDGSIAESSRKEVLHH 138

Query: 240 IQLME 226
           + +M+
Sbjct: 139 VTVMD 143
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>AP2S_SCHPO (Q9Y7L6) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain)
          Length = 143

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           N+LAILE IH  VE +D  FGNVCELD++F+  KV  +L+E+++ G I E++K+++L  I
Sbjct: 77  NDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKKSVLERI 136

Query: 237 QLMEK 223
           + +EK
Sbjct: 137 EALEK 141
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>AP1S3_MOUSE (Q7TN05) AP-1 complex subunit sigma-3 (Adapter-related protein|
           complex 1 sigma-1C subunit) (Sigma-adaptin 1C) (Adaptor
           protein complex AP-1 sigma-1C subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1C subunit) (Clathrin assembly
           protein complex
          Length = 154

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE +H  VE +D++FGNVCELDI+F+ EK +F+L+E ++ G I ETSK+  +  I
Sbjct: 76  NELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAI 135

Query: 237 Q 235
           +
Sbjct: 136 E 136
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>AP2S_EMENI (Q5BFF8) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain)
          Length = 145

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 33/65 (50%), Positives = 48/65 (73%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NELA LE IH  VE +D+ FGNVCELD++F+  KV+ +L+E+ + G I ETSKQ +L  +
Sbjct: 79  NELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRL 138

Query: 237 QLMEK 223
           + ++K
Sbjct: 139 EHLDK 143
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>AP2S_ASPFU (Q4WS49) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain)
          Length = 145

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 33/65 (50%), Positives = 48/65 (73%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NELA LE IH  VE +D+ FGNVCELD++F+  KV+ +L+E+ + G I ETSKQ +L  +
Sbjct: 79  NELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRL 138

Query: 237 QLMEK 223
           + ++K
Sbjct: 139 EHLDK 143
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>AP2S_GIBZE (Q4ICG5) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain)
          Length = 143

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 33/65 (50%), Positives = 47/65 (72%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NELA LE IH  VE +D  FGNVCELD++F+  KV+ +L+E+ + G I ETSKQ +L  +
Sbjct: 77  NELAFLEAIHFFVEVLDAFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRL 136

Query: 237 QLMEK 223
           + ++K
Sbjct: 137 EHLDK 141
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>AP1S3_HUMAN (Q96PC3) AP-1 complex subunit sigma-3 (Adapter-related protein|
           complex 1 sigma-1C subunit) (Sigma-adaptin 1C) (Adaptor
           protein complex AP-1 sigma-1C subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1C subunit) (Clathrin assembly
           protein complex
          Length = 154

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NEL  LE +H  VE +D++FGNVCELDI+F+ EK +F+L+E ++ G I ETSK+  +  I
Sbjct: 76  NELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAI 135

Query: 237 Q 235
           +
Sbjct: 136 E 136
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>AP2S_NEUCR (Q7SAQ1) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain)
          Length = 143

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 33/65 (50%), Positives = 47/65 (72%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           NELA LE IH  VE +D  FGNVCELD++F+  KV+ +L+E+ + G I ETSKQ +L  +
Sbjct: 77  NELAYLEAIHFFVEVLDSFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRL 136

Query: 237 QLMEK 223
           + ++K
Sbjct: 137 EHLDK 141
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>AP3S_SCHPO (Q09905) AP-3 complex subunit sigma (Adapter-related protein|
           complex 3 sigma subunit) (Sigma-adaptin 3A) (AP-3
           complex sigma3A subunit) (Sigma-adaptin)
           (Clathrin-associated/assembly/adapter protein, small 3)
          Length = 165

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETS-KQNILA 244
           ++EL IL+ I + VE +DR F NVCELD++F  +++H +L E+V  G ++ET+  + +LA
Sbjct: 79  ESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILAEVVSGGLVLETNLNEIVLA 138

Query: 243 PIQLMEKT 220
               M KT
Sbjct: 139 AQNQMPKT 146
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>AP2S_YEAST (Q00381) AP-2 complex subunit sigma (Clathrin assembly protein 2|
           small chain) (Adaptin small chain) (Clathrin coat
           assembly protein AP17) (Clathrin coat-associated protein
           AP17) (Plasma membrane adaptor AP-2 17 kDa protein)
          Length = 147

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = -1

Query: 393 IHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPIQLMEK 223
           IHL VE +D  FGNVCELDI+F+  KV+ +++EM + G I E SK  +L  + ++++
Sbjct: 89  IHLFVEVLDAFFGNVCELDIVFNFYKVYMIMDEMFIGGEIQEISKDMLLERLSILDR 145
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>AP2S1_MAIZE (O50016) AP-2 complex subunit sigma-1 (Clathrin coat assembly|
           protein AP17) (Clathrin coat-associated protein AP17)
           (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin
           assembly protein 2 small chain)
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKV--HFMLEEMVMNGCIVETSKQ 256
           NELA LE IHL VE +D  F NVCELD++F+  KV  + +L+E ++ G + ETSK+
Sbjct: 76  NELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYRYLILDEFILAGELQETSKR 131
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>AP2S1_RAT (P62744) AP-2 complex subunit sigma-1 (Adapter-related protein|
           complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin
           coat assembly protein AP17) (Clathrin coat-associated
           protein AP17) (Plasma membrane adaptor AP-2 17 kDa
           protein) (Clathrin a
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           N LA LE IH  VE ++ +F NVCELD++F+  KV+ +++EM + G I ETS+  +L  +
Sbjct: 76  NNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQL 135

Query: 237 QLME 226
            +++
Sbjct: 136 LMLQ 139
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>AP2S1_PONPY (Q5R940) AP-2 complex subunit sigma-1 (Adapter-related protein|
           complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin
           coat assembly protein AP17) (Clathrin coat-associated
           protein AP17) (Plasma membrane adaptor AP-2 17 kDa
           protein) (Clathrin
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           N LA LE IH  VE ++ +F NVCELD++F+  KV+ +++EM + G I ETS+  +L  +
Sbjct: 76  NNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQL 135

Query: 237 QLME 226
            +++
Sbjct: 136 LMLQ 139
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>AP2S1_MOUSE (P62743) AP-2 complex subunit sigma-1 (Adapter-related protein|
           complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin
           coat assembly protein AP17) (Clathrin coat-associated
           protein AP17) (Plasma membrane adaptor AP-2 17 kDa
           protein) (Clathrin
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           N LA LE IH  VE ++ +F NVCELD++F+  KV+ +++EM + G I ETS+  +L  +
Sbjct: 76  NNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQL 135

Query: 237 QLME 226
            +++
Sbjct: 136 LMLQ 139
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>AP2S1_HUMAN (P53680) AP-2 complex subunit sigma-1 (Adapter-related protein|
           complex 2 sigma-1 subunit) (Clathrin coat assembly
           protein AP17) (Clathrin coat-associated protein AP17)
           (Plasma membrane adaptor AP-2 17 kDa protein) (HA2 17
           kDa subunit) (Clathr
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 238
           N LA LE IH  VE ++ +F NVCELD++F+  KV+ +++EM + G I ETS+  +L  +
Sbjct: 76  NNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQL 135

Query: 237 QLME 226
            +++
Sbjct: 136 LMLQ 139
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>AP3S_ASHGO (Q75F71) AP-3 complex subunit sigma (Adapter-related protein|
           complex 3 sigma subunit) (Sigma-adaptin 3A) (AP-3
           complex sigma3A subunit) (Sigma-adaptin)
           (Clathrin-associated/assembly/adapter protein, small 3)
          Length = 185

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 25/68 (36%), Positives = 45/68 (66%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++ELAIL+ I   VE +DR F  V ELD++F+ + +  +LEE++  G ++ET+ + I+  
Sbjct: 89  ESELAILDLIQTFVEALDRCFAEVNELDLIFNWQTLESVLEEIIQGGMVIETNVKKIVET 148

Query: 240 IQLMEKTS 217
           +  + +TS
Sbjct: 149 VDELNRTS 156
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>AP3S_YEAST (P47064) AP-3 complex subunit sigma (Adapter-related protein|
           complex 3 sigma subunit) (Sigma-adaptin 3A) (AP-3
           complex sigma3A subunit) (Sigma-adaptin)
           (Clathrin-associated/assembly/adapter protein, small 3)
          Length = 194

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 26/68 (38%), Positives = 45/68 (66%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAP 241
           ++ELAIL+ I   VE++DR F  V ELD++F+ + +  +LEE+V  G ++ET+   I+A 
Sbjct: 93  ESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLESVLEEIVQGGMVIETNVNRIVAS 152

Query: 240 IQLMEKTS 217
           +  + K +
Sbjct: 153 VDELNKAA 160
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>AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assembly protein|
           AP47 homolog) (Clathrin coat-associated protein AP47
           homolog) (Golgi adaptor AP-1 47 kDa protein homolog)
           (HA1 47 kDa subunit homolog) (Clathrin assembly protein
           assembly protein
          Length = 418

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 21/55 (38%), Positives = 34/55 (61%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H + ET+  +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVAETLQDYFGECSEASIKDNVVIVYELLEEMLDNGFPLAT-ESNIL 130
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>AP3M1_RAT (P53676) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit) (Clathrin coat assembly protein AP47
           homolog 1) (Clathrin coat-associated protein AP47
           homolog 1) (Golgi ada
          Length = 418

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/55 (36%), Positives = 33/55 (60%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H + +T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLAT-ESNIL 130
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>AP3M1_MOUSE (Q9JKC8) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit)
          Length = 418

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/55 (36%), Positives = 33/55 (60%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H + +T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLAT-ESNIL 130
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>AP3M1_HUMAN (Q9Y2T2) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit)
          Length = 418

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/55 (36%), Positives = 33/55 (60%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H + +T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLAT-ESNIL 130
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>AP3M2_RAT (P53678) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa subu
          Length = 418

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 21/55 (38%), Positives = 34/55 (61%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H +V+T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLAT-ESNIL 130
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>AP3M2_MOUSE (Q8R2R9) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa su
          Length = 418

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 21/55 (38%), Positives = 34/55 (61%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H +V+T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLAT-ESNIL 130
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>AP3M2_HUMAN (P53677) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa su
          Length = 418

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 21/55 (38%), Positives = 34/55 (61%)
 Frame = -1

Query: 411 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 247
           L ++EF+H +V+T   +FG   E  I  ++  V+ +LEEM+ NG  + T + NIL
Sbjct: 77  LFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLAT-ESNIL 130
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>AP2M_SCHPO (Q09718) AP-2 complex subunit mu (Probable clathrin coat assembly|
           protein AP50) (Clathrin coat-associated protein AP50)
           (Plasma membrane adaptor AP-2 50 kDa protein) (Clathrin
           assembly protein complex 2 medium chain)
          Length = 446

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 16/58 (27%), Positives = 36/58 (62%)
 Frame = -1

Query: 417 NELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILA 244
           N + +LEF+  L++ +  +FG + E  +  ++  +  +L+EM+  G I++T++ + LA
Sbjct: 73  NVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEMIDYG-IIQTTEPDALA 129
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>RSC8_YEAST (P43609) Chromatin structure remodeling complex protein RSC8|
           (Remodel the structure of chromatin complex subunit 8)
           (SWI3 homolog)
          Length = 557

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -1

Query: 420 QNELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQ 256
           +++  I E + L +E ++  F  +C+L+    +EK+ ++ E   M    +  SKQ
Sbjct: 424 ESQAIIQELVKLTMEKLESKFTKLCDLETQLEMEKLKYVKESEKMLNDRLSLSKQ 478
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>VPS54_DROME (Q9VLC0) Vacuolar protein sorting protein 54 (Protein scattered)|
          Length = 940

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +2

Query: 242 GANMFCLLVSTMQPFITISSSMKCTFSRWNMMSSSHTLP-----KWRSMVSTRRCMNSR 403
           GA    LLV   QP+  +S+S+      +    S+H LP       R++V   RC NSR
Sbjct: 696 GAGNPVLLVEGKQPYTLVSASLMLIRMLYEYGCSAHRLPLLASYHARNVVDLLRCFNSR 754
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>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 207 CELKSA*VPLLCEEKCQTTA-VCMGGCVHPTGKCEMSC 97
           C   S+ V LLC   C++T  V +  C  PT  C+ SC
Sbjct: 230 CCRPSSSVSLLCHPVCRSTCCVPVSSCCAPTSSCQSSC 267
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>PROA_BACSK (Q5WH54) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 415

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 572 TEGVHQKTPFFIGVISVCIYNNATTELND 486
           TE + ++  FF  V + C+Y+NA+T   D
Sbjct: 344 TESLAERDTFFATVDAACVYHNASTRFTD 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,564,006
Number of Sequences: 219361
Number of extensions: 1446908
Number of successful extensions: 3975
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3973
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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